RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CETPP11597 493 aa20.02■□□□□ 0.8
SCLT1-204ENST00000503215 NSUN4Q96CB9 384 aaKnown RBP20.02■□□□□ 0.8
SCLT1-204ENST00000503215 NOP58Q9Y2X3 529 aaKnown RBP20.02■□□□□ 0.8
SCLT1-204ENST00000503215 HTTP42858 3142 aa20.01■□□□□ 0.79
SCLT1-204ENST00000503215 SP3Q02447 781 aa20.01■□□□□ 0.79
SCLT1-204ENST00000503215 PPATQ06203 517 aa20.01■□□□□ 0.79
SCLT1-204ENST00000503215 SNAPC2Q13487 334 aa20.01■□□□□ 0.79
SCLT1-204ENST00000503215 CEP85Q6P2H3 762 aa20.01■□□□□ 0.79
SCLT1-204ENST00000503215 ZSCAN29Q8IWY8 852 aaPredicted RBP20.01■□□□□ 0.79
SCLT1-204ENST00000503215 SLF2Q8IX21 1173 aa20.01■□□□□ 0.79
SCLT1-204ENST00000503215 GPR108Q9NPR9 543 aa20.01■□□□□ 0.79
SCLT1-204ENST00000503215 TLR7Q9NYK1 1049 aaKnown RBP20.01■□□□□ 0.79
SCLT1-204ENST00000503215 RAI14Q9P0K7 980 aa20.01■□□□□ 0.79
SCLT1-204ENST00000503215 UQCRFS1P1P0C7P4 283 aa20■□□□□ 0.79
SCLT1-204ENST00000503215 ERO1AQ96HE7 468 aa20■□□□□ 0.79
SCLT1-204ENST00000503215 ZFYVE28Q9HCC9 887 aa20■□□□□ 0.79
SCLT1-204ENST00000503215 MOGSQ13724 837 aa19.99■□□□□ 0.79
SCLT1-204ENST00000503215 NOL9Q5SY16 702 aaKnown RBP19.99■□□□□ 0.79
SCLT1-204ENST00000503215 EAF2Q96CJ1 260 aaPredicted RBP19.99■□□□□ 0.79
SCLT1-204ENST00000503215 CCDC8Q9H0W5 538 aaPredicted RBP19.99■□□□□ 0.79
SCLT1-204ENST00000503215 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.99■□□□□ 0.79
SCLT1-204ENST00000503215 DBNLQ9UJU6 430 aaKnown RBP19.99■□□□□ 0.79
SCLT1-204ENST00000503215 MAP3K10Q02779 954 aa19.98■□□□□ 0.79
SCLT1-204ENST00000503215 TTC39AQ5SRH9 613 aa19.98■□□□□ 0.79
SCLT1-204ENST00000503215 EFCC1Q9HA90 598 aa19.98■□□□□ 0.79
SCLT1-204ENST00000503215 LRP2BPQ9P2M1 347 aa19.98■□□□□ 0.79
SCLT1-204ENST00000503215 KCNH4Q9UQ05 1017 aa19.98■□□□□ 0.79
SCLT1-204ENST00000503215 PTPN22Q9Y2R2 807 aa19.98■□□□□ 0.79
SCLT1-204ENST00000503215 FAM196BA6NMK8 535 aa19.97■□□□□ 0.79
SCLT1-204ENST00000503215 CYP2E1P05181 493 aaPredicted RBP19.97■□□□□ 0.79
SCLT1-204ENST00000503215 ARHGAP39Q9C0H5 1083 aa19.97■□□□□ 0.79
SCLT1-204ENST00000503215 PIH1D3Q9NQM4 214 aaKnown RBP19.97■□□□□ 0.79
SCLT1-204ENST00000503215 EXOC6BQ9Y2D4 811 aa19.97■□□□□ 0.79
SCLT1-204ENST00000503215 ECM2O94769 699 aaPredicted RBP19.96■□□□□ 0.79
SCLT1-204ENST00000503215 LDHCP07864 332 aa19.96■□□□□ 0.79
SCLT1-204ENST00000503215 ZAP70P43403 619 aa19.96■□□□□ 0.79
SCLT1-204ENST00000503215 GSTO1P78417 241 aa19.96■□□□□ 0.79
SCLT1-204ENST00000503215 CCDC158Q5M9N0 1113 aa19.96■□□□□ 0.79
SCLT1-204ENST00000503215 ADGRA1Q86SQ6 560 aa19.96■□□□□ 0.79
SCLT1-204ENST00000503215 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
SCLT1-204ENST00000503215 SH3RF3Q8TEJ3 882 aaPredicted RBP19.96■□□□□ 0.79
SCLT1-204ENST00000503215 TNRC18O15417 2968 aaPredicted RBP19.96■□□□□ 0.79
SCLT1-204ENST00000503215 TLR2O60603 784 aa19.95■□□□□ 0.79
SCLT1-204ENST00000503215 SCYL3Q8IZE3 742 aa19.95■□□□□ 0.79
SCLT1-204ENST00000503215 NDUFB9Q9Y6M9 179 aa19.95■□□□□ 0.79
SCLT1-204ENST00000503215 ZHX2Q9Y6X8 837 aa19.95■□□□□ 0.79
SCLT1-204ENST00000503215 PDHXO00330 501 aa19.95■□□□□ 0.78
SCLT1-204ENST00000503215 PTPRAP18433 802 aa19.95■□□□□ 0.78
SCLT1-204ENST00000503215 GPAT2Q6NUI2 795 aa19.95■□□□□ 0.78
SCLT1-204ENST00000503215 CPA4Q9UI42 421 aa19.95■□□□□ 0.78
SCLT1-204ENST00000503215 COG6Q9Y2V7 657 aa19.95■□□□□ 0.78
SCLT1-204ENST00000503215 RRP1BQ14684 758 aaKnown RBP19.94■□□□□ 0.78
SCLT1-204ENST00000503215 NAA16Q6N069 864 aaPredicted RBP19.94■□□□□ 0.78
SCLT1-204ENST00000503215 ANKRD23Q86SG2 305 aa19.94■□□□□ 0.78
SCLT1-204ENST00000503215 TEX11Q8IYF3 940 aa19.94■□□□□ 0.78
SCLT1-204ENST00000503215 ZNF512BQ96KM6 892 aaPredicted RBP19.94■□□□□ 0.78
SCLT1-204ENST00000503215 ZCCHC17Q9NP64 241 aaKnown RBP19.94■□□□□ 0.78
SCLT1-204ENST00000503215 AATFQ9NY61 560 aaKnown RBP eCLIP19.94■□□□□ 0.78
SCLT1-204ENST00000503215 CENPFP49454 3210 aa19.94■□□□□ 0.78
SCLT1-204ENST00000503215 DOCK2Q92608 1830 aa19.93■□□□□ 0.78
SCLT1-204ENST00000503215 NPM3O75607 178 aaKnown RBP19.93■□□□□ 0.78
SCLT1-204ENST00000503215 CTGFP29279 349 aa19.93■□□□□ 0.78
SCLT1-204ENST00000503215 C17orf99Q6UX52 265 aa19.93■□□□□ 0.78
SCLT1-204ENST00000503215 SIRT2Q8IXJ6 389 aa19.93■□□□□ 0.78
SCLT1-204ENST00000503215 OSBPL5Q9H0X9 879 aaPredicted RBP19.93■□□□□ 0.78
SCLT1-204ENST00000503215 PICK1Q9NRD5 415 aa19.93■□□□□ 0.78
SCLT1-204ENST00000503215 AFG3L2Q9Y4W6 797 aa19.93■□□□□ 0.78
SCLT1-204ENST00000503215 ZSWIM8A7E2V4 1837 aa19.92■□□□□ 0.78
SCLT1-204ENST00000503215 POTEFA5A3E0 1075 aa19.92■□□□□ 0.78
SCLT1-204ENST00000503215 CXCL11O14625 94 aa19.92■□□□□ 0.78
SCLT1-204ENST00000503215 CTNND1O60716 968 aaKnown RBP19.92■□□□□ 0.78
SCLT1-204ENST00000503215 IL1RAPL2Q9NP60 686 aa19.92■□□□□ 0.78
SCLT1-204ENST00000503215 PTCH2Q9Y6C5 1203 aa19.92■□□□□ 0.78
SCLT1-204ENST00000503215 ADGRA2Q96PE1 1338 aa19.92■□□□□ 0.78
SCLT1-204ENST00000503215 MYO5AQ9Y4I1 1855 aaKnown RBP19.91■□□□□ 0.78
SCLT1-204ENST00000503215 TBC1D12O60347 775 aa19.91■□□□□ 0.78
SCLT1-204ENST00000503215 CYP2C8P10632 490 aa19.91■□□□□ 0.78
SCLT1-204ENST00000503215 LACTBP83111 547 aaPredicted RBP19.91■□□□□ 0.78
SCLT1-204ENST00000503215 AACSQ86V21 672 aa19.91■□□□□ 0.78
SCLT1-204ENST00000503215 ANTXR1Q9H6X2 564 aa19.91■□□□□ 0.78
SCLT1-204ENST00000503215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.91■□□□□ 0.78
SCLT1-204ENST00000503215 ZBTB40Q9NUA8 1239 aa19.91■□□□□ 0.78
SCLT1-204ENST00000503215 RCAN3Q9UKA8 241 aa19.91■□□□□ 0.78
SCLT1-204ENST00000503215 MAP4K4O95819 1239 aaPredicted RBP19.9■□□□□ 0.78
SCLT1-204ENST00000503215 PPP4CP60510 307 aa19.9■□□□□ 0.78
SCLT1-204ENST00000503215 DYNLL1P63167 89 aaKnown RBP19.9■□□□□ 0.78
SCLT1-204ENST00000503215 C20orf194Q5TEA3 1177 aa19.9■□□□□ 0.78
SCLT1-204ENST00000503215 PIAS4Q8N2W9 510 aaPredicted RBP19.9■□□□□ 0.78
SCLT1-204ENST00000503215 TGFBRAP1Q8WUH2 860 aa19.9■□□□□ 0.78
SCLT1-204ENST00000503215 ARMC5Q96C12 935 aa19.9■□□□□ 0.78
SCLT1-204ENST00000503215 PDE4DIPQ5VU43 2346 aa19.9■□□□□ 0.78
SCLT1-204ENST00000503215 KIAA0100Q14667 2235 aaKnown RBP19.89■□□□□ 0.78
SCLT1-204ENST00000503215 A0A0G2JLL6 359 aaPredicted RBP19.89■□□□□ 0.77
SCLT1-204ENST00000503215 TRIM75PA6NK02 468 aa19.89■□□□□ 0.77
SCLT1-204ENST00000503215 APBB1O00213 710 aa19.89■□□□□ 0.77
SCLT1-204ENST00000503215 PRRT2Q7Z6L0 340 aaPredicted RBP19.89■□□□□ 0.77
SCLT1-204ENST00000503215 MAPKAPK5Q8IW41 473 aa19.89■□□□□ 0.77
SCLT1-204ENST00000503215 CYP7A1P22680 504 aa19.88■□□□□ 0.77
SCLT1-204ENST00000503215 GADL1Q6ZQY3 521 aa19.88■□□□□ 0.77
SCLT1-204ENST00000503215 RHPN1Q8TCX5 695 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms