RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 ADORA1P30542 326 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 SNAPC2Q13487 334 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 KIF22Q14807 665 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 CCDC102BQ68D86 513 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
SNCA-207ENST00000502987 DZIP1Q86YF9 867 aaKnown RBP13.29□□□□□ -0.28
SNCA-207ENST00000502987 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 ZGPATQ8N5A5 531 aaKnown RBP13.29□□□□□ -0.28
SNCA-207ENST00000502987 NEUROD6Q96NK8 337 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 COPRSQ9NQ92 184 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 ABCF2Q9UG63 623 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 AKAP2Q9Y2D5 859 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 SNCAIPQ9Y6H5 919 aa13.29□□□□□ -0.28
SNCA-207ENST00000502987 IRF6O14896 467 aa13.28□□□□□ -0.28
SNCA-207ENST00000502987 SEMA3EO15041 775 aa13.28□□□□□ -0.28
SNCA-207ENST00000502987 INPP5BP32019 993 aa13.28□□□□□ -0.28
SNCA-207ENST00000502987 ZSCAN29Q8IWY8 852 aaPredicted RBP13.28□□□□□ -0.28
SNCA-207ENST00000502987 SLF2Q8IX21 1173 aa13.28□□□□□ -0.28
SNCA-207ENST00000502987 ARHGAP45Q92619 1136 aa13.28□□□□□ -0.28
SNCA-207ENST00000502987 CENPFP49454 3210 aa13.28□□□□□ -0.28
SNCA-207ENST00000502987 ECM2O94769 699 aaPredicted RBP13.27□□□□□ -0.29
SNCA-207ENST00000502987 TFCP2Q12800 502 aa13.27□□□□□ -0.29
SNCA-207ENST00000502987 NFIAQ12857 509 aa13.27□□□□□ -0.29
SNCA-207ENST00000502987 PPIL2Q13356 520 aa13.27□□□□□ -0.29
SNCA-207ENST00000502987 SPTY2D1Q68D10 685 aaPredicted RBP13.27□□□□□ -0.29
SNCA-207ENST00000502987 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.27□□□□□ -0.29
SNCA-207ENST00000502987 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.29
SNCA-207ENST00000502987 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
SNCA-207ENST00000502987 BTBD19C9JJ37 291 aa13.26□□□□□ -0.29
SNCA-207ENST00000502987 GNAI2P04899 355 aa13.26□□□□□ -0.29
SNCA-207ENST00000502987 IRX5P78411 483 aaPredicted RBP13.26□□□□□ -0.29
SNCA-207ENST00000502987 PPATQ06203 517 aa13.26□□□□□ -0.29
SNCA-207ENST00000502987 G3BP1Q13283 466 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNCA-207ENST00000502987 MVPQ14764 893 aaKnown RBP13.26□□□□□ -0.29
SNCA-207ENST00000502987 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
SNCA-207ENST00000502987 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
SNCA-207ENST00000502987 SALL1Q9NSC2 1324 aa13.26□□□□□ -0.29
SNCA-207ENST00000502987 FAM198AQ9UFP1 575 aa13.26□□□□□ -0.29
SNCA-207ENST00000502987 HTTP42858 3142 aa13.25□□□□□ -0.29
SNCA-207ENST00000502987 RPAP1Q9BWH6 1393 aaPredicted RBP13.25□□□□□ -0.29
SNCA-207ENST00000502987 TLR2O60603 784 aa13.25□□□□□ -0.29
SNCA-207ENST00000502987 BCAR3O75815 825 aa13.25□□□□□ -0.29
SNCA-207ENST00000502987 RGS3P49796 1198 aa13.25□□□□□ -0.29
SNCA-207ENST00000502987 SLC9C1Q4G0N8 1177 aa13.25□□□□□ -0.29
SNCA-207ENST00000502987 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
SNCA-207ENST00000502987 ZFPM1Q8IX07 1006 aa13.25□□□□□ -0.29
SNCA-207ENST00000502987 SLAIN1Q8ND83 568 aa13.25□□□□□ -0.29
SNCA-207ENST00000502987 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
SNCA-207ENST00000502987 PICALMQ13492 652 aa13.24□□□□□ -0.29
SNCA-207ENST00000502987 RASGRF1Q13972 1273 aa13.24□□□□□ -0.29
SNCA-207ENST00000502987 PRPF38BQ5VTL8 546 aaKnown RBP13.24□□□□□ -0.29
SNCA-207ENST00000502987 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
SNCA-207ENST00000502987 ZCCHC17Q9NP64 241 aaKnown RBP13.24□□□□□ -0.29
SNCA-207ENST00000502987 PICK1Q9NRD5 415 aa13.24□□□□□ -0.29
SNCA-207ENST00000502987 TNNQ9UQP3 1299 aa13.24□□□□□ -0.29
SNCA-207ENST00000502987 PDHXO00330 501 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 ENTPD3O75355 529 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 TRIM27P14373 513 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 BTDP43251 543 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 CAP1Q01518 475 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 OS9Q13438 667 aaPredicted RBP13.23□□□□□ -0.29
SNCA-207ENST00000502987 SLC4A8Q2Y0W8 1093 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 CPA4Q9UI42 421 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 ZNF112Q9UJU3 913 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 PTCH2Q9Y6C5 1203 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 DOCK2Q92608 1830 aa13.23□□□□□ -0.29
SNCA-207ENST00000502987 SLC34A2O95436 690 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
SNCA-207ENST00000502987 LDHCP07864 332 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 EN2P19622 333 aaPredicted RBP13.22□□□□□ -0.29
SNCA-207ENST00000502987 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
SNCA-207ENST00000502987 GSTO1P78417 241 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 MECOMQ03112 1051 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 MTX1Q13505 466 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 ZKSCAN2Q63HK3 967 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 ANKRD23Q86SG2 305 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 ARMC5Q96C12 935 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 ARHGAP39Q9C0H5 1083 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
SNCA-207ENST00000502987 KIAA0100Q14667 2235 aaKnown RBP13.21□□□□□ -0.29
SNCA-207ENST00000502987 MROH7-TTC4A0A0A0MT08 1334 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 GAKO14976 1311 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 ZSWIM8A7E2V4 1837 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 LACTBP83111 547 aaPredicted RBP13.21□□□□□ -0.29
SNCA-207ENST00000502987 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNCA-207ENST00000502987 NOL9Q5SY16 702 aaKnown RBP13.21□□□□□ -0.29
SNCA-207ENST00000502987 GADL1Q6ZQY3 521 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 TBC1D9Q6ZT07 1266 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 SPATA5Q8NB90 893 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 NOL10Q9BSC4 688 aaKnown RBP13.21□□□□□ -0.29
SNCA-207ENST00000502987 IDI2Q9BXS1 227 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 HMG20BQ9P0W2 317 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 LRP2BPQ9P2M1 347 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 ZHX2Q9Y6X8 837 aa13.21□□□□□ -0.29
SNCA-207ENST00000502987 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
SNCA-207ENST00000502987 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
SNCA-207ENST00000502987 DDTLA6NHG4 134 aaPredicted RBP13.2□□□□□ -0.3
SNCA-207ENST00000502987 HOXD10P28358 340 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms