RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 ZFPM1Q8IX07 1006 aa17.11■□□□□ 0.33
DDR1-247ENST00000502955 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
DDR1-247ENST00000502955 DPF3Q92784 378 aa17.11■□□□□ 0.33
DDR1-247ENST00000502955 HTATIP2Q9BUP3 242 aa17.11■□□□□ 0.33
DDR1-247ENST00000502955 RNF208Q9H0X6 261 aa17.11■□□□□ 0.33
DDR1-247ENST00000502955 CEP126Q9P2H0 1117 aa17.11■□□□□ 0.33
DDR1-247ENST00000502955 AFG3L2Q9Y4W6 797 aa17.11■□□□□ 0.33
DDR1-247ENST00000502955 GAKO14976 1311 aa17.11■□□□□ 0.33
DDR1-247ENST00000502955 LAMA3Q16787 3333 aa17.11■□□□□ 0.33
DDR1-247ENST00000502955 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
DDR1-247ENST00000502955 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
DDR1-247ENST00000502955 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
DDR1-247ENST00000502955 PRO3102Q9H379 93 aa17.1■□□□□ 0.33
DDR1-247ENST00000502955 ZHX2Q9Y6X8 837 aa17.1■□□□□ 0.33
DDR1-247ENST00000502955 PDS5AQ29RF7 1337 aaKnown RBP17.1■□□□□ 0.33
DDR1-247ENST00000502955 PHIPQ8WWQ0 1821 aa17.1■□□□□ 0.33
DDR1-247ENST00000502955 PHKA1P46020 1223 aa17.09■□□□□ 0.33
DDR1-247ENST00000502955 RGS3P49796 1198 aa17.09■□□□□ 0.33
DDR1-247ENST00000502955 SIL1Q9H173 461 aa17.09■□□□□ 0.33
DDR1-247ENST00000502955 PICK1Q9NRD5 415 aa17.09■□□□□ 0.33
DDR1-247ENST00000502955 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
DDR1-247ENST00000502955 DOCK1Q14185 1865 aa17.09■□□□□ 0.33
DDR1-247ENST00000502955 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
DDR1-247ENST00000502955 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.32
DDR1-247ENST00000502955 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
DDR1-247ENST00000502955 IRF5Q13568 498 aa17.08■□□□□ 0.32
DDR1-247ENST00000502955 SH3BP5LQ7L8J4 393 aa17.08■□□□□ 0.32
DDR1-247ENST00000502955 PXYLP1Q8TE99 480 aa17.08■□□□□ 0.32
DDR1-247ENST00000502955 U2AF1L4Q8WU68 220 aaKnown RBP17.08■□□□□ 0.32
DDR1-247ENST00000502955 BIN2Q9UBW5 565 aaPredicted RBP17.08■□□□□ 0.32
DDR1-247ENST00000502955 GABRQQ9UN88 632 aa17.08■□□□□ 0.32
DDR1-247ENST00000502955 SGPL1O95470 568 aa17.07■□□□□ 0.32
DDR1-247ENST00000502955 CCDC102BQ68D86 513 aa17.07■□□□□ 0.32
DDR1-247ENST00000502955 SLF2Q8IX21 1173 aa17.07■□□□□ 0.32
DDR1-247ENST00000502955 COPRSQ9NQ92 184 aa17.07■□□□□ 0.32
DDR1-247ENST00000502955 HDAC5Q9UQL6 1122 aa17.07■□□□□ 0.32
DDR1-247ENST00000502955 ADCY3O60266 1144 aa17.06■□□□□ 0.32
DDR1-247ENST00000502955 UNC93B1Q9H1C4 597 aa17.06■□□□□ 0.32
DDR1-247ENST00000502955 NR2E3Q9Y5X4 410 aa17.06■□□□□ 0.32
DDR1-247ENST00000502955 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
DDR1-247ENST00000502955 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
DDR1-247ENST00000502955 DDTLA6NHG4 134 aaPredicted RBP17.05■□□□□ 0.32
DDR1-247ENST00000502955 TBC1D12O60347 775 aa17.05■□□□□ 0.32
DDR1-247ENST00000502955 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
DDR1-247ENST00000502955 FARP2O94887 1054 aaPredicted RBP17.05■□□□□ 0.32
DDR1-247ENST00000502955 FLT3LGP49771 235 aa17.05■□□□□ 0.32
DDR1-247ENST00000502955 RASGRF1Q13972 1273 aa17.05■□□□□ 0.32
DDR1-247ENST00000502955 GADL1Q6ZQY3 521 aa17.05■□□□□ 0.32
DDR1-247ENST00000502955 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
DDR1-247ENST00000502955 DDX4Q9NQI0 724 aaKnown RBP17.05■□□□□ 0.32
DDR1-247ENST00000502955 SMC4Q9NTJ3 1288 aa17.05■□□□□ 0.32
DDR1-247ENST00000502955 AGTPBP1Q9UPW5 1226 aa17.05■□□□□ 0.32
DDR1-247ENST00000502955 A0A1W2PPC1 479 aa17.04■□□□□ 0.32
DDR1-247ENST00000502955 TNPO2O14787 897 aaKnown RBP17.04■□□□□ 0.32
DDR1-247ENST00000502955 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
DDR1-247ENST00000502955 CT47B1P0C2W7 299 aaPredicted RBP17.04■□□□□ 0.32
DDR1-247ENST00000502955 ADORA1P30542 326 aa17.04■□□□□ 0.32
DDR1-247ENST00000502955 BTDP43251 543 aa17.04■□□□□ 0.32
DDR1-247ENST00000502955 SPTY2D1Q68D10 685 aaPredicted RBP17.04■□□□□ 0.32
DDR1-247ENST00000502955 ZSCAN29Q8IWY8 852 aaPredicted RBP17.04■□□□□ 0.32
DDR1-247ENST00000502955 SMCR8Q8TEV9 937 aaPredicted RBP17.04■□□□□ 0.32
DDR1-247ENST00000502955 PAK6Q9NQU5 681 aaPredicted RBP17.04■□□□□ 0.32
DDR1-247ENST00000502955 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
DDR1-247ENST00000502955 MROH7-TTC4A0A0A0MT08 1334 aa17.03■□□□□ 0.32
DDR1-247ENST00000502955 GPR75-ASB3A0A0A6YYF3 556 aa17.03■□□□□ 0.32
DDR1-247ENST00000502955 INHAP05111 366 aa17.03■□□□□ 0.32
DDR1-247ENST00000502955 FAM110CQ1W6H9 321 aa17.03■□□□□ 0.32
DDR1-247ENST00000502955 TRMT2AQ8IZ69 625 aaKnown RBP17.03■□□□□ 0.32
DDR1-247ENST00000502955 PROCA1Q8NCQ7 364 aaPredicted RBP17.03■□□□□ 0.32
DDR1-247ENST00000502955 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
DDR1-247ENST00000502955 COL2A1P02458 1487 aaPredicted RBP17.03■□□□□ 0.32
DDR1-247ENST00000502955 DOCK3Q8IZD9 2030 aa17.03■□□□□ 0.32
DDR1-247ENST00000502955 LOC285556D6RIA3 1793 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 COL6A3P12111 3177 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 TRIM75PA6NK02 468 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 MAP4K4O95819 1239 aaPredicted RBP17.02■□□□□ 0.32
DDR1-247ENST00000502955 ELNP15502 786 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 RHBDL3P58872 404 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 TIMM10P62072 90 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 PICALMQ13492 652 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 TBC1D2Q9BYX2 928 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 CRISPLD2Q9H0B8 497 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 PNMA3Q9UL41 463 aa17.02■□□□□ 0.32
DDR1-247ENST00000502955 SLURP2P0DP57 97 aa17.01■□□□□ 0.31
DDR1-247ENST00000502955 MECOMQ03112 1051 aa17.01■□□□□ 0.31
DDR1-247ENST00000502955 MVPQ14764 893 aaKnown RBP17.01■□□□□ 0.31
DDR1-247ENST00000502955 ZNF384Q8TF68 577 aa17.01■□□□□ 0.31
DDR1-247ENST00000502955 COA7Q96BR5 231 aa17.01■□□□□ 0.31
DDR1-247ENST00000502955 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
DDR1-247ENST00000502955 OSBPL5Q9H0X9 879 aaPredicted RBP17.01■□□□□ 0.31
DDR1-247ENST00000502955 NOB1Q9ULX3 412 aaKnown RBP17.01■□□□□ 0.31
DDR1-247ENST00000502955 AKAP2Q9Y2D5 859 aa17.01■□□□□ 0.31
DDR1-247ENST00000502955 A0A1B0GUL7 405 aa17■□□□□ 0.31
DDR1-247ENST00000502955 EVI5O60447 810 aa17■□□□□ 0.31
DDR1-247ENST00000502955 TFRCP02786 760 aaKnown RBP17■□□□□ 0.31
DDR1-247ENST00000502955 MTX1Q13505 466 aa17■□□□□ 0.31
DDR1-247ENST00000502955 TREML2Q5T2D2 321 aa17■□□□□ 0.31
DDR1-247ENST00000502955 ERICH6Q7L0X2 663 aa17■□□□□ 0.31
DDR1-247ENST00000502955 ANKRD13CQ8N6S4 541 aa17■□□□□ 0.31
DDR1-247ENST00000502955 XAGE2Q96GT9 111 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms