RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
NEDD4-203ENST00000502612 PPP1R9AQ9ULJ8 1098 aa9.83□□□□□ -0.84
NEDD4-203ENST00000502612 SPDYE3A6NKU9 549 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 GFRA2O00451 464 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 ALX3O95076 343 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 ATP2B1P20020 1258 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 CLCQ05315 142 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 PRRT3Q5FWE3 981 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 EXOSC6Q5RKV6 272 aaKnown RBP9.82□□□□□ -0.84
NEDD4-203ENST00000502612 GK5Q6ZS86 529 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 C12orf40Q86WS4 652 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 SEC16BQ96JE7 1060 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 RAD18Q9NS91 495 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 CORINQ9Y5Q5 1042 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 ROBO2Q9HCK4 1378 aa9.82□□□□□ -0.84
NEDD4-203ENST00000502612 GTF2F1P35269 517 aaKnown RBP eCLIP9.81□□□□□ -0.84
NEDD4-203ENST00000502612 IGF2-ASQ6U949 168 aa9.81□□□□□ -0.84
NEDD4-203ENST00000502612 BEND7Q8N7W2 519 aaPredicted RBP9.81□□□□□ -0.84
NEDD4-203ENST00000502612 NOP53Q9NZM5 478 aaKnown RBP9.81□□□□□ -0.84
NEDD4-203ENST00000502612 MRVI1Q9Y6F6 885 aa9.81□□□□□ -0.84
NEDD4-203ENST00000502612 PRAMEF27A3QJZ7 478 aa9.8□□□□□ -0.84
NEDD4-203ENST00000502612 PIK3R2O00459 728 aa9.8□□□□□ -0.84
NEDD4-203ENST00000502612 TMPRSS2O15393 492 aa9.8□□□□□ -0.84
NEDD4-203ENST00000502612 DRD2P14416 443 aa9.8□□□□□ -0.84
NEDD4-203ENST00000502612 ZC3H12AQ5D1E8 599 aaKnown RBP9.8□□□□□ -0.84
NEDD4-203ENST00000502612 DCAF11Q8TEB1 546 aa9.8□□□□□ -0.84
NEDD4-203ENST00000502612 ELMO3Q96BJ8 720 aa9.8□□□□□ -0.84
NEDD4-203ENST00000502612 SPATA32Q96LK8 384 aa9.8□□□□□ -0.84
NEDD4-203ENST00000502612 DNAJC2Q99543 621 aaKnown RBP9.8□□□□□ -0.84
NEDD4-203ENST00000502612 MRPL18Q9H0U6 180 aaKnown RBP9.8□□□□□ -0.84
NEDD4-203ENST00000502612 PCDHB14Q9Y5E9 798 aa9.8□□□□□ -0.84
NEDD4-203ENST00000502612 F8W735 103 aaPredicted RBP9.79□□□□□ -0.84
NEDD4-203ENST00000502612 INSM1Q01101 510 aaPredicted RBP9.79□□□□□ -0.84
NEDD4-203ENST00000502612 PPM1JQ5JR12 505 aa9.79□□□□□ -0.84
NEDD4-203ENST00000502612 RNF208Q9H0X6 261 aa9.79□□□□□ -0.84
NEDD4-203ENST00000502612 AP4E1Q9UPM8 1137 aa9.79□□□□□ -0.84
NEDD4-203ENST00000502612 HIF3AQ9Y2N7 669 aa9.79□□□□□ -0.84
NEDD4-203ENST00000502612 SSBP05455 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
NEDD4-203ENST00000502612 ADH5P11766 374 aa9.78□□□□□ -0.84
NEDD4-203ENST00000502612 HP1BP3Q5SSJ5 553 aaPredicted RBP9.78□□□□□ -0.84
NEDD4-203ENST00000502612 NUTM2GQ5VZR2 741 aa9.78□□□□□ -0.84
NEDD4-203ENST00000502612 CYFIP1Q7L576 1253 aa9.78□□□□□ -0.84
NEDD4-203ENST00000502612 HDXQ7Z353 690 aa9.78□□□□□ -0.84
NEDD4-203ENST00000502612 UBXN4Q92575 508 aa9.78□□□□□ -0.84
NEDD4-203ENST00000502612 MEGF11A6BM72 1044 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 SPATA31C1P0DKV0 1188 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 ETFBP38117 255 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 ID3Q02535 119 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 COL9A2Q14055 689 aaPredicted RBP9.77□□□□□ -0.85
NEDD4-203ENST00000502612 FBXW10Q5XX13 1052 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 FERD3LQ96RJ6 166 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 SRRTQ9BXP5 876 aaKnown RBP9.77□□□□□ -0.85
NEDD4-203ENST00000502612 ANTXR1Q9H6X2 564 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 ZNF408Q9H9D4 720 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 CRIM1Q9NZV1 1036 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 SNCAIPQ9Y6H5 919 aa9.77□□□□□ -0.85
NEDD4-203ENST00000502612 SLFN14P0C7P3 912 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 ZNF165P49910 485 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 RING1Q06587 406 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 UBE3DQ7Z6J8 389 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 SMG8Q8ND04 991 aaKnown RBP9.76□□□□□ -0.85
NEDD4-203ENST00000502612 CPLX3Q8WVH0 158 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 ANAPC16Q96DE5 110 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 SHDQ96IW2 340 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 FANCD2OSQ96PS1 177 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 DISC1Q9NRI5 854 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 USP21Q9UK80 565 aa9.76□□□□□ -0.85
NEDD4-203ENST00000502612 DNAJA2O60884 412 aa9.75□□□□□ -0.85
NEDD4-203ENST00000502612 HTR3BO95264 441 aa9.75□□□□□ -0.85
NEDD4-203ENST00000502612 TIAF1O95411 115 aa9.75□□□□□ -0.85
NEDD4-203ENST00000502612 GRK4P32298 578 aa9.75□□□□□ -0.85
NEDD4-203ENST00000502612 NTF4P34130 210 aa9.75□□□□□ -0.85
NEDD4-203ENST00000502612 SOX4Q06945 474 aaPredicted RBP9.75□□□□□ -0.85
NEDD4-203ENST00000502612 DIEXFQ68CQ4 756 aaKnown RBP9.75□□□□□ -0.85
NEDD4-203ENST00000502612 REXO1Q8N1G1 1221 aaKnown RBP9.75□□□□□ -0.85
NEDD4-203ENST00000502612 SCARF2Q96GP6 870 aaPredicted RBP9.75□□□□□ -0.85
NEDD4-203ENST00000502612 SUGCTQ9HAC7 445 aa9.75□□□□□ -0.85
NEDD4-203ENST00000502612 CYP4F12Q9HCS2 524 aa9.75□□□□□ -0.85
NEDD4-203ENST00000502612 ZNRF3Q9ULT6 936 aa9.75□□□□□ -0.85
NEDD4-203ENST00000502612 NEFMP07197 916 aa9.74□□□□□ -0.85
NEDD4-203ENST00000502612 PREPP48147 710 aa9.74□□□□□ -0.85
NEDD4-203ENST00000502612 ERVK-24P63145 666 aa9.74□□□□□ -0.85
NEDD4-203ENST00000502612 FDX2Q6P4F2 183 aa9.74□□□□□ -0.85
NEDD4-203ENST00000502612 FAM169BQ8N8A8 192 aa9.74□□□□□ -0.85
NEDD4-203ENST00000502612 C12orf50Q8NA57 414 aaPredicted RBP9.74□□□□□ -0.85
NEDD4-203ENST00000502612 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
NEDD4-203ENST00000502612 AKTIPQ9H8T0 292 aa9.74□□□□□ -0.85
NEDD4-203ENST00000502612 EHMT1Q9H9B1 1298 aa9.74□□□□□ -0.85
NEDD4-203ENST00000502612 REV1Q9UBZ9 1251 aa9.74□□□□□ -0.85
NEDD4-203ENST00000502612 ACTL7BQ9Y614 415 aa9.74□□□□□ -0.85
NEDD4-203ENST00000502612 STK10O94804 968 aaKnown RBP9.73□□□□□ -0.85
NEDD4-203ENST00000502612 NOS3P29474 1203 aa9.73□□□□□ -0.85
NEDD4-203ENST00000502612 HNRNPUQ00839 825 aaKnown RBP eCLIP9.73□□□□□ -0.85
NEDD4-203ENST00000502612 TTLL4Q14679 1199 aa9.73□□□□□ -0.85
NEDD4-203ENST00000502612 ZBTB37Q5TC79 503 aa9.73□□□□□ -0.85
NEDD4-203ENST00000502612 DYMQ7RTS9 669 aa9.73□□□□□ -0.85
NEDD4-203ENST00000502612 TMEM130Q8N3G9 435 aa9.73□□□□□ -0.85
NEDD4-203ENST00000502612 C2CD4AQ8NCU7 369 aaPredicted RBP9.73□□□□□ -0.85
NEDD4-203ENST00000502612 PMFBP1Q8TBY8 1022 aa9.73□□□□□ -0.85
NEDD4-203ENST00000502612 PICK1Q9NRD5 415 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms