RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 NFIAQ12857 509 aa12.98□□□□□ -0.33
UBE2D3-212ENST00000502563 DCAF15Q66K64 600 aa12.98□□□□□ -0.33
UBE2D3-212ENST00000502563 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-212ENST00000502563 ADGRA1Q86SQ6 560 aa12.98□□□□□ -0.33
UBE2D3-212ENST00000502563 METTL16Q86W50 562 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-212ENST00000502563 CCDC102AQ96A19 550 aa12.98□□□□□ -0.33
UBE2D3-212ENST00000502563 LNPKQ9C0E8 428 aa12.98□□□□□ -0.33
UBE2D3-212ENST00000502563 TMEM39BQ9GZU3 492 aa12.98□□□□□ -0.33
UBE2D3-212ENST00000502563 LAMB1P07942 1786 aa12.98□□□□□ -0.33
UBE2D3-212ENST00000502563 NEFLP07196 543 aa12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 MAP2K2P36507 400 aa12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 IREB2P48200 963 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 HUNKP57058 714 aa12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 IRX6P78412 446 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 PLEKHM2Q8IWE5 1019 aa12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 OSBPL5Q9H0X9 879 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 AATFQ9NY61 560 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 ABT1Q9ULW3 272 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 NDUFB9Q9Y6M9 179 aa12.97□□□□□ -0.33
UBE2D3-212ENST00000502563 ZNF532Q9HCE3 1301 aa12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 RGS3P49796 1198 aa12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 RGMBQ6NW40 437 aa12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 ANKRD13AQ8IZ07 590 aa12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 ZNF408Q9H9D4 720 aa12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 DDX4Q9NQI0 724 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 MKRN1Q9UHC7 482 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 ZNF112Q9UJU3 913 aa12.96□□□□□ -0.33
UBE2D3-212ENST00000502563 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.34
UBE2D3-212ENST00000502563 CDK5RAP2Q96SN8 1893 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 FLT1P17948 1338 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 USP2O75604 605 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 SLC10A3P09131 477 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 CACNB3P54284 484 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 NOGQ13253 232 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 GIMAP6Q6P9H5 292 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 DLK2Q6UY11 383 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 APPBP2Q92624 585 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 EDC3Q96F86 508 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 EHD4Q9H223 541 aa12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 HERC5Q9UII4 1024 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-212ENST00000502563 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 RNF113AO15541 343 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 ZBTB48P10074 688 aaPredicted RBP12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 NOL9Q5SY16 702 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 B4GALNT3Q6L9W6 998 aa12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 SH3RF3Q8TEJ3 882 aaPredicted RBP12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 CSRNP1Q96S65 589 aa12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 ZNF341Q9BYN7 854 aa12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 ATP8A2Q9NTI2 1148 aa12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 GINM1Q9NU53 330 aa12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 PI4KBQ9UBF8 816 aa12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 SCAF8Q9UPN6 1271 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-212ENST00000502563 FAM155AB1AL88 458 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-212ENST00000502563 GNAT2P19087 354 aa12.93□□□□□ -0.34
UBE2D3-212ENST00000502563 VEGFBP49765 207 aa12.93□□□□□ -0.34
UBE2D3-212ENST00000502563 TSHZ3Q63HK5 1081 aa12.93□□□□□ -0.34
UBE2D3-212ENST00000502563 SH3BP5LQ7L8J4 393 aa12.93□□□□□ -0.34
UBE2D3-212ENST00000502563 FOXP4Q8IVH2 680 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-212ENST00000502563 CAPNS2Q96L46 248 aa12.93□□□□□ -0.34
UBE2D3-212ENST00000502563 ANGEL1Q9UNK9 670 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-212ENST00000502563 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 HTRA3P83110 453 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 TCP10Q12799 353 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 ZMYM1Q5SVZ6 1142 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 RASAL3Q86YV0 1011 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 CDAN1Q8IWY9 1227 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 MIGA1Q8NAN2 632 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 TGFBRAP1Q8WUH2 860 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 AIDAQ96BJ3 306 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 OTOFQ9HC10 1997 aa12.92□□□□□ -0.34
UBE2D3-212ENST00000502563 PHF20L1A8MW92 1017 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 HIP1O00291 1037 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 CTNND1O60716 968 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 HLA-DOAP06340 250 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 PDE4AP27815 886 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 ZNF157P51786 506 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 INHBEP58166 350 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 DYNLL1P63167 89 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 MAP2K1Q02750 393 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 PICALMQ13492 652 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 TTLL12Q14166 644 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 TTC6Q86TZ1 520 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 ZFPM1Q8IX07 1006 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 OSBP2Q969R2 916 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 STRBPQ96SI9 672 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 FSD1Q9BTV5 496 aa12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 PUS7LQ9H0K6 701 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 DCP1AQ9NPI6 582 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-212ENST00000502563 HELLSQ9NRZ9 838 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms