RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 CPLX3Q8WVH0 158 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 SLC30A3Q99726 388 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 ARPC5LQ9BPX5 153 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 CCDC113Q9H0I3 377 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 AAASQ9NRG9 546 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 STRN4Q9NRL3 753 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMEM260Q9NX78 707 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 NSFL1CQ9UNZ2 370 aaKnown RBP5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 ATP8A1Q9Y2Q0 1164 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 TNIKQ9UKE5 1360 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 KDM5BQ9UGL1 1544 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 LOC102724428A0A0B4J2F2 783 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 CAND2O75155 1236 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 ALDH1L1O75891 902 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 BPNT1O95861 308 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 CNGA1P29973 690 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 EIF4A3P38919 411 aaKnown RBP5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 SIK1P57059 783 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 CABP4P57796 275 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 HNRNPUQ00839 825 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 FAM182BQ5T319 152 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 PPP4R4Q6NUP7 873 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 KRBA2Q6ZNG9 492 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 KRT26Q7Z3Y9 468 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 C14orf80Q86SX3 495 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 C3orf58Q8NDZ4 430 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 GLIS3Q8NEA6 775 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 SCYL1Q96KG9 808 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMEM74Q96NL1 305 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 FEZ1Q99689 392 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 RSRP1Q9BUV0 290 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 DZANK1Q9NVP4 752 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 PRKAG3Q9UGI9 489 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 SUPT16HQ9Y5B9 1047 aaKnown RBP5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 KIAA0556O60303 1618 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 SAMD9Q5K651 1589 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 ABCC2Q92887 1545 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 ABCC10Q5T3U5 1492 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 A0A096LPE4 126 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 A0A1W2PPZ6 126 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 SMAD7O15105 426 aaKnown RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 PLIN1O60240 522 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 KRT18P05783 430 aaKnown RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 HOXD8P13378 290 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 PTPRAP18433 802 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 IFRD2Q12894 506 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 DALRD3Q5D0E6 543 aaKnown RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 CEP135Q66GS9 1140 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 ELMSAN1Q6PJG2 1045 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 HFE2Q6ZVN8 426 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 SV2AQ7L0J3 742 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 SYT9Q86SS6 491 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 DDX42Q86XP3 938 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMEM102Q8N9M5 508 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 TRIM47Q96LD4 638 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 TCF12Q99081 682 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 BHLHE41Q9C0J9 482 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 ARNT2Q9HBZ2 717 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 MSRB2Q9Y3D2 182 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 PTPRGP23470 1445 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 KIF21BO75037 1637 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 POTECB2RU33 542 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 J3QW42 95 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 GPR25O00155 361 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 CPB1P15086 417 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 ACPPP15309 386 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 PTMSP20962 102 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 BDNFP23560 247 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 SOX9P48436 509 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 LIG3P49916 1009 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 LMOD3Q0VAK6 560 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 HDAC1Q13547 482 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 GRIN2CQ14957 1233 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 PPP2R5AQ15172 486 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 TTF1Q15361 905 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 RPS26P11Q5JNZ5 115 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 AXDND1Q5T1B0 1012 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 COL13A1Q5TAT6 717 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 ZNF468Q5VIY5 522 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 WDR78Q5VTH9 848 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 TTBK2Q6IQ55 1244 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 CEP120Q8N960 986 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 ANKRD24Q8TF21 1146 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 RELTQ969Z4 430 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 MTA3Q9BTC8 594 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 PBX4Q9BYU1 374 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMX4Q9H1E5 349 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 RASSF4Q9H2L5 321 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMEM39AQ9NV64 488 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 NDFIP2Q9NV92 336 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 DNAJB12Q9NXW2 375 aaKnown RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 FBXO9Q9UK97 447 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 STRIP2Q9ULQ0 834 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 ABCA8O94911 1581 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 WASHC2CQ9Y4E1 1318 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 CARMIL2Q6F5E8 1435 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 UACAQ9BZF9 1416 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 METTL12A8MUP2 240 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 C11orf95C9JLR9 678 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms