RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 CPLX3Q8WVH0 158 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 SLC30A3Q99726 388 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 ARPC5LQ9BPX5 153 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 CCDC113Q9H0I3 377 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 AAASQ9NRG9 546 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 STRN4Q9NRL3 753 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMEM260Q9NX78 707 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 NSFL1CQ9UNZ2 370 aaKnown RBP5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 ATP8A1Q9Y2Q0 1164 aa5.56□□□□□ -1.52
HMGB1P21-201ENST00000502313 TNIKQ9UKE5 1360 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 KDM5BQ9UGL1 1544 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 LOC102724428A0A0B4J2F2 783 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 CAND2O75155 1236 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 ALDH1L1O75891 902 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 BPNT1O95861 308 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 CNGA1P29973 690 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 EIF4A3P38919 411 aaKnown RBP5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 SIK1P57059 783 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 CABP4P57796 275 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 HNRNPUQ00839 825 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 FAM182BQ5T319 152 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 PPP4R4Q6NUP7 873 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 KRBA2Q6ZNG9 492 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 KRT26Q7Z3Y9 468 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 C14orf80Q86SX3 495 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 C3orf58Q8NDZ4 430 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 GLIS3Q8NEA6 775 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 SCYL1Q96KG9 808 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMEM74Q96NL1 305 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 FEZ1Q99689 392 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 RSRP1Q9BUV0 290 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 DZANK1Q9NVP4 752 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 PRKAG3Q9UGI9 489 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 SUPT16HQ9Y5B9 1047 aaKnown RBP5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 KIAA0556O60303 1618 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 SAMD9Q5K651 1589 aa5.55□□□□□ -1.52
HMGB1P21-201ENST00000502313 ABCC2Q92887 1545 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 ABCC10Q5T3U5 1492 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 A0A096LPE4 126 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 A0A1W2PPZ6 126 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 SMAD7O15105 426 aaKnown RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 PLIN1O60240 522 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 KRT18P05783 430 aaKnown RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 HOXD8P13378 290 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 PTPRAP18433 802 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 IFRD2Q12894 506 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 DALRD3Q5D0E6 543 aaKnown RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 CEP135Q66GS9 1140 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 ELMSAN1Q6PJG2 1045 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 HFE2Q6ZVN8 426 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 SV2AQ7L0J3 742 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 SYT9Q86SS6 491 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 DDX42Q86XP3 938 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMEM102Q8N9M5 508 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 TRIM47Q96LD4 638 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 TCF12Q99081 682 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 BHLHE41Q9C0J9 482 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 ARNT2Q9HBZ2 717 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 MSRB2Q9Y3D2 182 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 PTPRGP23470 1445 aa5.54□□□□□ -1.52
HMGB1P21-201ENST00000502313 KIF21BO75037 1637 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 POTECB2RU33 542 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 J3QW42 95 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 GPR25O00155 361 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 CPB1P15086 417 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 ACPPP15309 386 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 PTMSP20962 102 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 BDNFP23560 247 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 SOX9P48436 509 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 LIG3P49916 1009 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 LMOD3Q0VAK6 560 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 HDAC1Q13547 482 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 GRIN2CQ14957 1233 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 PPP2R5AQ15172 486 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 TTF1Q15361 905 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 RPS26P11Q5JNZ5 115 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 AXDND1Q5T1B0 1012 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 COL13A1Q5TAT6 717 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 ZNF468Q5VIY5 522 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 WDR78Q5VTH9 848 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 TTBK2Q6IQ55 1244 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 CEP120Q8N960 986 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 ANKRD24Q8TF21 1146 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 RELTQ969Z4 430 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 MTA3Q9BTC8 594 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 PBX4Q9BYU1 374 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMX4Q9H1E5 349 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 RASSF4Q9H2L5 321 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 TMEM39AQ9NV64 488 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 NDFIP2Q9NV92 336 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 DNAJB12Q9NXW2 375 aaKnown RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 FBXO9Q9UK97 447 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 STRIP2Q9ULQ0 834 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 ABCA8O94911 1581 aa5.53□□□□□ -1.52
HMGB1P21-201ENST00000502313 WASHC2CQ9Y4E1 1318 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 CARMIL2Q6F5E8 1435 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 UACAQ9BZF9 1416 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 METTL12A8MUP2 240 aa5.52□□□□□ -1.53
HMGB1P21-201ENST00000502313 C11orf95C9JLR9 678 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms