RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 APPP05067 770 aa23.36■■□□□ 1.33
LINC01550-201ENST00000499006 TMOD2Q9NZR1 351 aa23.36■■□□□ 1.33
LINC01550-201ENST00000499006 MAPKAPK5Q8IW41 473 aa23.35■■□□□ 1.33
LINC01550-201ENST00000499006 NACAP1Q9BZK3 213 aa23.35■■□□□ 1.33
LINC01550-201ENST00000499006 RRAGCQ9HB90 399 aa23.35■■□□□ 1.33
LINC01550-201ENST00000499006 CNTNAP1P78357 1384 aa23.34■■□□□ 1.33
LINC01550-201ENST00000499006 VEGFAP15692 232 aaPredicted RBP23.34■■□□□ 1.33
LINC01550-201ENST00000499006 OSBPL5Q9H0X9 879 aaPredicted RBP23.34■■□□□ 1.33
LINC01550-201ENST00000499006 RBM8AQ9Y5S9 174 aaKnown RBP23.34■■□□□ 1.33
LINC01550-201ENST00000499006 U3KPZ7 1027 aaPredicted RBP23.34■■□□□ 1.33
LINC01550-201ENST00000499006 MYH8P13535 1937 aa23.34■■□□□ 1.33
LINC01550-201ENST00000499006 COL2A1P02458 1487 aaPredicted RBP23.34■■□□□ 1.33
LINC01550-201ENST00000499006 PITPNM2Q9BZ72 1349 aa23.33■■□□□ 1.33
LINC01550-201ENST00000499006 ENTPD3O75355 529 aa23.33■■□□□ 1.33
LINC01550-201ENST00000499006 PICALMQ13492 652 aa23.33■■□□□ 1.33
LINC01550-201ENST00000499006 NECTIN1Q15223 517 aa23.33■■□□□ 1.33
LINC01550-201ENST00000499006 FAM83AQ86UY5 434 aa23.33■■□□□ 1.33
LINC01550-201ENST00000499006 PNMA8AQ86V59 439 aaPredicted RBP23.33■■□□□ 1.33
LINC01550-201ENST00000499006 NAPBQ9H115 298 aa23.33■■□□□ 1.33
LINC01550-201ENST00000499006 VEZTQ9HBM0 779 aa23.33■■□□□ 1.33
LINC01550-201ENST00000499006 PGAP2Q9UHJ9 254 aa23.33■■□□□ 1.33
LINC01550-201ENST00000499006 TCP10L2B9ZVM9 353 aa23.32■■□□□ 1.32
LINC01550-201ENST00000499006 TDO2P48775 406 aa23.32■■□□□ 1.32
LINC01550-201ENST00000499006 ANGEL2Q5VTE6 544 aaKnown RBP23.32■■□□□ 1.32
LINC01550-201ENST00000499006 CTR9Q6PD62 1173 aa23.32■■□□□ 1.32
LINC01550-201ENST00000499006 ZFPM1Q8IX07 1006 aa23.32■■□□□ 1.32
LINC01550-201ENST00000499006 ZC3H15Q8WU90 426 aaKnown RBP23.32■■□□□ 1.32
LINC01550-201ENST00000499006 DDRGK1Q96HY6 314 aa23.32■■□□□ 1.32
LINC01550-201ENST00000499006 NMRK2Q9NPI5 230 aa23.32■■□□□ 1.32
LINC01550-201ENST00000499006 TCP10Q12799 353 aa23.31■■□□□ 1.32
LINC01550-201ENST00000499006 SBK1Q52WX2 424 aa23.31■■□□□ 1.32
LINC01550-201ENST00000499006 MCM9Q9NXL9 1143 aa23.31■■□□□ 1.32
LINC01550-201ENST00000499006 GGA3Q9NZ52 723 aa23.31■■□□□ 1.32
LINC01550-201ENST00000499006 CTNNA3Q9UI47 895 aa23.31■■□□□ 1.32
LINC01550-201ENST00000499006 ATRNL1Q5VV63 1379 aa23.31■■□□□ 1.32
LINC01550-201ENST00000499006 USP17L12C9JPN9 530 aa23.3■■□□□ 1.32
LINC01550-201ENST00000499006 USP17L21D6R901 530 aa23.3■■□□□ 1.32
LINC01550-201ENST00000499006 TNFAIP1Q13829 316 aa23.3■■□□□ 1.32
LINC01550-201ENST00000499006 APOBEC3FQ8IUX4 373 aaKnown RBP23.3■■□□□ 1.32
LINC01550-201ENST00000499006 ZNF526Q8TF50 670 aaPredicted RBP23.3■■□□□ 1.32
LINC01550-201ENST00000499006 FAM151AQ8WW52 585 aa23.3■■□□□ 1.32
LINC01550-201ENST00000499006 ARPP21Q9UBL0 812 aaPredicted RBP23.3■■□□□ 1.32
LINC01550-201ENST00000499006 HSPA4P34932 840 aa23.3■■□□□ 1.32
LINC01550-201ENST00000499006 SAP30BPQ9UHR5 308 aaKnown RBP23.3■■□□□ 1.32
LINC01550-201ENST00000499006 PALD1Q9ULE6 856 aa23.3■■□□□ 1.32
LINC01550-201ENST00000499006 TNNI2P48788 182 aa23.29■■□□□ 1.32
LINC01550-201ENST00000499006 C12orf60Q5U649 245 aa23.29■■□□□ 1.32
LINC01550-201ENST00000499006 SH3BP5LQ7L8J4 393 aa23.29■■□□□ 1.32
LINC01550-201ENST00000499006 SCAF8Q9UPN6 1271 aaKnown RBP23.29■■□□□ 1.32
LINC01550-201ENST00000499006 DDTLA6NHG4 134 aaPredicted RBP23.28■■□□□ 1.32
LINC01550-201ENST00000499006 CYP21A2P08686 494 aa23.28■■□□□ 1.32
LINC01550-201ENST00000499006 RASA3Q14644 834 aa23.28■■□□□ 1.32
LINC01550-201ENST00000499006 EAPPQ56P03 285 aaPredicted RBP23.28■■□□□ 1.32
LINC01550-201ENST00000499006 CREB3L3Q68CJ9 461 aa23.28■■□□□ 1.32
LINC01550-201ENST00000499006 KCNB2Q92953 911 aa23.28■■□□□ 1.32
LINC01550-201ENST00000499006 DHX36Q9H2U1 1008 aaKnown RBP23.28■■□□□ 1.32
LINC01550-201ENST00000499006 ANAPC4Q9UJX5 808 aa23.28■■□□□ 1.32
LINC01550-201ENST00000499006 CYP2D7A0A087X1C5 515 aa23.27■■□□□ 1.32
LINC01550-201ENST00000499006 SMIM22K7EJ46 135 aa23.27■■□□□ 1.32
LINC01550-201ENST00000499006 SLC27A2O14975 620 aa23.27■■□□□ 1.32
LINC01550-201ENST00000499006 CYP2D6P10635 497 aa23.27■■□□□ 1.32
LINC01550-201ENST00000499006 PLCD1P51178 756 aa23.27■■□□□ 1.32
LINC01550-201ENST00000499006 EVX2Q03828 476 aa23.27■■□□□ 1.32
LINC01550-201ENST00000499006 IMMTQ16891 758 aaKnown RBP23.27■■□□□ 1.32
LINC01550-201ENST00000499006 TMEM39BQ9GZU3 492 aa23.27■■□□□ 1.32
LINC01550-201ENST00000499006 NBPF3Q9H094 633 aa23.27■■□□□ 1.32
LINC01550-201ENST00000499006 DEFB129Q9H1M3 183 aa23.27■■□□□ 1.32
LINC01550-201ENST00000499006 ZNF213O14771 459 aa23.26■■□□□ 1.31
LINC01550-201ENST00000499006 POLR3DP05423 398 aaPredicted RBP23.26■■□□□ 1.31
LINC01550-201ENST00000499006 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
LINC01550-201ENST00000499006 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
LINC01550-201ENST00000499006 PPARAQ07869 468 aa23.26■■□□□ 1.31
LINC01550-201ENST00000499006 DCPSQ96C86 337 aaKnown RBP23.26■■□□□ 1.31
LINC01550-201ENST00000499006 TEPSINQ96N21 525 aa23.26■■□□□ 1.31
LINC01550-201ENST00000499006 ROBO3Q96MS0 1386 aa23.26■■□□□ 1.31
LINC01550-201ENST00000499006 MINDY4BA8MYZ0 360 aa23.25■■□□□ 1.31
LINC01550-201ENST00000499006 HAND2P61296 217 aa23.25■■□□□ 1.31
LINC01550-201ENST00000499006 TTC6Q86TZ1 520 aa23.25■■□□□ 1.31
LINC01550-201ENST00000499006 AMOTL1Q8IY63 956 aa23.25■■□□□ 1.31
LINC01550-201ENST00000499006 UPF2Q9HAU5 1272 aaKnown RBP23.25■■□□□ 1.31
LINC01550-201ENST00000499006 TAF6LQ9Y6J9 622 aa23.25■■□□□ 1.31
LINC01550-201ENST00000499006 SLC4A8Q2Y0W8 1093 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 TSGA10IPQ3SY00 556 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 RNF20Q5VTR2 975 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 RASEFQ8IZ41 740 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 C22orf23Q9BZE7 217 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 PPP2R3BQ9Y5P8 575 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 MCCP23508 829 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 RBM25P49756 843 aaKnown RBP23.24■■□□□ 1.31
LINC01550-201ENST00000499006 CTDSPL2Q05D32 466 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 METTL16Q86W50 562 aaKnown RBP23.24■■□□□ 1.31
LINC01550-201ENST00000499006 LDHDQ86WU2 507 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 ZSCAN29Q8IWY8 852 aaPredicted RBP23.24■■□□□ 1.31
LINC01550-201ENST00000499006 CDAN1Q8IWY9 1227 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 TBC1D32Q96NH3 1257 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 EHD4Q9H223 541 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 PI4KBQ9UBF8 816 aa23.24■■□□□ 1.31
LINC01550-201ENST00000499006 HLA-DOAP06340 250 aa23.23■■□□□ 1.31
LINC01550-201ENST00000499006 GABPAQ06546 454 aa23.23■■□□□ 1.31
LINC01550-201ENST00000499006 TBC1D10CQ8IV04 446 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms