RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 USP2O75604 605 aaPredicted RBP20.26■□□□□ 0.83
PRKCB-210ENST00000498739 ECE1P42892 770 aa20.26■□□□□ 0.83
PRKCB-210ENST00000498739 UBE3CQ15386 1083 aa20.26■□□□□ 0.83
PRKCB-210ENST00000498739 PLEKHM2Q8IWE5 1019 aa20.26■□□□□ 0.83
PRKCB-210ENST00000498739 TGFBRAP1Q8WUH2 860 aa20.26■□□□□ 0.83
PRKCB-210ENST00000498739 CAPNS2Q96L46 248 aa20.26■□□□□ 0.83
PRKCB-210ENST00000498739 OSBPL5Q9H0X9 879 aaPredicted RBP20.26■□□□□ 0.83
PRKCB-210ENST00000498739 WDR33Q9C0J8 1336 aaKnown RBP20.26■□□□□ 0.83
PRKCB-210ENST00000498739 NPM3O75607 178 aaKnown RBP20.25■□□□□ 0.83
PRKCB-210ENST00000498739 IREB2P48200 963 aaKnown RBP20.25■□□□□ 0.83
PRKCB-210ENST00000498739 ZNF157P51786 506 aaPredicted RBP20.25■□□□□ 0.83
PRKCB-210ENST00000498739 MAP3K11Q16584 847 aa20.25■□□□□ 0.83
PRKCB-210ENST00000498739 DCAF15Q66K64 600 aa20.25■□□□□ 0.83
PRKCB-210ENST00000498739 SH3BP5LQ7L8J4 393 aa20.25■□□□□ 0.83
PRKCB-210ENST00000498739 MAPKAPK5Q8IW41 473 aa20.25■□□□□ 0.83
PRKCB-210ENST00000498739 CSRNP1Q96S65 589 aa20.25■□□□□ 0.83
PRKCB-210ENST00000498739 RIOK1Q9BRS2 568 aaKnown RBP20.25■□□□□ 0.83
PRKCB-210ENST00000498739 FSD1Q9BTV5 496 aa20.25■□□□□ 0.83
PRKCB-210ENST00000498739 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.25■□□□□ 0.83
PRKCB-210ENST00000498739 FLT1P17948 1338 aa20.25■□□□□ 0.83
PRKCB-210ENST00000498739 DDTLA6NHG4 134 aaPredicted RBP20.24■□□□□ 0.83
PRKCB-210ENST00000498739 PDE4AP27815 886 aa20.24■□□□□ 0.83
PRKCB-210ENST00000498739 USP5P45974 858 aa20.24■□□□□ 0.83
PRKCB-210ENST00000498739 MIGA2Q7L4E1 593 aa20.24■□□□□ 0.83
PRKCB-210ENST00000498739 LRRFIP1Q32MZ4 808 aaKnown RBP20.23■□□□□ 0.83
PRKCB-210ENST00000498739 LDLRAD1Q5T700 205 aa20.23■□□□□ 0.83
PRKCB-210ENST00000498739 LCORLQ8N3X6 602 aa20.23■□□□□ 0.83
PRKCB-210ENST00000498739 EVI5LQ96CN4 794 aa20.23■□□□□ 0.83
PRKCB-210ENST00000498739 OSBPL3Q9H4L5 887 aa20.23■□□□□ 0.83
PRKCB-210ENST00000498739 ARMT1Q9H993 441 aa20.23■□□□□ 0.83
PRKCB-210ENST00000498739 COL2A1P02458 1487 aaPredicted RBP20.23■□□□□ 0.83
PRKCB-210ENST00000498739 ATRNL1Q5VV63 1379 aa20.22■□□□□ 0.83
PRKCB-210ENST00000498739 RNF113AO15541 343 aaKnown RBP20.22■□□□□ 0.83
PRKCB-210ENST00000498739 MBD4O95243 580 aa20.22■□□□□ 0.83
PRKCB-210ENST00000498739 ZFYP08048 801 aaPredicted RBP20.22■□□□□ 0.83
PRKCB-210ENST00000498739 CENPQQ7L2Z9 268 aaPredicted RBP20.22■□□□□ 0.83
PRKCB-210ENST00000498739 ANKRD13AQ8IZ07 590 aa20.22■□□□□ 0.83
PRKCB-210ENST00000498739 CCDC102AQ96A19 550 aa20.22■□□□□ 0.83
PRKCB-210ENST00000498739 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
PRKCB-210ENST00000498739 ZNF341Q9BYN7 854 aa20.22■□□□□ 0.83
PRKCB-210ENST00000498739 CRNKL1Q9BZJ0 848 aaKnown RBP20.22■□□□□ 0.83
PRKCB-210ENST00000498739 MYH7P12883 1935 aa20.21■□□□□ 0.83
PRKCB-210ENST00000498739 TRIM6-TRIM34B2RNG4 842 aa20.21■□□□□ 0.83
PRKCB-210ENST00000498739 AOC2O75106 756 aa20.21■□□□□ 0.83
PRKCB-210ENST00000498739 SLC10A3P09131 477 aa20.21■□□□□ 0.83
PRKCB-210ENST00000498739 RASAL3Q86YV0 1011 aa20.21■□□□□ 0.83
PRKCB-210ENST00000498739 APPBP2Q92624 585 aa20.21■□□□□ 0.83
PRKCB-210ENST00000498739 AIDAQ96BJ3 306 aa20.21■□□□□ 0.83
PRKCB-210ENST00000498739 WRNIP1Q96S55 665 aa20.21■□□□□ 0.83
PRKCB-210ENST00000498739 PUS7LQ9H0K6 701 aaKnown RBP20.21■□□□□ 0.83
PRKCB-210ENST00000498739 SAP30BPQ9UHR5 308 aaKnown RBP20.21■□□□□ 0.83
PRKCB-210ENST00000498739 FAM155AB1AL88 458 aaPredicted RBP20.2■□□□□ 0.82
PRKCB-210ENST00000498739 MAP3K9P80192 1104 aa20.2■□□□□ 0.82
PRKCB-210ENST00000498739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.2■□□□□ 0.82
PRKCB-210ENST00000498739 RILPL2Q969X0 211 aa20.2■□□□□ 0.82
PRKCB-210ENST00000498739 CLMNQ96JQ2 1002 aa20.2■□□□□ 0.82
PRKCB-210ENST00000498739 FOCADQ5VW36 1801 aa20.2■□□□□ 0.82
PRKCB-210ENST00000498739 CDK5RAP2Q96SN8 1893 aa20.2■□□□□ 0.82
PRKCB-210ENST00000498739 UNCXA6NJT0 531 aa20.19■□□□□ 0.82
PRKCB-210ENST00000498739 SLURP2P0DP57 97 aa20.19■□□□□ 0.82
PRKCB-210ENST00000498739 SLC4A8Q2Y0W8 1093 aa20.19■□□□□ 0.82
PRKCB-210ENST00000498739 JMYQ8N9B5 988 aa20.19■□□□□ 0.82
PRKCB-210ENST00000498739 SDR42E1Q8WUS8 393 aa20.19■□□□□ 0.82
PRKCB-210ENST00000498739 OSBP2Q969R2 916 aa20.19■□□□□ 0.82
PRKCB-210ENST00000498739 SLC10A4Q96EP9 437 aa20.19■□□□□ 0.82
PRKCB-210ENST00000498739 DHX36Q9H2U1 1008 aaKnown RBP20.19■□□□□ 0.82
PRKCB-210ENST00000498739 PALD1Q9ULE6 856 aa20.19■□□□□ 0.82
PRKCB-210ENST00000498739 AK9Q5TCS8 1911 aa20.19■□□□□ 0.82
PRKCB-210ENST00000498739 OTOFQ9HC10 1997 aa20.18■□□□□ 0.82
PRKCB-210ENST00000498739 NOGQ13253 232 aa20.18■□□□□ 0.82
PRKCB-210ENST00000498739 VGLL4Q14135 290 aa20.18■□□□□ 0.82
PRKCB-210ENST00000498739 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.18■□□□□ 0.82
PRKCB-210ENST00000498739 ELP3Q9H9T3 547 aa20.18■□□□□ 0.82
PRKCB-210ENST00000498739 CSADQ9Y600 493 aa20.18■□□□□ 0.82
PRKCB-210ENST00000498739 THSD7BQ9C0I4 1608 aa20.17■□□□□ 0.82
PRKCB-210ENST00000498739 FAM196BA6NMK8 535 aa20.17■□□□□ 0.82
PRKCB-210ENST00000498739 PRKAB2O43741 272 aa20.17■□□□□ 0.82
PRKCB-210ENST00000498739 HLA-DOAP06340 250 aa20.17■□□□□ 0.82
PRKCB-210ENST00000498739 MKRN3Q13064 507 aaKnown RBP20.17■□□□□ 0.82
PRKCB-210ENST00000498739 ZKSCAN4Q969J2 545 aaPredicted RBP20.17■□□□□ 0.82
PRKCB-210ENST00000498739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.17■□□□□ 0.82
PRKCB-210ENST00000498739 PI4KBQ9UBF8 816 aa20.17■□□□□ 0.82
PRKCB-210ENST00000498739 M0R2C6 588 aa20.16■□□□□ 0.82
PRKCB-210ENST00000498739 INPP5BP32019 993 aa20.16■□□□□ 0.82
PRKCB-210ENST00000498739 MAP2K2P36507 400 aa20.16■□□□□ 0.82
PRKCB-210ENST00000498739 ZMYM1Q5SVZ6 1142 aa20.16■□□□□ 0.82
PRKCB-210ENST00000498739 ZIC5Q96T25 663 aa20.16■□□□□ 0.82
PRKCB-210ENST00000498739 SEC62Q99442 399 aaKnown RBP20.16■□□□□ 0.82
PRKCB-210ENST00000498739 TRIM34Q9BYJ4 488 aa20.16■□□□□ 0.82
PRKCB-210ENST00000498739 DCP1AQ9NPI6 582 aaPredicted RBP20.16■□□□□ 0.82
PRKCB-210ENST00000498739 ZNF112Q9UJU3 913 aa20.16■□□□□ 0.82
PRKCB-210ENST00000498739 SLC4A4Q9Y6R1 1079 aa20.16■□□□□ 0.82
PRKCB-210ENST00000498739 GPAA1O43292 621 aa20.15■□□□□ 0.82
PRKCB-210ENST00000498739 TBC1D12O60347 775 aa20.15■□□□□ 0.82
PRKCB-210ENST00000498739 KIF23Q02241 960 aaPredicted RBP20.15■□□□□ 0.82
PRKCB-210ENST00000498739 MAP3K10Q02779 954 aa20.15■□□□□ 0.82
PRKCB-210ENST00000498739 TTC22Q5TAA0 569 aa20.15■□□□□ 0.82
PRKCB-210ENST00000498739 SPRYD7Q5W111 196 aa20.15■□□□□ 0.82
PRKCB-210ENST00000498739 CRACR2BQ8N4Y2 399 aaPredicted RBP20.15■□□□□ 0.82
PRKCB-210ENST00000498739 STRBPQ96SI9 672 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms