RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 MTMR10Q9NXD2 777 aa7.35□□□□□ -1.23
SPTA1-209ENST00000498708 LAMA2P24043 3122 aaKnown RBP7.35□□□□□ -1.23
SPTA1-209ENST00000498708 LAMB2P55268 1798 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 BBOX1O75936 387 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 NTSR2O95665 410 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 SP3Q02447 781 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 NR5A1Q13285 461 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 CRHR2Q13324 411 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 PRKG1Q13976 671 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 DCTN1Q14203 1278 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 MCM10Q7L590 875 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 NBPF11Q86T75 865 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 FOXJ1Q92949 421 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 NLRP3Q96P20 1036 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 NXF1Q9UBU9 619 aaKnown RBP7.34□□□□□ -1.23
SPTA1-209ENST00000498708 FZD1Q9UP38 647 aa7.34□□□□□ -1.23
SPTA1-209ENST00000498708 ZSWIM8A7E2V4 1837 aa7.34□□□□□ -1.24
SPTA1-209ENST00000498708 ECE2O60344 883 aa7.33□□□□□ -1.24
SPTA1-209ENST00000498708 VIL1P09327 827 aaKnown RBP7.33□□□□□ -1.24
SPTA1-209ENST00000498708 U2AF1L5P0DN76 240 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-209ENST00000498708 CLK2P49760 499 aaKnown RBP7.33□□□□□ -1.24
SPTA1-209ENST00000498708 WDR4P57081 412 aaKnown RBP7.33□□□□□ -1.24
SPTA1-209ENST00000498708 ZNF280AP59817 542 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-209ENST00000498708 U2AF1Q01081 240 aaKnown RBP eCLIP7.33□□□□□ -1.247e-7■■■□□ 15
SPTA1-209ENST00000498708 ARID5BQ14865 1188 aa7.33□□□□□ -1.24
SPTA1-209ENST00000498708 MTFR1Q15390 333 aa7.33□□□□□ -1.24
SPTA1-209ENST00000498708 WASHC4Q2M389 1173 aa7.33□□□□□ -1.24
SPTA1-209ENST00000498708 TTLL7Q6ZT98 887 aa7.33□□□□□ -1.24
SPTA1-209ENST00000498708 UBE2Q1Q7Z7E8 422 aa7.33□□□□□ -1.24
SPTA1-209ENST00000498708 MIS18AQ9NYP9 233 aa7.33□□□□□ -1.24
SPTA1-209ENST00000498708 STK17AQ9UEE5 414 aa7.33□□□□□ -1.24
SPTA1-209ENST00000498708 TTC28Q96AY4 2481 aa7.33□□□□□ -1.24
SPTA1-209ENST00000498708 COL3A1P02461 1466 aaPredicted RBP7.32□□□□□ -1.24
SPTA1-209ENST00000498708 MANSC4A6NHS7 340 aaPredicted RBP7.32□□□□□ -1.24
SPTA1-209ENST00000498708 SNRPA1P09661 255 aaKnown RBP7.32□□□□□ -1.24
SPTA1-209ENST00000498708 TIMP2P16035 220 aa7.32□□□□□ -1.24
SPTA1-209ENST00000498708 PLA2G5P39877 138 aa7.32□□□□□ -1.24
SPTA1-209ENST00000498708 TCIRG1Q13488 830 aa7.32□□□□□ -1.24
SPTA1-209ENST00000498708 LDLRAD1Q5T700 205 aa7.32□□□□□ -1.24
SPTA1-209ENST00000498708 MRPL14Q6P1L8 145 aaKnown RBP7.32□□□□□ -1.24
SPTA1-209ENST00000498708 RTF1Q92541 710 aaKnown RBP7.32□□□□□ -1.24
SPTA1-209ENST00000498708 CFAP53Q96M91 514 aa7.32□□□□□ -1.24
SPTA1-209ENST00000498708 ZFP42Q96MM3 310 aa7.32□□□□□ -1.24
SPTA1-209ENST00000498708 PTPN18Q99952 460 aa7.32□□□□□ -1.24
SPTA1-209ENST00000498708 POLLQ9UGP5 575 aa7.32□□□□□ -1.24
SPTA1-209ENST00000498708 NR2E3Q9Y5X4 410 aa7.32□□□□□ -1.24
SPTA1-209ENST00000498708 ANKRD36CQ5JPF3 1778 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 ERVV-1B6SEH8 477 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 INHBEP58166 350 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 SLC10A5Q5PT55 438 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 ZNF34Q8IZ26 560 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 HTATIP2Q9BUP3 242 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 KLF16Q9BXK1 252 aaPredicted RBP7.31□□□□□ -1.24
SPTA1-209ENST00000498708 MYOZ2Q9NPC6 264 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 NUDCQ9Y266 331 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 ZNF646O15015 1829 aaPredicted RBP7.31□□□□□ -1.24
SPTA1-209ENST00000498708 IBTKQ9P2D0 1353 aaPredicted RBP7.31□□□□□ -1.24
SPTA1-209ENST00000498708 LAMB1P07942 1786 aa7.31□□□□□ -1.24
SPTA1-209ENST00000498708 MAP3K15Q6ZN16 1313 aa7.3□□□□□ -1.24
SPTA1-209ENST00000498708 LRRC37AA6NMS7 1700 aa7.3□□□□□ -1.24
SPTA1-209ENST00000498708 HCLS1P14317 486 aaPredicted RBP7.3□□□□□ -1.24
SPTA1-209ENST00000498708 GRAPQ13588 217 aa7.3□□□□□ -1.24
SPTA1-209ENST00000498708 RTL5Q5HYW3 569 aaPredicted RBP7.3□□□□□ -1.24
SPTA1-209ENST00000498708 ARMC9Q7Z3E5 817 aa7.3□□□□□ -1.24
SPTA1-209ENST00000498708 GRAPLQ8TC17 118 aaPredicted RBP7.3□□□□□ -1.24
SPTA1-209ENST00000498708 GPKOWQ92917 476 aaPredicted RBP eCLIP7.3□□□□□ -1.24
SPTA1-209ENST00000498708 IRF7Q92985 503 aa7.3□□□□□ -1.24
SPTA1-209ENST00000498708 SLC10A4Q96EP9 437 aa7.3□□□□□ -1.24
SPTA1-209ENST00000498708 CLMNQ96JQ2 1002 aa7.3□□□□□ -1.24
SPTA1-209ENST00000498708 ANGEL1Q9UNK9 670 aaKnown RBP7.3□□□□□ -1.24
SPTA1-209ENST00000498708 NSFL1CQ9UNZ2 370 aaKnown RBP7.3□□□□□ -1.24
SPTA1-209ENST00000498708 ALPK3Q96L96 1907 aa7.3□□□□□ -1.24
SPTA1-209ENST00000498708 DDX60Q8IY21 1712 aaKnown RBP7.3□□□□□ -1.24
SPTA1-209ENST00000498708 CDH23Q9H251 3354 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 COL4A1P02462 1669 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 PPP2R1AP30153 589 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 GPSM2P81274 684 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 DDX46Q7L014 1031 aaKnown RBP7.29□□□□□ -1.24
SPTA1-209ENST00000498708 FAM122AQ96E09 287 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 WNK4Q96J92 1243 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 GUCD1Q96NT3 240 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 GMLQ99445 158 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 GDF15Q99988 308 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 C1QTNF2Q9BXJ5 285 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 ARHGAP39Q9C0H5 1083 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 POLR3EQ9NVU0 708 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 RRP7AQ9Y3A4 280 aaKnown RBP7.29□□□□□ -1.24
SPTA1-209ENST00000498708 MAP4K5Q9Y4K4 846 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 CEMIPQ8WUJ3 1361 aa7.29□□□□□ -1.24
SPTA1-209ENST00000498708 RPTORQ8N122 1335 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 UPP2O95045 317 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 ZIC2O95409 532 aaPredicted RBP7.28□□□□□ -1.24
SPTA1-209ENST00000498708 USP17L8P0C7I0 530 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 ZBTB48P10074 688 aaPredicted RBP7.28□□□□□ -1.24
SPTA1-209ENST00000498708 MYL6BP14649 208 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 BMP8BP34820 402 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 NF2P35240 595 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 GRM5P41594 1212 aa7.28□□□□□ -1.24
SPTA1-209ENST00000498708 GJA8P48165 433 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms