RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 DEFB115Q30KQ5 88 aa23.92■■□□□ 1.42
HLA-B-255ENST00000498007 CENPQQ7L2Z9 268 aaPredicted RBP23.92■■□□□ 1.42
HLA-B-255ENST00000498007 ARMC9Q7Z3E5 817 aa23.92■■□□□ 1.42
HLA-B-255ENST00000498007 CERS3Q8IU89 383 aa23.91■■□□□ 1.42
HLA-B-255ENST00000498007 MAPKAPK5Q8IW41 473 aa23.91■■□□□ 1.42
HLA-B-255ENST00000498007 TGFBRAP1Q8WUH2 860 aa23.91■■□□□ 1.42
HLA-B-255ENST00000498007 RIOK1Q9BRS2 568 aaKnown RBP23.91■■□□□ 1.42
HLA-B-255ENST00000498007 NAV1Q8NEY1 1877 aa23.91■■□□□ 1.42
HLA-B-255ENST00000498007 FLT1P17948 1338 aa23.9■■□□□ 1.42
HLA-B-255ENST00000498007 UBE3CQ15386 1083 aa23.9■■□□□ 1.42
HLA-B-255ENST00000498007 CYP4F22Q6NT55 531 aa23.9■■□□□ 1.42
HLA-B-255ENST00000498007 CSRNP1Q96S65 589 aa23.9■■□□□ 1.42
HLA-B-255ENST00000498007 OSBPL5Q9H0X9 879 aaPredicted RBP23.9■■□□□ 1.42
HLA-B-255ENST00000498007 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.9■■□□□ 1.42
HLA-B-255ENST00000498007 TRIM6-TRIM34B2RNG4 842 aa23.89■■□□□ 1.41
HLA-B-255ENST00000498007 MBD4O95243 580 aa23.89■■□□□ 1.41
HLA-B-255ENST00000498007 USP5P45974 858 aa23.89■■□□□ 1.41
HLA-B-255ENST00000498007 SH3BP5LQ7L8J4 393 aa23.89■■□□□ 1.41
HLA-B-255ENST00000498007 LCORLQ8N3X6 602 aa23.89■■□□□ 1.41
HLA-B-255ENST00000498007 KLRG1Q96E93 195 aa23.89■■□□□ 1.41
HLA-B-255ENST00000498007 HOOK2Q96ED9 719 aa23.89■■□□□ 1.41
HLA-B-255ENST00000498007 OSBPL3Q9H4L5 887 aa23.89■■□□□ 1.41
HLA-B-255ENST00000498007 ARMT1Q9H993 441 aa23.89■■□□□ 1.41
HLA-B-255ENST00000498007 DDTLA6NHG4 134 aaPredicted RBP23.88■■□□□ 1.41
HLA-B-255ENST00000498007 RNF113AO15541 343 aaKnown RBP23.88■■□□□ 1.41
HLA-B-255ENST00000498007 IREB2P48200 963 aaKnown RBP23.88■■□□□ 1.41
HLA-B-255ENST00000498007 LRRFIP1Q32MZ4 808 aaKnown RBP23.88■■□□□ 1.41
HLA-B-255ENST00000498007 MIGA2Q7L4E1 593 aa23.88■■□□□ 1.41
HLA-B-255ENST00000498007 DNAJC5GQ8N7S2 189 aa23.88■■□□□ 1.41
HLA-B-255ENST00000498007 EVI5LQ96CN4 794 aa23.88■■□□□ 1.41
HLA-B-255ENST00000498007 COL2A1P02458 1487 aaPredicted RBP23.87■■□□□ 1.41
HLA-B-255ENST00000498007 MYH1P12882 1939 aa23.87■■□□□ 1.41
HLA-B-255ENST00000498007 NPM3O75607 178 aaKnown RBP23.87■■□□□ 1.41
HLA-B-255ENST00000498007 ZFYP08048 801 aaPredicted RBP23.87■■□□□ 1.41
HLA-B-255ENST00000498007 VEGFBP49765 207 aa23.87■■□□□ 1.41
HLA-B-255ENST00000498007 DCAF15Q66K64 600 aa23.87■■□□□ 1.41
HLA-B-255ENST00000498007 RGMBQ6NW40 437 aa23.87■■□□□ 1.41
HLA-B-255ENST00000498007 RILPL2Q969X0 211 aa23.87■■□□□ 1.41
HLA-B-255ENST00000498007 HHIPL1Q96JK4 782 aa23.87■■□□□ 1.41
HLA-B-255ENST00000498007 CAPNS2Q96L46 248 aa23.87■■□□□ 1.41
HLA-B-255ENST00000498007 CRNKL1Q9BZJ0 848 aaKnown RBP23.87■■□□□ 1.41
HLA-B-255ENST00000498007 SAP30BPQ9UHR5 308 aaKnown RBP23.87■■□□□ 1.41
HLA-B-255ENST00000498007 ATRNL1Q5VV63 1379 aa23.87■■□□□ 1.41
HLA-B-255ENST00000498007 DDX60LQ5H9U9 1706 aaKnown RBP23.87■■□□□ 1.41
HLA-B-255ENST00000498007 USP2O75604 605 aaPredicted RBP23.86■■□□□ 1.41
HLA-B-255ENST00000498007 ZNF157P51786 506 aaPredicted RBP23.86■■□□□ 1.41
HLA-B-255ENST00000498007 APPBP2Q92624 585 aa23.86■■□□□ 1.41
HLA-B-255ENST00000498007 AIDAQ96BJ3 306 aa23.86■■□□□ 1.41
HLA-B-255ENST00000498007 PUS7LQ9H0K6 701 aaKnown RBP23.86■■□□□ 1.41
HLA-B-255ENST00000498007 ECE1P42892 770 aa23.85■■□□□ 1.41
HLA-B-255ENST00000498007 MAP3K11Q16584 847 aa23.85■■□□□ 1.41
HLA-B-255ENST00000498007 SLC4A8Q2Y0W8 1093 aa23.85■■□□□ 1.41
HLA-B-255ENST00000498007 WDR33Q9C0J8 1336 aaKnown RBP23.84■■□□□ 1.41
HLA-B-255ENST00000498007 SIPA1L1O43166 1804 aa23.84■■□□□ 1.41
HLA-B-255ENST00000498007 SDR42E1Q8WUS8 393 aa23.84■■□□□ 1.41
HLA-B-255ENST00000498007 CLMNQ96JQ2 1002 aa23.84■■□□□ 1.41
HLA-B-255ENST00000498007 WRNIP1Q96S55 665 aa23.84■■□□□ 1.41
HLA-B-255ENST00000498007 ZNF341Q9BYN7 854 aa23.84■■□□□ 1.41
HLA-B-255ENST00000498007 THSD7BQ9C0I4 1608 aa23.84■■□□□ 1.41
HLA-B-255ENST00000498007 SLURP2P0DP57 97 aa23.83■■□□□ 1.41
HLA-B-255ENST00000498007 LDLRAD1Q5T700 205 aa23.83■■□□□ 1.41
HLA-B-255ENST00000498007 OSBP2Q969R2 916 aa23.83■■□□□ 1.41
HLA-B-255ENST00000498007 M0R2C6 588 aa23.82■■□□□ 1.4
HLA-B-255ENST00000498007 TTC22Q5TAA0 569 aa23.82■■□□□ 1.4
HLA-B-255ENST00000498007 SKAP1Q86WV1 359 aa23.82■■□□□ 1.4
HLA-B-255ENST00000498007 RASAL3Q86YV0 1011 aa23.82■■□□□ 1.4
HLA-B-255ENST00000498007 ANKRD13AQ8IZ07 590 aa23.82■■□□□ 1.4
HLA-B-255ENST00000498007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.82■■□□□ 1.46e-6■□□□□ 9
HLA-B-255ENST00000498007 PALD1Q9ULE6 856 aa23.82■■□□□ 1.4
HLA-B-255ENST00000498007 FAM196BA6NMK8 535 aa23.81■■□□□ 1.4
HLA-B-255ENST00000498007 PRKAB2O43741 272 aa23.81■■□□□ 1.4
HLA-B-255ENST00000498007 AOC2O75106 756 aa23.81■■□□□ 1.4
HLA-B-255ENST00000498007 SLC10A3P09131 477 aa23.81■■□□□ 1.4
HLA-B-255ENST00000498007 ERICH6BQ5W0A0 696 aa23.81■■□□□ 1.4
HLA-B-255ENST00000498007 SEC62Q99442 399 aaKnown RBP23.81■■□□□ 1.4
HLA-B-255ENST00000498007 DHX36Q9H2U1 1008 aaKnown RBP23.81■■□□□ 1.4
HLA-B-255ENST00000498007 PPP4R2Q9NY27 417 aa23.81■■□□□ 1.4
HLA-B-255ENST00000498007 CSADQ9Y600 493 aa23.81■■□□□ 1.4
HLA-B-255ENST00000498007 SLC4A4Q9Y6R1 1079 aa23.81■■□□□ 1.4
HLA-B-255ENST00000498007 BAZ2AQ9UIF9 1905 aaKnown RBP23.8■■□□□ 1.4
HLA-B-255ENST00000498007 GPAA1O43292 621 aa23.8■■□□□ 1.4
HLA-B-255ENST00000498007 HLA-DOAP06340 250 aa23.8■■□□□ 1.4
HLA-B-255ENST00000498007 GSPT1P15170 499 aaKnown RBP23.8■■□□□ 1.4
HLA-B-255ENST00000498007 MKRN3Q13064 507 aaKnown RBP23.8■■□□□ 1.4
HLA-B-255ENST00000498007 VGLL4Q14135 290 aa23.8■■□□□ 1.4
HLA-B-255ENST00000498007 ZMYM1Q5SVZ6 1142 aa23.8■■□□□ 1.4
HLA-B-255ENST00000498007 CCDC102AQ96A19 550 aa23.8■■□□□ 1.4
HLA-B-255ENST00000498007 ELP3Q9H9T3 547 aa23.8■■□□□ 1.4
HLA-B-255ENST00000498007 FAM155AB1AL88 458 aaPredicted RBP23.79■■□□□ 1.4
HLA-B-255ENST00000498007 MAP3K9P80192 1104 aa23.79■■□□□ 1.4
HLA-B-255ENST00000498007 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.79■■□□□ 1.4
HLA-B-255ENST00000498007 ZKSCAN4Q969J2 545 aaPredicted RBP23.79■■□□□ 1.4
HLA-B-255ENST00000498007 SLC10A4Q96EP9 437 aa23.79■■□□□ 1.4
HLA-B-255ENST00000498007 TRIM34Q9BYJ4 488 aa23.79■■□□□ 1.4
HLA-B-255ENST00000498007 PI4KBQ9UBF8 816 aa23.79■■□□□ 1.4
HLA-B-255ENST00000498007 INPP5BP32019 993 aa23.78■■□□□ 1.4
HLA-B-255ENST00000498007 CRACR2BQ8N4Y2 399 aaPredicted RBP23.78■■□□□ 1.4
HLA-B-255ENST00000498007 STRBPQ96SI9 672 aaKnown RBP23.78■■□□□ 1.4
HLA-B-255ENST00000498007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.78■■□□□ 1.4
HLA-B-255ENST00000498007 DCP1AQ9NPI6 582 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms