RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 PTPRAP18433 802 aa27.07■■□□□ 1.92
CLIC4-204ENST00000497755 PRKCZQ05513 592 aa27.07■■□□□ 1.92
CLIC4-204ENST00000497755 CCDC102BQ68D86 513 aa27.07■■□□□ 1.92
CLIC4-204ENST00000497755 UBE2Q1Q7Z7E8 422 aa27.07■■□□□ 1.92
CLIC4-204ENST00000497755 AFG3L2Q9Y4W6 797 aa27.07■■□□□ 1.92
CLIC4-204ENST00000497755 GAKO14976 1311 aa27.07■■□□□ 1.92
CLIC4-204ENST00000497755 A0A0G2JLL6 359 aaPredicted RBP27.06■■□□□ 1.92
CLIC4-204ENST00000497755 FCGRTP55899 365 aa27.06■■□□□ 1.92
CLIC4-204ENST00000497755 FASTKD5Q7L8L6 764 aaKnown RBP27.06■■□□□ 1.92
CLIC4-204ENST00000497755 PRRT2Q7Z6L0 340 aaPredicted RBP27.06■■□□□ 1.92
CLIC4-204ENST00000497755 DPF3Q92784 378 aa27.06■■□□□ 1.92
CLIC4-204ENST00000497755 GABRQQ9UN88 632 aa27.06■■□□□ 1.92
CLIC4-204ENST00000497755 LRRFIP2Q9Y608 721 aaKnown RBP27.06■■□□□ 1.92
CLIC4-204ENST00000497755 MGAMO43451 1857 aa27.05■■□□□ 1.92
CLIC4-204ENST00000497755 SLURP2P0DP57 97 aa27.05■■□□□ 1.92
CLIC4-204ENST00000497755 TIMM10P62072 90 aa27.05■■□□□ 1.92
CLIC4-204ENST00000497755 RNF208Q9H0X6 261 aa27.05■■□□□ 1.92
CLIC4-204ENST00000497755 COPRSQ9NQ92 184 aa27.05■■□□□ 1.92
CLIC4-204ENST00000497755 PICK1Q9NRD5 415 aa27.05■■□□□ 1.92
CLIC4-204ENST00000497755 BIN2Q9UBW5 565 aaPredicted RBP27.05■■□□□ 1.92
CLIC4-204ENST00000497755 NOB1Q9ULX3 412 aaKnown RBP27.05■■□□□ 1.92
CLIC4-204ENST00000497755 DDTLA6NHG4 134 aaPredicted RBP27.04■■□□□ 1.92
CLIC4-204ENST00000497755 TRMT2AQ8IZ69 625 aaKnown RBP27.04■■□□□ 1.92
CLIC4-204ENST00000497755 ZGPATQ8N5A5 531 aaKnown RBP27.04■■□□□ 1.92
CLIC4-204ENST00000497755 FAM163AQ96GL9 167 aaPredicted RBP27.04■■□□□ 1.92
CLIC4-204ENST00000497755 UBXN2AP68543 259 aa27.03■■□□□ 1.92
CLIC4-204ENST00000497755 RASGRF1Q13972 1273 aa27.03■■□□□ 1.92
CLIC4-204ENST00000497755 RFX7Q2KHR2 1363 aa27.03■■□□□ 1.92
CLIC4-204ENST00000497755 CHRDL2Q6WN34 429 aa27.03■■□□□ 1.92
CLIC4-204ENST00000497755 ZSCAN29Q8IWY8 852 aaPredicted RBP27.03■■□□□ 1.92
CLIC4-204ENST00000497755 DDX4Q9NQI0 724 aaKnown RBP27.03■■□□□ 1.92
CLIC4-204ENST00000497755 GADL1Q6ZQY3 521 aa27.02■■□□□ 1.92
CLIC4-204ENST00000497755 SLAIN1Q8ND83 568 aa27.02■■□□□ 1.92
CLIC4-204ENST00000497755 ABCF2Q9UG63 623 aa27.02■■□□□ 1.92
CLIC4-204ENST00000497755 SLC45A1Q9Y2W3 748 aa27.02■■□□□ 1.92
CLIC4-204ENST00000497755 DOCK2Q92608 1830 aa27.02■■□□□ 1.92
CLIC4-204ENST00000497755 CTNND1O60716 968 aaKnown RBP27.01■■□□□ 1.91
CLIC4-204ENST00000497755 DZIP1Q86YF9 867 aaKnown RBP27.01■■□□□ 1.91
CLIC4-204ENST00000497755 UNC93B1Q9H1C4 597 aa27.01■■□□□ 1.91
CLIC4-204ENST00000497755 HDAC5Q9UQL6 1122 aa27.01■■□□□ 1.91
CLIC4-204ENST00000497755 PDS5AQ29RF7 1337 aaKnown RBP27■■□□□ 1.91
CLIC4-204ENST00000497755 SLF2Q8IX21 1173 aa27■■□□□ 1.91
CLIC4-204ENST00000497755 U2AF1L4Q8WU68 220 aaKnown RBP27■■□□□ 1.91
CLIC4-204ENST00000497755 DOCK3Q8IZD9 2030 aa27■■□□□ 1.91
CLIC4-204ENST00000497755 PTPRFP10586 1907 aa26.99■■□□□ 1.91
CLIC4-204ENST00000497755 ADCY3O60266 1144 aa26.99■■□□□ 1.91
CLIC4-204ENST00000497755 BTDP43251 543 aa26.99■■□□□ 1.91
CLIC4-204ENST00000497755 FLT3LGP49771 235 aa26.99■■□□□ 1.91
CLIC4-204ENST00000497755 MEIS3Q99687 375 aa26.99■■□□□ 1.91
CLIC4-204ENST00000497755 API5Q9BZZ5 524 aaKnown RBP26.99■■□□□ 1.91
CLIC4-204ENST00000497755 RBM27Q9P2N5 1060 aaKnown RBP26.99■■□□□ 1.91
CLIC4-204ENST00000497755 PHIPQ8WWQ0 1821 aa26.98■■□□□ 1.91
CLIC4-204ENST00000497755 PICALMQ13492 652 aa26.98■■□□□ 1.91
CLIC4-204ENST00000497755 SPTY2D1Q68D10 685 aaPredicted RBP26.98■■□□□ 1.91
CLIC4-204ENST00000497755 HTATIP2Q9BUP3 242 aa26.98■■□□□ 1.91
CLIC4-204ENST00000497755 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.98■■□□□ 1.91
CLIC4-204ENST00000497755 GPR75-ASB3A0A0A6YYF3 556 aa26.97■■□□□ 1.91
CLIC4-204ENST00000497755 A0A1B0GUL7 405 aa26.97■■□□□ 1.91
CLIC4-204ENST00000497755 TRIM75PA6NK02 468 aa26.97■■□□□ 1.91
CLIC4-204ENST00000497755 SGPL1O95470 568 aa26.97■■□□□ 1.91
CLIC4-204ENST00000497755 RHBDL3P58872 404 aa26.97■■□□□ 1.91
CLIC4-204ENST00000497755 CCDC84Q86UT8 332 aaPredicted RBP26.97■■□□□ 1.91
CLIC4-204ENST00000497755 ZNF384Q8TF68 577 aa26.97■■□□□ 1.91
CLIC4-204ENST00000497755 XAGE2Q96GT9 111 aa26.97■■□□□ 1.91
CLIC4-204ENST00000497755 MROH7-TTC4A0A0A0MT08 1334 aa26.96■■□□□ 1.91
CLIC4-204ENST00000497755 TBC1D12O60347 775 aa26.96■■□□□ 1.91
CLIC4-204ENST00000497755 CT47B1P0C2W7 299 aaPredicted RBP26.96■■□□□ 1.91
CLIC4-204ENST00000497755 ELNP15502 786 aa26.96■■□□□ 1.91
CLIC4-204ENST00000497755 MECOMQ03112 1051 aa26.96■■□□□ 1.91
CLIC4-204ENST00000497755 TFCP2Q12800 502 aa26.96■■□□□ 1.91
CLIC4-204ENST00000497755 PXYLP1Q8TE99 480 aa26.96■■□□□ 1.91
CLIC4-204ENST00000497755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.96■■□□□ 1.91
CLIC4-204ENST00000497755 IRF5Q13568 498 aa26.95■■□□□ 1.9
CLIC4-204ENST00000497755 SMCR8Q8TEV9 937 aaPredicted RBP26.95■■□□□ 1.9
CLIC4-204ENST00000497755 PRO3102Q9H379 93 aa26.95■■□□□ 1.9
CLIC4-204ENST00000497755 AGTPBP1Q9UPW5 1226 aa26.95■■□□□ 1.9
CLIC4-204ENST00000497755 DOCK1Q14185 1865 aa26.95■■□□□ 1.9
CLIC4-204ENST00000497755 TNPO2O14787 897 aaKnown RBP26.94■■□□□ 1.9
CLIC4-204ENST00000497755 NPM3O75607 178 aaKnown RBP26.94■■□□□ 1.9
CLIC4-204ENST00000497755 FARP2O94887 1054 aaPredicted RBP26.94■■□□□ 1.9
CLIC4-204ENST00000497755 INHAP05111 366 aa26.94■■□□□ 1.9
CLIC4-204ENST00000497755 ERICH6Q7L0X2 663 aa26.94■■□□□ 1.9
CLIC4-204ENST00000497755 AKAP2Q9Y2D5 859 aa26.94■■□□□ 1.9
CLIC4-204ENST00000497755 MVPQ14764 893 aaKnown RBP26.93■■□□□ 1.9
CLIC4-204ENST00000497755 TREML2Q5T2D2 321 aa26.93■■□□□ 1.9
CLIC4-204ENST00000497755 NR2E3Q9Y5X4 410 aa26.93■■□□□ 1.9
CLIC4-204ENST00000497755 SRGAP3O43295 1099 aa26.92■■□□□ 1.9
CLIC4-204ENST00000497755 ANKRD13CQ8N6S4 541 aa26.92■■□□□ 1.9
CLIC4-204ENST00000497755 HMG20BQ9P0W2 317 aa26.92■■□□□ 1.9
CLIC4-204ENST00000497755 FAM196BA6NMK8 535 aa26.91■■□□□ 1.9
CLIC4-204ENST00000497755 ZBTB7BO15156 539 aaPredicted RBP26.91■■□□□ 1.9
CLIC4-204ENST00000497755 TFRCP02786 760 aaKnown RBP26.91■■□□□ 1.9
CLIC4-204ENST00000497755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.91■■□□□ 1.9
CLIC4-204ENST00000497755 SPP2Q13103 211 aa26.9■■□□□ 1.9
CLIC4-204ENST00000497755 MTX1Q13505 466 aa26.9■■□□□ 1.9
CLIC4-204ENST00000497755 TBC1D9Q6ZT07 1266 aa26.9■■□□□ 1.9
CLIC4-204ENST00000497755 NSUN4Q96CB9 384 aaKnown RBP26.9■■□□□ 1.9
CLIC4-204ENST00000497755 NEUROD6Q96NK8 337 aa26.9■■□□□ 1.9
CLIC4-204ENST00000497755 DEFB118Q96PH6 123 aa26.9■■□□□ 1.9
CLIC4-204ENST00000497755 GNAI3P08754 354 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms