RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PPP4R2Q9NY27 417 aa5.98□□□□□ -1.45
PSPC1-205ENST00000497722 CCDC39Q9UFE4 941 aa5.98□□□□□ -1.45
PSPC1-205ENST00000497722 GPN3Q9UHW5 284 aaPredicted RBP5.98□□□□□ -1.45
PSPC1-205ENST00000497722 WWC3Q9ULE0 1092 aa5.98□□□□□ -1.45
PSPC1-205ENST00000497722 ENC1O14682 589 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 SLFN14P0C7P3 912 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 BMP6P22004 513 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 NME2P22392 152 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 COL19A1Q14993 1142 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 ZC3H12AQ5D1E8 599 aaKnown RBP5.97□□□□□ -1.45
PSPC1-205ENST00000497722 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 WFDC3Q8IUB2 231 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 SULF2Q8IWU5 870 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 ZSCAN29Q8IWY8 852 aaPredicted RBP5.97□□□□□ -1.45
PSPC1-205ENST00000497722 SRCIN1Q9C0H9 1055 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 ATXN3LQ9H3M9 355 aa5.97□□□□□ -1.45
PSPC1-205ENST00000497722 ZC3H7BQ9UGR2 993 aaKnown RBP5.97□□□□□ -1.45
PSPC1-205ENST00000497722 CYP26A1O43174 497 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 NEFMP07197 916 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 CYP27A1Q02318 531 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 RASIP1Q5U651 963 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 ALG1LQ6GMV1 187 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 MPRIPQ6WCQ1 1025 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 VSIG10LQ86VR7 867 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 PPM1HQ9ULR3 514 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 AKAP2Q9Y2D5 859 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 DAGLAQ9Y4D2 1042 aa5.96□□□□□ -1.46
PSPC1-205ENST00000497722 GIPC1O14908 333 aa5.95□□□□□ -1.46
PSPC1-205ENST00000497722 PAGE1O75459 146 aa5.95□□□□□ -1.46
PSPC1-205ENST00000497722 P4HBP07237 508 aaKnown RBP5.95□□□□□ -1.46
PSPC1-205ENST00000497722 GSTT1P30711 240 aa5.95□□□□□ -1.46
PSPC1-205ENST00000497722 NTF4P34130 210 aa5.95□□□□□ -1.46
PSPC1-205ENST00000497722 MAPK8P45983 427 aa5.95□□□□□ -1.46
PSPC1-205ENST00000497722 RING1Q06587 406 aa5.95□□□□□ -1.46
PSPC1-205ENST00000497722 TTLL4Q14679 1199 aa5.95□□□□□ -1.46
PSPC1-205ENST00000497722 DUSP27Q5VZP5 1158 aa5.95□□□□□ -1.46
PSPC1-205ENST00000497722 BSDC1Q9NW68 430 aaPredicted RBP5.95□□□□□ -1.46
PSPC1-205ENST00000497722 ERVK-24P63145 666 aa5.94□□□□□ -1.46
PSPC1-205ENST00000497722 PKN1Q16512 942 aa5.94□□□□□ -1.46
PSPC1-205ENST00000497722 ZNF648Q5T619 568 aaPredicted RBP5.94□□□□□ -1.46
PSPC1-205ENST00000497722 TP53INP2Q8IXH6 220 aa5.94□□□□□ -1.46
PSPC1-205ENST00000497722 SMYD4Q8IYR2 804 aaPredicted RBP5.94□□□□□ -1.46
PSPC1-205ENST00000497722 GRIN3AQ8TCU5 1115 aa5.94□□□□□ -1.46
PSPC1-205ENST00000497722 GPBAR1Q8TDU6 330 aa5.94□□□□□ -1.46
PSPC1-205ENST00000497722 KCNB2Q92953 911 aa5.94□□□□□ -1.46
PSPC1-205ENST00000497722 EMILIN2Q9BXX0 1053 aa5.94□□□□□ -1.46
PSPC1-205ENST00000497722 LGR6Q9HBX8 967 aa5.94□□□□□ -1.46
PSPC1-205ENST00000497722 U3KQE9 123 aa5.94□□□□□ -1.46
PSPC1-205ENST00000497722 KRTAP9-7A8MTY7 169 aa5.93□□□□□ -1.46
PSPC1-205ENST00000497722 CDK5R2Q13319 367 aa5.93□□□□□ -1.46
PSPC1-205ENST00000497722 MAP1SQ66K74 1059 aaPredicted RBP5.93□□□□□ -1.46
PSPC1-205ENST00000497722 TPTE2Q6XPS3 522 aa5.93□□□□□ -1.46
PSPC1-205ENST00000497722 AEBP1Q8IUX7 1158 aa5.93□□□□□ -1.46
PSPC1-205ENST00000497722 RNF214Q8ND24 703 aa5.93□□□□□ -1.46
PSPC1-205ENST00000497722 ISL2Q96A47 359 aa5.93□□□□□ -1.46
PSPC1-205ENST00000497722 C12orf49Q9H741 205 aa5.93□□□□□ -1.46
PSPC1-205ENST00000497722 HCLS1P14317 486 aaPredicted RBP5.92□□□□□ -1.46
PSPC1-205ENST00000497722 ZNF124Q15973 351 aa5.92□□□□□ -1.46
PSPC1-205ENST00000497722 SCARA3Q6AZY7 606 aa5.92□□□□□ -1.46
PSPC1-205ENST00000497722 FAM214BQ7L5A3 538 aa5.92□□□□□ -1.46
PSPC1-205ENST00000497722 AGBL5Q8NDL9 886 aa5.92□□□□□ -1.46
PSPC1-205ENST00000497722 CEP44Q9C0F1 390 aa5.92□□□□□ -1.46
PSPC1-205ENST00000497722 PIDD1Q9HB75 910 aa5.92□□□□□ -1.46
PSPC1-205ENST00000497722 PAK6Q9NQU5 681 aaPredicted RBP5.92□□□□□ -1.46
PSPC1-205ENST00000497722 PCOLCE2Q9UKZ9 415 aa5.92□□□□□ -1.46
PSPC1-205ENST00000497722 FBXO24O75426 580 aa5.91□□□□□ -1.46
PSPC1-205ENST00000497722 LEFTY1O75610 366 aa5.91□□□□□ -1.46
PSPC1-205ENST00000497722 TRIM37O94972 964 aa5.91□□□□□ -1.46
PSPC1-205ENST00000497722 FAM87AP0C7U9 286 aa5.91□□□□□ -1.46
PSPC1-205ENST00000497722 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
PSPC1-205ENST00000497722 BCL7CQ8WUZ0 217 aaPredicted RBP5.91□□□□□ -1.46
PSPC1-205ENST00000497722 DUSP23Q9BVJ7 150 aa5.91□□□□□ -1.46
PSPC1-205ENST00000497722 LRRC4CQ9HCJ2 640 aa5.91□□□□□ -1.46
PSPC1-205ENST00000497722 FAM8A1Q9UBU6 413 aa5.91□□□□□ -1.46
PSPC1-205ENST00000497722 CELA3AP09093 270 aa5.9□□□□□ -1.46
PSPC1-205ENST00000497722 HNRNPUQ00839 825 aaKnown RBP eCLIP5.9□□□□□ -1.46
PSPC1-205ENST00000497722 CYP27C1Q4G0S4 372 aa5.9□□□□□ -1.46
PSPC1-205ENST00000497722 UBE3DQ7Z6J8 389 aa5.9□□□□□ -1.46
PSPC1-205ENST00000497722 FRMD6Q96NE9 622 aa5.9□□□□□ -1.46
PSPC1-205ENST00000497722 SPG7Q9UQ90 795 aa5.9□□□□□ -1.46
PSPC1-205ENST00000497722 PATL2C9JE40 543 aaKnown RBP5.89□□□□□ -1.47
PSPC1-205ENST00000497722 LDHBP07195 334 aaKnown RBP5.89□□□□□ -1.47
PSPC1-205ENST00000497722 USP17L7P0C7H9 530 aa5.89□□□□□ -1.47
PSPC1-205ENST00000497722 SPRED2Q7Z698 418 aa5.89□□□□□ -1.47
PSPC1-205ENST00000497722 MKNK2Q9HBH9 465 aa5.89□□□□□ -1.47
PSPC1-205ENST00000497722 RNF19AQ9NV58 838 aa5.89□□□□□ -1.47
PSPC1-205ENST00000497722 CYP8B1Q9UNU6 501 aa5.89□□□□□ -1.47
PSPC1-205ENST00000497722 RNGTTO60942 597 aaKnown RBP5.88□□□□□ -1.47
PSPC1-205ENST00000497722 FARP2O94887 1054 aaPredicted RBP5.88□□□□□ -1.47
PSPC1-205ENST00000497722 GNA15P30679 374 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 OXCT1P55809 520 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 ATP2B2Q01814 1243 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 PTPN11Q06124 597 aaPredicted RBP5.88□□□□□ -1.47
PSPC1-205ENST00000497722 PPM1JQ5JR12 505 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 ZBTB37Q5TC79 503 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 PCNX4Q63HM2 1172 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 LLGL2Q6P1M3 1020 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 SV2BQ7L1I2 683 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 PLD6Q8N2A8 252 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms