RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 HCN2Q9UL51 889 aa10.53□□□□□ -0.72
VPS45-210ENST00000497638 FOXN1O15353 648 aa10.52□□□□□ -0.73
VPS45-210ENST00000497638 CTCFP49711 727 aaPredicted RBP10.52□□□□□ -0.73
VPS45-210ENST00000497638 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
VPS45-210ENST00000497638 KLF15Q9UIH9 416 aa10.52□□□□□ -0.73
VPS45-210ENST00000497638 POLRMTO00411 1230 aaKnown RBP10.51□□□□□ -0.73
VPS45-210ENST00000497638 ADAM23O75077 832 aa10.51□□□□□ -0.73
VPS45-210ENST00000497638 HSP90AB1P08238 724 aaKnown RBP10.51□□□□□ -0.73
VPS45-210ENST00000497638 DGKGP49619 791 aa10.51□□□□□ -0.73
VPS45-210ENST00000497638 ATP1A2P50993 1020 aa10.51□□□□□ -0.73
VPS45-210ENST00000497638 HDGFL1Q5TGJ6 251 aa10.51□□□□□ -0.73
VPS45-210ENST00000497638 LRRC69Q6ZNQ3 347 aa10.51□□□□□ -0.73
VPS45-210ENST00000497638 FCHSD1Q86WN1 690 aa10.51□□□□□ -0.73
VPS45-210ENST00000497638 TPCN2Q8NHX9 752 aa10.51□□□□□ -0.73
VPS45-210ENST00000497638 NOP53Q9NZM5 478 aaKnown RBP10.51□□□□□ -0.73
VPS45-210ENST00000497638 SRP68Q9UHB9 627 aaKnown RBP10.51□□□□□ -0.73
VPS45-210ENST00000497638 MKRN1Q9UHC7 482 aaKnown RBP10.51□□□□□ -0.73
VPS45-210ENST00000497638 DLEC1Q9Y238 1755 aa10.51□□□□□ -0.73
VPS45-210ENST00000497638 CNTNAP1P78357 1384 aa10.51□□□□□ -0.73
VPS45-210ENST00000497638 SERTM1A2A2V5 107 aa10.5□□□□□ -0.73
VPS45-210ENST00000497638 CRKLP46109 303 aaKnown RBP10.5□□□□□ -0.73
VPS45-210ENST00000497638 LAMC2Q13753 1193 aa10.5□□□□□ -0.73
VPS45-210ENST00000497638 ZNF468Q5VIY5 522 aaPredicted RBP10.5□□□□□ -0.73
VPS45-210ENST00000497638 WASHC2AQ641Q2 1341 aa10.5□□□□□ -0.73
VPS45-210ENST00000497638 CCDC88AQ3V6T2 1871 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 ST20-MTHFSA0A0A6YYL1 179 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 USP17L3A6NCW0 530 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 USP17L4A6NCW7 530 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 TM4SF1P30408 202 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 EPHA4P54764 986 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 CCDC102BQ68D86 513 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 USP17L2Q6R6M4 530 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 USP17L1Q7RTZ2 530 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 TTLL6Q8N841 843 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
VPS45-210ENST00000497638 NRXN2Q9P2S2 1712 aa10.48□□□□□ -0.73
VPS45-210ENST00000497638 NFKBIEO00221 500 aa10.48□□□□□ -0.73
VPS45-210ENST00000497638 EML1O00423 815 aa10.48□□□□□ -0.73
VPS45-210ENST00000497638 PPM1GO15355 546 aaPredicted RBP10.48□□□□□ -0.73
VPS45-210ENST00000497638 PLEKHM2Q8IWE5 1019 aa10.48□□□□□ -0.73
VPS45-210ENST00000497638 ADAMTS19Q8TE59 1207 aa10.48□□□□□ -0.73
VPS45-210ENST00000497638 DICER1Q9UPY3 1922 aaKnown RBP10.48□□□□□ -0.73
VPS45-210ENST00000497638 ADAMTS7Q9UKP4 1686 aa10.47□□□□□ -0.73
VPS45-210ENST00000497638 AFDNP55196 1824 aaKnown RBP10.47□□□□□ -0.73
VPS45-210ENST00000497638 ZBTB7BO15156 539 aaPredicted RBP10.47□□□□□ -0.73
VPS45-210ENST00000497638 EFSO43281 561 aa10.47□□□□□ -0.73
VPS45-210ENST00000497638 ALAS2P22557 587 aa10.47□□□□□ -0.73
VPS45-210ENST00000497638 CABP4P57796 275 aa10.47□□□□□ -0.73
VPS45-210ENST00000497638 RHPN1Q8TCX5 695 aa10.47□□□□□ -0.73
VPS45-210ENST00000497638 ABHD8Q96I13 439 aa10.47□□□□□ -0.73
VPS45-210ENST00000497638 KIAA1024Q9UPX6 916 aa10.47□□□□□ -0.73
VPS45-210ENST00000497638 RBM19Q9Y4C8 960 aaKnown RBP10.47□□□□□ -0.73
VPS45-210ENST00000497638 TJP1Q07157 1748 aa10.47□□□□□ -0.73
VPS45-210ENST00000497638 ATP9BO43861 1147 aa10.46□□□□□ -0.73
VPS45-210ENST00000497638 PTCD1O75127 700 aaKnown RBP10.46□□□□□ -0.73
VPS45-210ENST00000497638 CLDN10P78369 228 aa10.46□□□□□ -0.73
VPS45-210ENST00000497638 SH3PXD2AQ5TCZ1 1133 aa10.46□□□□□ -0.73
VPS45-210ENST00000497638 SYT9Q86SS6 491 aa10.46□□□□□ -0.73
VPS45-210ENST00000497638 VIRMAQ69YN4 1812 aaKnown RBP10.45□□□□□ -0.74
VPS45-210ENST00000497638 PASKQ96RG2 1323 aa10.45□□□□□ -0.74
VPS45-210ENST00000497638 K7ELQ4 463 aaPredicted RBP10.45□□□□□ -0.74
VPS45-210ENST00000497638 LBX1P52954 281 aa10.45□□□□□ -0.74
VPS45-210ENST00000497638 MLLT1Q03111 559 aaPredicted RBP10.45□□□□□ -0.74
VPS45-210ENST00000497638 CDCA8Q53HL2 280 aa10.45□□□□□ -0.74
VPS45-210ENST00000497638 C2CD5Q86YS7 1000 aa10.45□□□□□ -0.74
VPS45-210ENST00000497638 OGFOD1Q8N543 542 aa10.45□□□□□ -0.74
VPS45-210ENST00000497638 TSPAN10Q9H1Z9 355 aaPredicted RBP10.45□□□□□ -0.74
VPS45-210ENST00000497638 HCN4Q9Y3Q4 1203 aa10.45□□□□□ -0.74
VPS45-210ENST00000497638 GPC6Q9Y625 555 aaPredicted RBP10.45□□□□□ -0.74
VPS45-210ENST00000497638 SOS1Q07889 1333 aaPredicted RBP10.44□□□□□ -0.74
VPS45-210ENST00000497638 LTBP3Q9NS15 1303 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 ELOA3CA0A087WX78 387 aaPredicted RBP10.44□□□□□ -0.74
VPS45-210ENST00000497638 IQCA1LA6NCM1 817 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 ELOA3DA6NLF2 546 aaPredicted RBP10.44□□□□□ -0.74
VPS45-210ENST00000497638 C1QTNF9BB2RNN3 333 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 H0YIN7 160 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 PSMA6P60900 246 aaKnown RBP10.44□□□□□ -0.74
VPS45-210ENST00000497638 NFIXQ14938 502 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 ELOA3BQ3SY89 546 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 AMOTQ4VCS5 1084 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 PLEKHO1Q53GL0 409 aaPredicted RBP10.44□□□□□ -0.74
VPS45-210ENST00000497638 USPL1Q5W0Q7 1092 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 ZNF530Q6P9A1 599 aaPredicted RBP10.44□□□□□ -0.74
VPS45-210ENST00000497638 INTS5Q6P9B9 1019 aaKnown RBP10.44□□□□□ -0.74
VPS45-210ENST00000497638 LDHDQ86WU2 507 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 LARGE2Q8N3Y3 721 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 ELOA3Q8NG57 546 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 UCN2Q96RP3 112 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 FER1L6Q2WGJ9 1857 aa10.44□□□□□ -0.74
VPS45-210ENST00000497638 SCN4AP35499 1836 aa10.43□□□□□ -0.74
VPS45-210ENST00000497638 PDE4DIPQ5VU43 2346 aa10.43□□□□□ -0.74
VPS45-210ENST00000497638 PALM3A6NDB9 673 aaPredicted RBP10.43□□□□□ -0.74
VPS45-210ENST00000497638 TMEM88BA6NKF7 163 aa10.43□□□□□ -0.74
VPS45-210ENST00000497638 SERPINB2P05120 415 aa10.43□□□□□ -0.74
VPS45-210ENST00000497638 FURINP09958 794 aa10.43□□□□□ -0.74
VPS45-210ENST00000497638 HSPA8P11142 646 aaKnown RBP10.43□□□□□ -0.74
VPS45-210ENST00000497638 SFSWAPQ12872 951 aaKnown RBP10.43□□□□□ -0.74
VPS45-210ENST00000497638 EIF4A2Q14240 407 aaKnown RBP10.43□□□□□ -0.74
VPS45-210ENST00000497638 NARFQ9UHQ1 456 aa10.43□□□□□ -0.74
VPS45-210ENST00000497638 COL15A1P39059 1388 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms