RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	GRM8	O00222	908 aa		12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	IPO7	O95373	1038 aa	Known RBP	12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	CDC27	P30260	824 aa		12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	NAA25	Q14CX7	972 aa		12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	CPLX2	Q6PUV4	134 aa	Known RBP	12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ILDR1	Q86SU0	546 aa	Predicted RBP	12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	PRPF38A	Q8NAV1	312 aa	Known RBP	12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	RASSF8	Q8NHQ8	419 aa		12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	N4BP2L2	Q92802	583 aa	Predicted RBP	12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	UBXN6	Q9BZV1	441 aa		12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	PRC1	O43663	620 aa		12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	PIP4K2B	P78356	416 aa		12.05	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	FMR1	Q06787	632 aa	Known RBP eCLIP	12.05	□□□□□ -0.48	2e-31	■■■■■ 109.2
TRAPPC12-223	ENST00000497597	MACROD2	A1Z1Q3	448 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	MAP2K7	O14733	419 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ANKRD18A	Q8IVF6	992 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	KIFC2	Q96AC6	838 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	SERTAD1	Q9UHV2	236 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ADAMTSL3	P82987	1691 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	IKBKB	O14920	756 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	PEX19	P40855	299 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	UBE3B	Q7Z3V4	1068 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	LLPH	Q9BRT6	129 aa	Known RBP	12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	CAPS2	Q9BXY5	557 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	DBNL	Q9UJU6	430 aa	Known RBP	12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	MYO6	Q9UM54	1294 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ADGRG1	Q9Y653	693 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	CAMSAP1	Q5T5Y3	1602 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	AGL	P35573	1532 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ATP7A	Q04656	1500 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597		A0A1W2PQ27	194 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597		A0A1W2PQ64	194 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597		A0A1W2PQD8	194 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	CMA1	P23946	247 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	VPS37D	Q86XT2	251 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	MED4	Q9NPJ6	270 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	INTS13	Q9NVM9	706 aa		12.04	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ATP7B	P35670	1465 aa		12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	CD163L1	Q9NR16	1453 aa		12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ZPR1	O75312	459 aa		12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	HMGB1	P09429	215 aa	Known RBP	12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	GNL3L	Q9NVN8	582 aa	Known RBP	12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	BCCIP	Q9P287	314 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	YEATS4	O95619	227 aa		12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	HPD	P32754	393 aa	Predicted RBP	12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	TTC39A	Q5SRH9	613 aa		12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	SMARCC2	Q8TAQ2	1214 aa		12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	AIDA	Q96BJ3	306 aa		12.03	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ADGRB1	O14514	1584 aa		12.02	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	DDX58	O95786	925 aa	Known RBP	12.02	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	CLNS1A	P54105	237 aa	Known RBP	12.02	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	SLC7A5	Q01650	507 aa		12.02	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	SH2D3C	Q8N5H7	860 aa		12.02	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	IL17RA	Q96F46	866 aa		12.02	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	PLCD4	Q9BRC7	762 aa		12.02	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	SLC26A6	Q9BXS9	759 aa		12.02	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	TAB2	Q9NYJ8	693 aa		12.02	□□□□□ -0.48
TRAPPC12-223	ENST00000497597	ALDH1L1	O75891	902 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	FDPS	P14324	419 aa	Known RBP	12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	KRT9	P35527	623 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	CCDC122	Q5T0U0	273 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	LRCH2	Q5VUJ6	765 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	FCHSD1	Q86WN1	690 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	CCDC114	Q96M63	670 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	C19orf44	Q9H6X5	657 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	MROH2A	A6NES4	1674 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	CRB1	P82279	1406 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	BACH1	O14867	736 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	GBP2	P32456	591 aa	Predicted RBP	12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	MMP14	P50281	582 aa		12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	RNASE9	P60153	205 aa	Known RBP	12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	SAFB	Q15424	915 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	DBF4	Q9UBU7	674 aa	Predicted RBP	12.02	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	YEATS2	Q9ULM3	1422 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	DEPDC5	O75140	1603 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	SKAP2	O75563	359 aa	Predicted RBP	12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	KCNJ6	P48051	423 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	C2orf54	Q08AI8	447 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	IFT88	Q13099	833 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	CCDC181	Q5TID7	509 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	SHC4	Q6S5L8	630 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	METTL16	Q86W50	562 aa	Known RBP	12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	CMTR1	Q8N1G2	835 aa	Known RBP	12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	DACH1	Q9UI36	760 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	TET3	O43151	1660 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	SLC39A6	Q13433	755 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	KCTD19	Q17RG1	926 aa	Predicted RBP	12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	SLC9C2	Q5TAH2	1124 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	KRT40	Q6A162	431 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	IQUB	Q8NA54	791 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	NUP133	Q8WUM0	1156 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	KCNJ14	Q9UNX9	436 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	VWDE	Q8N2E2	1590 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	GOLGA6L7	A0A1B0GV03	622 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	EIF4E1B	A6NMX2	242 aa	Known RBP	12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	UBE2Q2L	H0YL09	131 aa		12.01	□□□□□ -0.49
TRAPPC12-223	ENST00000497597	IFIT1	P09914	478 aa	Known RBP	12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms