RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SNX21Q969T3 373 aa16.92■□□□□ 0.3
VPS26A-209ENST00000497564 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
VPS26A-209ENST00000497564 ZNF408Q9H9D4 720 aa16.92■□□□□ 0.3
VPS26A-209ENST00000497564 CTNNA3Q9UI47 895 aa16.92■□□□□ 0.3
VPS26A-209ENST00000497564 ABT1Q9ULW3 272 aaKnown RBP16.92■□□□□ 0.3
VPS26A-209ENST00000497564 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
VPS26A-209ENST00000497564 PATL2C9JE40 543 aaKnown RBP16.91■□□□□ 0.3
VPS26A-209ENST00000497564 ZKSCAN1P17029 563 aaPredicted RBP16.91■□□□□ 0.3
VPS26A-209ENST00000497564 VEGFBP49765 207 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 CERS3Q8IU89 383 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 SLF2Q8IX21 1173 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 RASEFQ8IZ41 740 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 LCORLQ8N3X6 602 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 IPO9Q96P70 1041 aaKnown RBP16.91■□□□□ 0.3
VPS26A-209ENST00000497564 TM6SF1Q9BZW5 370 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 ARMT1Q9H993 441 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 MROH7-TTC4A0A0A0MT08 1334 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 GAKO14976 1311 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
VPS26A-209ENST00000497564 RASSF10A6NK89 507 aa16.9■□□□□ 0.3
VPS26A-209ENST00000497564 F8W031 263 aaPredicted RBP16.9■□□□□ 0.3
VPS26A-209ENST00000497564 PPP4CP60510 307 aa16.9■□□□□ 0.3
VPS26A-209ENST00000497564 MIGA1Q8NAN2 632 aa16.9■□□□□ 0.3
VPS26A-209ENST00000497564 DCPSQ96C86 337 aaKnown RBP16.9■□□□□ 0.3
VPS26A-209ENST00000497564 WNT10BO00744 389 aa16.89■□□□□ 0.29
VPS26A-209ENST00000497564 FGAP02671 866 aa16.89■□□□□ 0.29
VPS26A-209ENST00000497564 KRT32Q14532 448 aa16.89■□□□□ 0.29
VPS26A-209ENST00000497564 OGFOD1Q8N543 542 aa16.89■□□□□ 0.29
VPS26A-209ENST00000497564 ZBED3Q96IU2 234 aaPredicted RBP16.89■□□□□ 0.29
VPS26A-209ENST00000497564 MRIQ9BWK5 157 aa16.89■□□□□ 0.29
VPS26A-209ENST00000497564 MYH8P13535 1937 aa16.88■□□□□ 0.29
VPS26A-209ENST00000497564 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
VPS26A-209ENST00000497564 CYP21A2P08686 494 aa16.88■□□□□ 0.29
VPS26A-209ENST00000497564 BECN1Q14457 450 aa16.88■□□□□ 0.29
VPS26A-209ENST00000497564 DEFB115Q30KQ5 88 aa16.88■□□□□ 0.29
VPS26A-209ENST00000497564 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
VPS26A-209ENST00000497564 TLL2Q9Y6L7 1015 aa16.88■□□□□ 0.29
VPS26A-209ENST00000497564 GPR75-ASB3A0A0A6YYF3 556 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 BAG3O95817 575 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 PSMA5P28066 241 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 DYNLL1P63167 89 aaKnown RBP16.87■□□□□ 0.29
VPS26A-209ENST00000497564 HDLBPQ00341 1268 aaKnown RBP16.87■□□□□ 0.29
VPS26A-209ENST00000497564 DIXDC1Q155Q3 683 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 PRAMEF18Q5VWM3 479 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 SAPCD2Q86UD0 394 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 SULF1Q8IWU6 871 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 CRNKL1Q9BZJ0 848 aaKnown RBP16.87■□□□□ 0.29
VPS26A-209ENST00000497564 NACAP1Q9BZK3 213 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
VPS26A-209ENST00000497564 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
VPS26A-209ENST00000497564 ST18O60284 1047 aa16.86■□□□□ 0.29
VPS26A-209ENST00000497564 GRM1Q13255 1194 aa16.86■□□□□ 0.29
VPS26A-209ENST00000497564 IMMTQ16891 758 aaKnown RBP16.86■□□□□ 0.29
VPS26A-209ENST00000497564 IFFO2Q5TF58 517 aa16.86■□□□□ 0.29
VPS26A-209ENST00000497564 CYP4F22Q6NT55 531 aa16.86■□□□□ 0.29
VPS26A-209ENST00000497564 HHIPL2Q6UWX4 724 aa16.86■□□□□ 0.29
VPS26A-209ENST00000497564 CDCA5Q96FF9 252 aa16.86■□□□□ 0.29
VPS26A-209ENST00000497564 NOL10Q9BSC4 688 aaKnown RBP16.86■□□□□ 0.29
VPS26A-209ENST00000497564 ZSWIM6Q9HCJ5 1215 aa16.86■□□□□ 0.29
VPS26A-209ENST00000497564 AATFQ9NY61 560 aaKnown RBP eCLIP16.86■□□□□ 0.29
VPS26A-209ENST00000497564 TTF2Q9UNY4 1162 aaKnown RBP16.86■□□□□ 0.29
VPS26A-209ENST00000497564 PRKAB2O43741 272 aa16.85■□□□□ 0.29
VPS26A-209ENST00000497564 APPP05067 770 aa16.85■□□□□ 0.29
VPS26A-209ENST00000497564 PLCG2P16885 1265 aa16.85■□□□□ 0.29
VPS26A-209ENST00000497564 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
VPS26A-209ENST00000497564 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
VPS26A-209ENST00000497564 JAKMIP1Q96N16 626 aaKnown RBP16.85■□□□□ 0.29
VPS26A-209ENST00000497564 TBC1D2Q9BYX2 928 aa16.85■□□□□ 0.29
VPS26A-209ENST00000497564 NAPBQ9H115 298 aa16.85■□□□□ 0.29
VPS26A-209ENST00000497564 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
VPS26A-209ENST00000497564 HDAC9Q9UKV0 1011 aa16.85■□□□□ 0.29
VPS26A-209ENST00000497564 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
VPS26A-209ENST00000497564 ZNF213O14771 459 aa16.84■□□□□ 0.29
VPS26A-209ENST00000497564 HSPA1AP0DMV8 641 aaKnown RBP16.84■□□□□ 0.29
VPS26A-209ENST00000497564 HSPA1BP0DMV9 641 aaKnown RBP16.84■□□□□ 0.29
VPS26A-209ENST00000497564 NEK4P51957 841 aa16.84■□□□□ 0.29
VPS26A-209ENST00000497564 CFAP100Q494V2 611 aa16.84■□□□□ 0.29
VPS26A-209ENST00000497564 CAPNS2Q96L46 248 aa16.84■□□□□ 0.29
VPS26A-209ENST00000497564 TTC14Q96N46 770 aa16.84■□□□□ 0.29
VPS26A-209ENST00000497564 DAGLAQ9Y4D2 1042 aa16.84■□□□□ 0.29
VPS26A-209ENST00000497564 PITPNM2Q9BZ72 1349 aa16.84■□□□□ 0.29
VPS26A-209ENST00000497564 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
VPS26A-209ENST00000497564 E7EWF7 191 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 HMGB1P09429 215 aaKnown RBP16.83■□□□□ 0.28
VPS26A-209ENST00000497564 CASTP20810 708 aaKnown RBP16.83■□□□□ 0.28
VPS26A-209ENST00000497564 BTDP43251 543 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 MCM2P49736 904 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 DLGAP5Q15398 846 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 STOX1Q6ZVD7 989 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 RUFY3Q7L099 469 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 HSCBQ8IWL3 235 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 SDR42E1Q8WUS8 393 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 TEKT1Q969V4 418 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
VPS26A-209ENST00000497564 ALDH8A1Q9H2A2 487 aaPredicted RBP16.83■□□□□ 0.28
VPS26A-209ENST00000497564 GBA2Q9HCG7 927 aaPredicted RBP16.83■□□□□ 0.28
VPS26A-209ENST00000497564 ANAPC4Q9UJX5 808 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.28
VPS26A-209ENST00000497564 CLRN2A0PK11 232 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms