RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SPAG9O60271 1321 aaKnown RBP3.42□□□□□ -1.86
CKS1BP2-201ENST00000497342 WASHC2CQ9Y4E1 1318 aa3.42□□□□□ -1.86
CKS1BP2-201ENST00000497342 VCANP13611 3396 aa3.42□□□□□ -1.86
CKS1BP2-201ENST00000497342 MARF1Q9Y4F3 1742 aaKnown RBP3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 ARHGAP5Q13017 1502 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 TMEM238LA0A1B0GVL6 79 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 FAM221AA4D161 298 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 EREGO14944 169 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 CDC45O75419 566 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 HSPA8P11142 646 aaKnown RBP3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 TIMP2P16035 220 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 NNTQ13423 1086 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 DDR2Q16832 855 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 C2orf27AQ580R0 203 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 GNASQ5JWF2 1037 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 LIAT1Q6ZQX7 453 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 C16orf86Q6ZW13 317 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 FILIP1Q7Z7B0 1213 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 NLRP8Q86W28 1048 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 HOMER1Q86YM7 354 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 CERS3Q8IU89 383 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 LILRB2Q8N423 598 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 C1orf127Q8N9H9 656 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 SH3TC2Q8TF17 1288 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 AIDAQ96BJ3 306 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 NLRP3Q96P20 1036 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 NECAB3Q96P71 396 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 SRPK1Q96SB4 655 aaKnown RBP3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 SRRTQ9BXP5 876 aaKnown RBP3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 CEP44Q9C0F1 390 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 BHLHE41Q9C0J9 482 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 NEUROD4Q9HD90 331 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 PRDM6Q9NQX0 595 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 DZANK1Q9NVP4 752 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 PPP4R2Q9NY27 417 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 CACNA2D2Q9NY47 1150 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 ZNRF3Q9ULT6 936 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 PARP3Q9Y6F1 533 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 TRANK1O15050 2925 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 MYO5CQ9NQX4 1742 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 USP32Q8NFA0 1604 aa3.41□□□□□ -1.86
CKS1BP2-201ENST00000497342 CHD2O14647 1828 aaKnown RBP3.4□□□□□ -1.86
CKS1BP2-201ENST00000497342 EFSO43281 561 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 ATE1O95260 518 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 MAP3K6O95382 1288 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 PDGFRBP09619 1106 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 IMPDH2P12268 514 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 TATP17735 454 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 POU3F3P20264 500 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 PLA2G5P39877 138 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 CRKP46108 304 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 MASP1P48740 699 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 LIG3P49916 1009 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 SQSTM1Q13501 440 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 LBRQ14739 615 aaKnown RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 ARID5BQ14865 1188 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 CCDC85BQ15834 202 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZC3H12BQ5HYM0 836 aaKnown RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 TMEM214Q6NUQ4 689 aaKnown RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 C16orf71Q8IYS4 520 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 ARHGEF28Q8N1W1 1705 aaKnown RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 TAB3Q8N5C8 712 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 ST13P5Q8NFI4 369 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 THAP3Q8WTV1 239 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 ITPKCQ96DU7 683 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 CNTNAP3BQ96NU0 1288 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 CNTNAP3Q9BZ76 1288 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 EHMT1Q9H9B1 1298 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 BAHCC1Q9P281 2608 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 CHPF2Q9P2E5 772 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 PLAAQ9Y263 795 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 LAMC1P11047 1609 aa3.4□□□□□ -1.87
CKS1BP2-201ENST00000497342 NEXMIFQ5QGS0 1516 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 EHBP1L1Q8N3D4 1523 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 LOC102724159A0A0B4J2E5 919 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 A0A1B0GTH6 734 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 CCDC194A0A1B0GVG4 234 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 MEIS3P2A8K0S8 358 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 NFKBIEO00221 500 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 ENC1O14682 589 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 PPP1R12AO14974 1030 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 PLSCR1O15162 318 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 PDPK1O15530 556 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 XYLBO75191 536 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 RFPL3O75679 317 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 GTF2E1P29083 439 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 PMLP29590 882 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 GBP2P32456 591 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 CAMK2GQ13555 558 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 LAMC2Q13753 1193 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 MPP2Q14168 576 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 PWP2Q15269 919 aaKnown RBP3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 SLC15A2Q16348 729 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 HSP90AB2PQ58FF8 381 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 LHX8Q68G74 356 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 CELF2-AS1Q8N7Q2 184 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 FAM169BQ8N8A8 192 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 HNRNPLLQ8WVV9 542 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms