RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PCNX4Q63HM2 1172 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 IGF2-ASQ6U949 168 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 MPRIPQ6WCQ1 1025 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 AGMOQ6ZNB7 445 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 UBXN4Q92575 508 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 LENG1Q96BZ8 264 aaPredicted RBP5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 DCAF5Q96JK2 942 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 RSRP1Q9BUV0 290 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 KCNQ5Q9NR82 932 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 PCDHGC5Q9Y5F6 944 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 FER1L4A9Z1Z3 1794 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 FAM181BA6NEQ2 426 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 F8W735 103 aaPredicted RBP5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 ZNF862O60290 1169 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 GSTP1P09211 210 aaKnown RBP5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 MAOBP27338 520 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 ARNTP27540 789 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 ZNF76P36508 570 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 CHRNA4P43681 627 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 RPS26P62854 115 aaKnown RBP5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 RACK1P63244 317 aaKnown RBP5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 AP3B2Q13367 1082 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 ADGRE1Q14246 886 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 NAALADL2Q58DX5 795 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 FAM117BQ6P1L5 589 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 ALYREFQ86V81 257 aaKnown RBP5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 ANKRD13AQ8IZ07 590 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 TMEM130Q8N3G9 435 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 TMPRSS13Q9BYE2 586 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 CCDC86Q9H6F5 360 aaKnown RBP5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 PPP1R1BQ9UD71 204 aaPredicted RBP5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 TLR6Q9Y2C9 796 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 UNC79Q9P2D8 2635 aa5.27□□□□□ -1.57
EXOSC3-208ENST00000496910 ASXL2Q76L83 1435 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 FAM177BA6PVY3 158 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 F6X3S4 739 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 CEBPAP49715 358 aaPredicted RBP5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 PTPN11Q06124 597 aaPredicted RBP5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 PPP2R3AQ06190 1150 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 MBTPS1Q14703 1052 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 POU4F3Q15319 338 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 PRRT3Q5FWE3 981 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 TTBK2Q6IQ55 1244 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 GIMAP6Q6P9H5 292 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 CERS3Q8IU89 383 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 WDR89Q96FK6 387 aaPredicted RBP5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 KBTBD4Q9NVX7 518 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 PCDHB5Q9Y5E4 795 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 PKD1L2Q7Z442 2459 aa5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 TDRD9Q8NDG6 1382 aaKnown RBP5.26□□□□□ -1.57
EXOSC3-208ENST00000496910 CPS1P31327 1500 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 TOPBP1Q92547 1522 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 MEGF11A6BM72 1044 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 ANKRD62A6NC57 917 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 TIAF1O95411 115 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 CYP11A1P05108 521 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 NCLP19338 710 aaKnown RBP5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 NOS3P29474 1203 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 ARL4DP49703 201 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 RASSF7Q02833 373 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 MAP3K11Q16584 847 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 ZNF394Q53GI3 561 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 C9orf131Q5VYM1 1079 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 CD163Q86VB7 1156 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 AGGF1Q8N302 714 aaeCLIP5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 RNF34Q969K3 372 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 SNX27Q96L92 541 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 TMEM74Q96NL1 305 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 WDR18Q9BV38 432 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 SSBP4Q9BWG4 385 aaPredicted RBP5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 MRPL18Q9H0U6 180 aaKnown RBP5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 KRT82Q9NSB4 513 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 ADAMTS1Q9UHI8 967 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 DDX41Q9UJV9 622 aaKnown RBP5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 SHANK2Q9UPX8 1470 aa5.25□□□□□ -1.57
EXOSC3-208ENST00000496910 RNF225M0QZC1 329 aaPredicted RBP5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 ALX3O95076 343 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 DUOXA2Q1HG44 320 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 KIF4BQ2VIQ3 1234 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 SCARA3Q6AZY7 606 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 ZNF662Q6ZS27 426 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 ACAD11Q709F0 780 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 HS2ST1Q7LGA3 356 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 NT5DC4Q86YG4 428 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 FAM9AQ8IZU1 332 aaPredicted RBP5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 DCAF11Q8TEB1 546 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 HIRIP3Q9BW71 556 aaPredicted RBP5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 USP26Q9BXU7 913 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 SUGCTQ9HAC7 445 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 GGT7Q9UJ14 662 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 CYP8B1Q9UNU6 501 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 PCDHGB7Q9Y5F8 929 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 CUL9Q8IWT3 2517 aa5.24□□□□□ -1.57
EXOSC3-208ENST00000496910 SYNGAP1Q96PV0 1343 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 PRG4Q92954 1404 aaPredicted RBP5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 FAM221AA4D161 298 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 C1QTNF9BB2RNN3 333 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 EIF4EBP3O60516 100 aaPredicted RBP5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 GREM1O60565 184 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 TRIM37O94972 964 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms