RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 CDAN1Q8IWY9 1227 aa23.3■■□□□ 1.32
CTDSP1-213ENST00000496785 SH3RF3Q8TEJ3 882 aaPredicted RBP23.3■■□□□ 1.32
CTDSP1-213ENST00000496785 AIDAQ96BJ3 306 aa23.3■■□□□ 1.32
CTDSP1-213ENST00000496785 CSRNP1Q96S65 589 aa23.3■■□□□ 1.32
CTDSP1-213ENST00000496785 CSADQ9Y600 493 aa23.3■■□□□ 1.32
CTDSP1-213ENST00000496785 AOC2O75106 756 aa23.29■■□□□ 1.32
CTDSP1-213ENST00000496785 MAP3K9P80192 1104 aa23.29■■□□□ 1.32
CTDSP1-213ENST00000496785 OSBPL5Q9H0X9 879 aaPredicted RBP23.29■■□□□ 1.32
CTDSP1-213ENST00000496785 DDX4Q9NQI0 724 aaKnown RBP23.29■■□□□ 1.32
CTDSP1-213ENST00000496785 ATRNL1Q5VV63 1379 aa23.28■■□□□ 1.32
CTDSP1-213ENST00000496785 AK9Q5TCS8 1911 aa23.28■■□□□ 1.32
CTDSP1-213ENST00000496785 IGHDP01880 384 aa23.28■■□□□ 1.32
CTDSP1-213ENST00000496785 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.28■■□□□ 1.32
CTDSP1-213ENST00000496785 EDC3Q96F86 508 aaKnown RBP23.28■■□□□ 1.32
CTDSP1-213ENST00000496785 DHX36Q9H2U1 1008 aaKnown RBP23.28■■□□□ 1.32
CTDSP1-213ENST00000496785 FZD1Q9UP38 647 aa23.28■■□□□ 1.32
CTDSP1-213ENST00000496785 ZNF532Q9HCE3 1301 aa23.28■■□□□ 1.32
CTDSP1-213ENST00000496785 MAGEB6P1A0A0J9YX57 407 aa23.27■■□□□ 1.32
CTDSP1-213ENST00000496785 HSPA1AP0DMV8 641 aaKnown RBP23.27■■□□□ 1.32
CTDSP1-213ENST00000496785 HSPA1BP0DMV9 641 aaKnown RBP23.27■■□□□ 1.32
CTDSP1-213ENST00000496785 ZBTB48P10074 688 aaPredicted RBP23.27■■□□□ 1.32
CTDSP1-213ENST00000496785 ADD2P35612 726 aa23.27■■□□□ 1.32
CTDSP1-213ENST00000496785 MIGA1Q8NAN2 632 aa23.27■■□□□ 1.32
CTDSP1-213ENST00000496785 WRNIP1Q96S55 665 aa23.27■■□□□ 1.32
CTDSP1-213ENST00000496785 WBP1LQ9NX94 342 aa23.27■■□□□ 1.32
CTDSP1-213ENST00000496785 CA12O43570 354 aa23.26■■□□□ 1.31
CTDSP1-213ENST00000496785 UBE3CQ15386 1083 aa23.26■■□□□ 1.31
CTDSP1-213ENST00000496785 TSHZ3Q63HK5 1081 aa23.26■■□□□ 1.31
CTDSP1-213ENST00000496785 ZFPM1Q8IX07 1006 aa23.26■■□□□ 1.31
CTDSP1-213ENST00000496785 KBTBD3Q8NAB2 608 aa23.26■■□□□ 1.31
CTDSP1-213ENST00000496785 TGFBRAP1Q8WUH2 860 aa23.26■■□□□ 1.31
CTDSP1-213ENST00000496785 SALL3Q9BXA9 1300 aa23.26■■□□□ 1.31
CTDSP1-213ENST00000496785 ZFYP08048 801 aaPredicted RBP23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 USP5P45974 858 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 DYNLL1P63167 89 aaKnown RBP23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 KIF23Q02241 960 aaPredicted RBP23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 NUCB1Q02818 461 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 SPRYD7Q5W111 196 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 B4GALNT3Q6L9W6 998 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 MIGA2Q7L4E1 593 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 CHD1LQ86WJ1 897 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 PI4K2BQ8TCG2 481 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 CRNKL1Q9BZJ0 848 aaKnown RBP23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 LNPKQ9C0E8 428 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 STAP2Q9UGK3 403 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 FLT1P17948 1338 aa23.25■■□□□ 1.31
CTDSP1-213ENST00000496785 TCRBV5S4A2TA0A5A2 114 aa23.24■■□□□ 1.31
CTDSP1-213ENST00000496785 DDTLA6NHG4 134 aaPredicted RBP23.24■■□□□ 1.31
CTDSP1-213ENST00000496785 SREBF2Q12772 1141 aa23.24■■□□□ 1.31
CTDSP1-213ENST00000496785 OTUD7AQ8TE49 926 aaPredicted RBP23.24■■□□□ 1.31
CTDSP1-213ENST00000496785 CLMNQ96JQ2 1002 aa23.24■■□□□ 1.31
CTDSP1-213ENST00000496785 TBC1D12O60347 775 aa23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 HLA-DOAP06340 250 aa23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 CENPBP07199 599 aaPredicted RBP23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 PDE1AP54750 535 aa23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 VGLL4Q14135 290 aa23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 SH3BP5LQ7L8J4 393 aa23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 MAPKAPK5Q8IW41 473 aa23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 WNK4Q96J92 1243 aa23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 RIOK1Q9BRS2 568 aaKnown RBP23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 ZNF112Q9UJU3 913 aa23.23■■□□□ 1.31
CTDSP1-213ENST00000496785 OTOFQ9HC10 1997 aa23.22■■□□□ 1.31
CTDSP1-213ENST00000496785 MANSC4A6NHS7 340 aaPredicted RBP23.22■■□□□ 1.31
CTDSP1-213ENST00000496785 INHBEP58166 350 aa23.22■■□□□ 1.31
CTDSP1-213ENST00000496785 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
CTDSP1-213ENST00000496785 ELP3Q9H9T3 547 aa23.22■■□□□ 1.31
CTDSP1-213ENST00000496785 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.22■■□□□ 1.31
CTDSP1-213ENST00000496785 PI4KBQ9UBF8 816 aa23.22■■□□□ 1.31
CTDSP1-213ENST00000496785 HERC5Q9UII4 1024 aaKnown RBP23.22■■□□□ 1.31
CTDSP1-213ENST00000496785 FOCADQ5VW36 1801 aa23.22■■□□□ 1.31
CTDSP1-213ENST00000496785 MYH7P12883 1935 aa23.21■■□□□ 1.31
CTDSP1-213ENST00000496785 OPTNQ96CV9 577 aa23.21■■□□□ 1.31
CTDSP1-213ENST00000496785 TRIM34Q9BYJ4 488 aa23.21■■□□□ 1.31
CTDSP1-213ENST00000496785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.21■■□□□ 1.31
CTDSP1-213ENST00000496785 NOL9Q5SY16 702 aaKnown RBP23.2■■□□□ 1.3
CTDSP1-213ENST00000496785 ERO1BQ86YB8 467 aa23.2■■□□□ 1.3
CTDSP1-213ENST00000496785 DDRGK1Q96HY6 314 aa23.2■■□□□ 1.3
CTDSP1-213ENST00000496785 FSD1Q9BTV5 496 aa23.2■■□□□ 1.3
CTDSP1-213ENST00000496785 SPDYE5A6NIY4 337 aa23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 NEFLP07196 543 aa23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 CTCFP49711 727 aaPredicted RBP23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 MKRN3Q13064 507 aaKnown RBP23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 TTC6Q86TZ1 520 aa23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 FOXP4Q8IVH2 680 aaPredicted RBP23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 APPBP2Q92624 585 aa23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 ZKSCAN4Q969J2 545 aaPredicted RBP23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 EVI5LQ96CN4 794 aa23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 ZIC5Q96T25 663 aa23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 SAGE1Q9NXZ1 904 aa23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 SNCAIPQ9Y6H5 919 aa23.19■■□□□ 1.3
CTDSP1-213ENST00000496785 CDK5RAP2Q96SN8 1893 aa23.18■■□□□ 1.3
CTDSP1-213ENST00000496785 RNF113AO15541 343 aaKnown RBP23.18■■□□□ 1.3
CTDSP1-213ENST00000496785 MBD4O95243 580 aa23.18■■□□□ 1.3
CTDSP1-213ENST00000496785 INPP5BP32019 993 aa23.18■■□□□ 1.3
CTDSP1-213ENST00000496785 TICAM2Q86XR7 235 aa23.18■■□□□ 1.3
CTDSP1-213ENST00000496785 CRACR2BQ8N4Y2 399 aaPredicted RBP23.18■■□□□ 1.3
CTDSP1-213ENST00000496785 CTNND1O60716 968 aaKnown RBP23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 TM4SF4P48230 202 aa23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 PPATQ06203 517 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms