RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 DCAF15Q66K64 600 aa13.37□□□□□ -0.27
ECM1-206ENST00000496744 ADGRA1Q86SQ6 560 aa13.37□□□□□ -0.27
ECM1-206ENST00000496744 AACSQ86V21 672 aa13.37□□□□□ -0.27
ECM1-206ENST00000496744 ZNF296Q8WUU4 475 aaPredicted RBP13.37□□□□□ -0.27
ECM1-206ENST00000496744 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
ECM1-206ENST00000496744 CHMP4BQ9H444 224 aaKnown RBP13.37□□□□□ -0.27
ECM1-206ENST00000496744 CSADQ9Y600 493 aa13.37□□□□□ -0.27
ECM1-206ENST00000496744 PHF20L1A8MW92 1017 aa13.36□□□□□ -0.27
ECM1-206ENST00000496744 GPR25O00155 361 aa13.36□□□□□ -0.27
ECM1-206ENST00000496744 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
ECM1-206ENST00000496744 ERO1BQ86YB8 467 aa13.36□□□□□ -0.27
ECM1-206ENST00000496744 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.36□□□□□ -0.27
ECM1-206ENST00000496744 BRI3BPQ8WY22 251 aa13.36□□□□□ -0.27
ECM1-206ENST00000496744 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
ECM1-206ENST00000496744 NDUFB9Q9Y6M9 179 aa13.36□□□□□ -0.27
ECM1-206ENST00000496744 IRF6O14896 467 aa13.35□□□□□ -0.27
ECM1-206ENST00000496744 HMMRO75330 724 aa13.35□□□□□ -0.27
ECM1-206ENST00000496744 MAP4K4O95819 1239 aaPredicted RBP13.35□□□□□ -0.27
ECM1-206ENST00000496744 PPP4CP60510 307 aa13.35□□□□□ -0.27
ECM1-206ENST00000496744 PICALMQ13492 652 aa13.35□□□□□ -0.27
ECM1-206ENST00000496744 DGKZQ13574 1117 aa13.35□□□□□ -0.27
ECM1-206ENST00000496744 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
ECM1-206ENST00000496744 ANTXR1Q9H6X2 564 aa13.35□□□□□ -0.27
ECM1-206ENST00000496744 APBB1O00213 710 aa13.34□□□□□ -0.27
ECM1-206ENST00000496744 IGSF3O75054 1194 aa13.34□□□□□ -0.27
ECM1-206ENST00000496744 RAB11FIP3O75154 756 aa13.34□□□□□ -0.27
ECM1-206ENST00000496744 GTF2A2P52657 109 aa13.34□□□□□ -0.27
ECM1-206ENST00000496744 PPATQ06203 517 aa13.34□□□□□ -0.27
ECM1-206ENST00000496744 NOL9Q5SY16 702 aaKnown RBP13.34□□□□□ -0.27
ECM1-206ENST00000496744 NAA16Q6N069 864 aaPredicted RBP13.34□□□□□ -0.27
ECM1-206ENST00000496744 SH3RF3Q8TEJ3 882 aaPredicted RBP13.34□□□□□ -0.27
ECM1-206ENST00000496744 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.27
ECM1-206ENST00000496744 CCL15-CCL14A0A0B4J2E2 113 aa13.33□□□□□ -0.28
ECM1-206ENST00000496744 CRHR2Q13324 411 aa13.33□□□□□ -0.28
ECM1-206ENST00000496744 PPIL2Q13356 520 aa13.33□□□□□ -0.28
ECM1-206ENST00000496744 CCL15Q16663 113 aa13.33□□□□□ -0.28
ECM1-206ENST00000496744 CTU1Q7Z7A3 348 aaKnown RBP13.33□□□□□ -0.28
ECM1-206ENST00000496744 ZSCAN29Q8IWY8 852 aaPredicted RBP13.33□□□□□ -0.28
ECM1-206ENST00000496744 CLASRPQ8N2M8 674 aaKnown RBP13.33□□□□□ -0.28
ECM1-206ENST00000496744 FAM43AQ8N2R8 423 aa13.33□□□□□ -0.28
ECM1-206ENST00000496744 AATFQ9NY61 560 aaKnown RBP eCLIP13.33□□□□□ -0.28
ECM1-206ENST00000496744 AK9Q5TCS8 1911 aa13.33□□□□□ -0.28
ECM1-206ENST00000496744 TBC1D12O60347 775 aa13.32□□□□□ -0.28
ECM1-206ENST00000496744 FKTNO75072 461 aa13.32□□□□□ -0.28
ECM1-206ENST00000496744 MOGSQ13724 837 aa13.32□□□□□ -0.28
ECM1-206ENST00000496744 OTUD7BQ6GQQ9 843 aa13.32□□□□□ -0.28
ECM1-206ENST00000496744 TEX11Q8IYF3 940 aa13.32□□□□□ -0.28
ECM1-206ENST00000496744 OSBPL5Q9H0X9 879 aaPredicted RBP13.32□□□□□ -0.28
ECM1-206ENST00000496744 KCNH4Q9UQ05 1017 aa13.32□□□□□ -0.28
ECM1-206ENST00000496744 COL2A1P02458 1487 aaPredicted RBP13.31□□□□□ -0.28
ECM1-206ENST00000496744 BTBD19C9JJ37 291 aa13.31□□□□□ -0.28
ECM1-206ENST00000496744 IDH1O75874 414 aaKnown RBP13.31□□□□□ -0.28
ECM1-206ENST00000496744 BAG3O95817 575 aa13.31□□□□□ -0.28
ECM1-206ENST00000496744 CETPP11597 493 aa13.31□□□□□ -0.28
ECM1-206ENST00000496744 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
ECM1-206ENST00000496744 CAP1Q01518 475 aa13.31□□□□□ -0.28
ECM1-206ENST00000496744 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
ECM1-206ENST00000496744 RRP1BQ14684 758 aaKnown RBP13.31□□□□□ -0.28
ECM1-206ENST00000496744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.31□□□□□ -0.28
ECM1-206ENST00000496744 FAM196BA6NMK8 535 aa13.3□□□□□ -0.28
ECM1-206ENST00000496744 CTNND1O60716 968 aaKnown RBP13.3□□□□□ -0.28
ECM1-206ENST00000496744 IFIT2P09913 472 aaKnown RBP13.3□□□□□ -0.28
ECM1-206ENST00000496744 PLCG2P16885 1265 aa13.3□□□□□ -0.28
ECM1-206ENST00000496744 PTPRAP18433 802 aa13.3□□□□□ -0.28
ECM1-206ENST00000496744 CYP7A1P22680 504 aa13.3□□□□□ -0.28
ECM1-206ENST00000496744 RRP1P56182 461 aaKnown RBP13.3□□□□□ -0.28
ECM1-206ENST00000496744 SCYL3Q8IZE3 742 aa13.3□□□□□ -0.28
ECM1-206ENST00000496744 MAGEB6Q8N7X4 407 aa13.3□□□□□ -0.28
ECM1-206ENST00000496744 TGFBRAP1Q8WUH2 860 aa13.3□□□□□ -0.28
ECM1-206ENST00000496744 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
ECM1-206ENST00000496744 DCTPP1Q9H773 170 aa13.3□□□□□ -0.28
ECM1-206ENST00000496744 PCDHB15Q9Y5E8 787 aa13.3□□□□□ -0.28
ECM1-206ENST00000496744 DOCK2Q92608 1830 aa13.29□□□□□ -0.28
ECM1-206ENST00000496744 SMARCA5O60264 1052 aaPredicted RBP13.29□□□□□ -0.28
ECM1-206ENST00000496744 METTL16Q86W50 562 aaKnown RBP13.29□□□□□ -0.28
ECM1-206ENST00000496744 MAPKAPK5Q8IW41 473 aa13.29□□□□□ -0.28
ECM1-206ENST00000496744 MIGA1Q8NAN2 632 aa13.29□□□□□ -0.28
ECM1-206ENST00000496744 EDC3Q96F86 508 aaKnown RBP13.29□□□□□ -0.28
ECM1-206ENST00000496744 NOL10Q9BSC4 688 aaKnown RBP13.29□□□□□ -0.28
ECM1-206ENST00000496744 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.29□□□□□ -0.28
ECM1-206ENST00000496744 AFG3L2Q9Y4W6 797 aa13.29□□□□□ -0.28
ECM1-206ENST00000496744 ZHX2Q9Y6X8 837 aa13.29□□□□□ -0.28
ECM1-206ENST00000496744 MAST2Q6P0Q8 1798 aa13.29□□□□□ -0.28
ECM1-206ENST00000496744 CCDC85CA6NKD9 419 aa13.28□□□□□ -0.28
ECM1-206ENST00000496744 CXCL11O14625 94 aa13.28□□□□□ -0.28
ECM1-206ENST00000496744 ATP5JP18859 108 aa13.28□□□□□ -0.28
ECM1-206ENST00000496744 MAP3K12Q12852 859 aa13.28□□□□□ -0.28
ECM1-206ENST00000496744 TAF1CQ15572 869 aaPredicted RBP13.28□□□□□ -0.28
ECM1-206ENST00000496744 PKN2Q16513 984 aaKnown RBP13.28□□□□□ -0.28
ECM1-206ENST00000496744 GPAT2Q6NUI2 795 aa13.28□□□□□ -0.28
ECM1-206ENST00000496744 TMED8Q6PL24 325 aaPredicted RBP13.28□□□□□ -0.28
ECM1-206ENST00000496744 RIOK1Q9BRS2 568 aaKnown RBP13.28□□□□□ -0.28
ECM1-206ENST00000496744 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
ECM1-206ENST00000496744 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
ECM1-206ENST00000496744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.28□□□□□ -0.28
ECM1-206ENST00000496744 ZCCHC17Q9NP64 241 aaKnown RBP13.28□□□□□ -0.28
ECM1-206ENST00000496744 PI4KBQ9UBF8 816 aa13.28□□□□□ -0.28
ECM1-206ENST00000496744 FLT1P17948 1338 aa13.28□□□□□ -0.28
ECM1-206ENST00000496744 TCRBV5S4A2TA0A5A2 114 aa13.27□□□□□ -0.29
ECM1-206ENST00000496744 GOLIM4O00461 696 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms