RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CCDC144CPQ8IYA2 1237 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 ENGASEQ8NFI3 743 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 FAM84BQ96KN1 310 aaPredicted RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 NAP1L5Q96NT1 182 aaPredicted RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 MYL10Q9BUA6 226 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 CBX8Q9HC52 389 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 TOMM22Q9NS69 142 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 CLIC4Q9Y696 253 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 WTIPA6NIX2 430 aaPredicted RBP15.17■□□□□ 0.02
GARNL3-220ENST00000496711 RPS8P62241 208 aaKnown RBP15.17■□□□□ 0.02
GARNL3-220ENST00000496711 SYNE3Q6ZMZ3 975 aa15.17■□□□□ 0.02
GARNL3-220ENST00000496711 PHKBQ93100 1093 aa15.17■□□□□ 0.02
GARNL3-220ENST00000496711 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
GARNL3-220ENST00000496711 ANKRD2Q9GZV1 360 aa15.17■□□□□ 0.02
GARNL3-220ENST00000496711 UBR3Q6ZT12 1888 aa15.17■□□□□ 0.02
GARNL3-220ENST00000496711 ERICH2A1L162 156 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 AP5Z1O43299 807 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 RANBP6O60518 1105 aaKnown RBP15.16■□□□□ 0.02
GARNL3-220ENST00000496711 WTAPQ15007 396 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 SF3A1Q15459 793 aaKnown RBP15.16■□□□□ 0.02
GARNL3-220ENST00000496711 KRT40Q6A162 431 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 TPTE2Q6XPS3 522 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.16■□□□□ 0.02
GARNL3-220ENST00000496711 LUZP1Q86V48 1076 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 SDR42E1Q8WUS8 393 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 AIFM3Q96NN9 605 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 FAM217BQ9NTX9 383 aaPredicted RBP15.16■□□□□ 0.02
GARNL3-220ENST00000496711 ANAPC4Q9UJX5 808 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 SPTLC2O15270 562 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 OFD1O75665 1012 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 TRIM29Q14134 588 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 FBXO33Q7Z6M2 555 aa15.16■□□□□ 0.02
GARNL3-220ENST00000496711 TDRD7Q8NHU6 1098 aaKnown RBP15.16■□□□□ 0.02
GARNL3-220ENST00000496711 FMNL1O95466 1100 aaPredicted RBP15.15■□□□□ 0.02
GARNL3-220ENST00000496711 RCAN1P53805 252 aa15.15■□□□□ 0.02
GARNL3-220ENST00000496711 SSRP1Q08945 709 aaKnown RBP15.15■□□□□ 0.02
GARNL3-220ENST00000496711 STX1AQ16623 288 aa15.15■□□□□ 0.02
GARNL3-220ENST00000496711 ANO1Q5XXA6 986 aa15.15■□□□□ 0.02
GARNL3-220ENST00000496711 WASF1Q92558 559 aa15.15■□□□□ 0.02
GARNL3-220ENST00000496711 ARHGEF1Q92888 912 aaKnown RBP15.15■□□□□ 0.02
GARNL3-220ENST00000496711 BRIP1Q9BX63 1249 aa15.15■□□□□ 0.02
GARNL3-220ENST00000496711 DNAJC25Q9H1X3 360 aa15.15■□□□□ 0.02
GARNL3-220ENST00000496711 IFNAR1P17181 557 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 KLRK1P26718 216 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 ZNF165P49910 485 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 GNL2Q13823 731 aaKnown RBP15.14■□□□□ 0.01
GARNL3-220ENST00000496711 RTN1Q16799 776 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 FAM182BQ5T319 152 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 FMR1NBQ8N0W7 255 aaPredicted RBP15.14■□□□□ 0.01
GARNL3-220ENST00000496711 TMTC2Q8N394 836 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 ZKSCAN3Q9BRR0 538 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 SLC26A6Q9BXS9 759 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 MINDY4BA8MYZ0 360 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 KIAA2012Q0VF49 1180 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 AMIGO3Q86WK7 504 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 STK11IPQ8N1F8 1099 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 ESR2Q92731 530 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 UBAC1Q9BSL1 405 aa15.14■□□□□ 0.01
GARNL3-220ENST00000496711 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.14■□□□□ 0.01
GARNL3-220ENST00000496711 HIBADHP31937 336 aaKnown RBP15.13■□□□□ 0.01
GARNL3-220ENST00000496711 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
GARNL3-220ENST00000496711 TRIM22Q8IYM9 498 aa15.13■□□□□ 0.01
GARNL3-220ENST00000496711 ZNF384Q8TF68 577 aa15.13■□□□□ 0.01
GARNL3-220ENST00000496711 CCDC196A0A1B0GTZ2 297 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 A0A1B0GVL5 298 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 GOLGA6L6A8MZA4 724 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 TPM3P06753 285 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 U2AF2P26368 475 aaKnown RBP eCLIP15.12■□□□□ 0.01
GARNL3-220ENST00000496711 ZNF654Q8IZM8 581 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 CCDC24Q8N4L8 307 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
GARNL3-220ENST00000496711 TNKSO95271 1327 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 NAV1Q8NEY1 1877 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 ZBTB22O15209 634 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 NPHP1O15259 732 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 PCP11498 1178 aaKnown RBP15.12■□□□□ 0.01
GARNL3-220ENST00000496711 RFC4P35249 363 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 NDUFA8P51970 172 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 SLC39A14Q15043 492 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 MPNDQ8N594 471 aa15.12■□□□□ 0.01
GARNL3-220ENST00000496711 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-220ENST00000496711 TM4SF1P30408 202 aa15.11■□□□□ 0.01
GARNL3-220ENST00000496711 MECOMQ03112 1051 aa15.11■□□□□ 0.01
GARNL3-220ENST00000496711 SEC23AQ15436 765 aa15.11■□□□□ 0.01
GARNL3-220ENST00000496711 MEX3CQ5U5Q3 659 aaKnown RBP15.11■□□□□ 0.01
GARNL3-220ENST00000496711 TMED8Q6PL24 325 aaPredicted RBP15.11■□□□□ 0.01
GARNL3-220ENST00000496711 C11orf57Q6ZUT1 292 aaPredicted RBP15.11■□□□□ 0.01
GARNL3-220ENST00000496711 JMYQ8N9B5 988 aa15.11■□□□□ 0.01
GARNL3-220ENST00000496711 ANO10Q9NW15 660 aa15.11■□□□□ 0.01
GARNL3-220ENST00000496711 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
GARNL3-220ENST00000496711 MROH7-TTC4A0A0A0MT08 1334 aa15.11■□□□□ 0.01
GARNL3-220ENST00000496711 PPP6R2O75170 966 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 DEXIO95424 95 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 AXDND1Q5T1B0 1012 aaPredicted RBP15.1■□□□□ 0.01
GARNL3-220ENST00000496711 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
GARNL3-220ENST00000496711 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.1■□□□□ 0.01
GARNL3-220ENST00000496711 TTC12Q9H892 705 aaPredicted RBP15.1■□□□□ 0.01
GARNL3-220ENST00000496711 TAOK2Q9UL54 1235 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms