RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 CLMNQ96JQ2 1002 aa27.56■■■□□ 2
CHRD-217ENST00000496527 DOCK2Q92608 1830 aa27.55■■■□□ 2
CHRD-217ENST00000496527 IGHDP01880 384 aa27.55■■■□□ 2
CHRD-217ENST00000496527 PDE6AP16499 860 aa27.55■■■□□ 2
CHRD-217ENST00000496527 MAP3K9P80192 1104 aa27.55■■■□□ 2
CHRD-217ENST00000496527 TSHZ3Q63HK5 1081 aa27.55■■■□□ 2
CHRD-217ENST00000496527 CERS3Q8IU89 383 aa27.55■■■□□ 2
CHRD-217ENST00000496527 MIGA1Q8NAN2 632 aa27.55■■■□□ 2
CHRD-217ENST00000496527 CSRNP1Q96S65 589 aa27.55■■■□□ 2
CHRD-217ENST00000496527 BEGAINQ9BUH8 593 aa27.55■■■□□ 2
CHRD-217ENST00000496527 ZNF341Q9BYN7 854 aa27.55■■■□□ 2
CHRD-217ENST00000496527 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.55■■■□□ 2
CHRD-217ENST00000496527 TTC41PQ6P2S7 1318 aa27.55■■■□□ 2
CHRD-217ENST00000496527 ERC2O15083 957 aa27.54■■■□□ 2
CHRD-217ENST00000496527 DYNLL1P63167 89 aaKnown RBP27.54■■■□□ 2
CHRD-217ENST00000496527 AK9Q5TCS8 1911 aa27.54■■■□□ 2
CHRD-217ENST00000496527 SMC5Q8IY18 1101 aa27.54■■■□□ 2
CHRD-217ENST00000496527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.54■■■□□ 2
CHRD-217ENST00000496527 OTUD7AQ8TE49 926 aaPredicted RBP27.54■■■□□ 2
CHRD-217ENST00000496527 MX1P20591 662 aa27.53■■■□□ 2
CHRD-217ENST00000496527 SH3BP5LQ7L8J4 393 aa27.53■■■□□ 2
CHRD-217ENST00000496527 TGFBRAP1Q8WUH2 860 aa27.53■■■□□ 2
CHRD-217ENST00000496527 WRNIP1Q96S55 665 aa27.53■■■□□ 2
CHRD-217ENST00000496527 CSADQ9Y600 493 aa27.53■■■□□ 2
CHRD-217ENST00000496527 ZNF532Q9HCE3 1301 aa27.52■■■□□ 2
CHRD-217ENST00000496527 DDTLA6NHG4 134 aaPredicted RBP27.52■■■□□ 2
CHRD-217ENST00000496527 MKRN3Q13064 507 aaKnown RBP27.52■■■□□ 2
CHRD-217ENST00000496527 B4GALNT3Q6L9W6 998 aa27.52■■■□□ 2
CHRD-217ENST00000496527 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.52■■■□□ 2
CHRD-217ENST00000496527 OSBPL5Q9H0X9 879 aaPredicted RBP27.52■■■□□ 2
CHRD-217ENST00000496527 SPRYD7Q5W111 196 aa27.51■■□□□ 1.99
CHRD-217ENST00000496527 REM2Q8IYK8 340 aaPredicted RBP27.51■■□□□ 1.99
CHRD-217ENST00000496527 ELP3Q9H9T3 547 aa27.51■■□□□ 1.99
CHRD-217ENST00000496527 MAGEB6P1A0A0J9YX57 407 aa27.5■■□□□ 1.99
CHRD-217ENST00000496527 GLRX3O76003 335 aaKnown RBP27.5■■□□□ 1.99
CHRD-217ENST00000496527 VGLL4Q14135 290 aa27.5■■□□□ 1.99
CHRD-217ENST00000496527 MAPKAPK5Q8IW41 473 aa27.5■■□□□ 1.99
CHRD-217ENST00000496527 WNK4Q96J92 1243 aa27.5■■□□□ 1.99
CHRD-217ENST00000496527 ATRNL1Q5VV63 1379 aa27.49■■□□□ 1.99
CHRD-217ENST00000496527 ADD2P35612 726 aa27.49■■□□□ 1.99
CHRD-217ENST00000496527 ZSCAN25Q6NSZ9 544 aa27.49■■□□□ 1.99
CHRD-217ENST00000496527 LNPKQ9C0E8 428 aa27.49■■□□□ 1.99
CHRD-217ENST00000496527 FLT1P17948 1338 aa27.48■■□□□ 1.99
CHRD-217ENST00000496527 TCRBV5S4A2TA0A5A2 114 aa27.48■■□□□ 1.99
CHRD-217ENST00000496527 FOXN1O15353 648 aa27.48■■□□□ 1.99
CHRD-217ENST00000496527 ZBTB48P10074 688 aaPredicted RBP27.48■■□□□ 1.99
CHRD-217ENST00000496527 USP5P45974 858 aa27.48■■□□□ 1.99
CHRD-217ENST00000496527 PI4K2BQ8TCG2 481 aa27.48■■□□□ 1.99
CHRD-217ENST00000496527 RIOK1Q9BRS2 568 aaKnown RBP27.48■■□□□ 1.99
CHRD-217ENST00000496527 ZNF112Q9UJU3 913 aa27.48■■□□□ 1.99
CHRD-217ENST00000496527 SALL3Q9BXA9 1300 aa27.47■■□□□ 1.99
CHRD-217ENST00000496527 COL2A1P02458 1487 aaPredicted RBP27.47■■□□□ 1.99
CHRD-217ENST00000496527 ZKSCAN4Q969J2 545 aaPredicted RBP27.47■■□□□ 1.99
CHRD-217ENST00000496527 DHX36Q9H2U1 1008 aaKnown RBP27.47■■□□□ 1.99
CHRD-217ENST00000496527 UBE3CQ15386 1083 aa27.46■■□□□ 1.99
CHRD-217ENST00000496527 CHD1LQ86WJ1 897 aa27.46■■□□□ 1.99
CHRD-217ENST00000496527 KBTBD3Q8NAB2 608 aa27.46■■□□□ 1.99
CHRD-217ENST00000496527 OPTNQ96CV9 577 aa27.46■■□□□ 1.99
CHRD-217ENST00000496527 OTOFQ9HC10 1997 aa27.46■■□□□ 1.99
CHRD-217ENST00000496527 PCNTO95613 3336 aa27.46■■□□□ 1.99
CHRD-217ENST00000496527 CA12O43570 354 aa27.45■■□□□ 1.98
CHRD-217ENST00000496527 INPP5BP32019 993 aa27.45■■□□□ 1.98
CHRD-217ENST00000496527 CTCFP49711 727 aaPredicted RBP27.45■■□□□ 1.98
CHRD-217ENST00000496527 MAP3K10Q02779 954 aa27.45■■□□□ 1.98
CHRD-217ENST00000496527 NUCB1Q02818 461 aa27.45■■□□□ 1.98
CHRD-217ENST00000496527 SREBF2Q12772 1141 aa27.45■■□□□ 1.98
CHRD-217ENST00000496527 CRNKL1Q9BZJ0 848 aaKnown RBP27.45■■□□□ 1.98
CHRD-217ENST00000496527 STAP2Q9UGK3 403 aa27.45■■□□□ 1.98
CHRD-217ENST00000496527 SNCAIPQ9Y6H5 919 aa27.45■■□□□ 1.98
CHRD-217ENST00000496527 TBC1D12O60347 775 aa27.44■■□□□ 1.98
CHRD-217ENST00000496527 PDE1AP54750 535 aa27.44■■□□□ 1.98
CHRD-217ENST00000496527 SLFNL1Q499Z3 407 aa27.44■■□□□ 1.98
CHRD-217ENST00000496527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.44■■□□□ 1.98
CHRD-217ENST00000496527 PI4KBQ9UBF8 816 aa27.44■■□□□ 1.98
CHRD-217ENST00000496527 MANSC4A6NHS7 340 aaPredicted RBP27.43■■□□□ 1.98
CHRD-217ENST00000496527 GJA5P36382 358 aa27.43■■□□□ 1.98
CHRD-217ENST00000496527 ERO1BQ86YB8 467 aa27.43■■□□□ 1.98
CHRD-217ENST00000496527 SAP30BPQ9UHR5 308 aaKnown RBP27.43■■□□□ 1.98
CHRD-217ENST00000496527 PALD1Q9ULE6 856 aa27.43■■□□□ 1.98
CHRD-217ENST00000496527 SPDYE5A6NIY4 337 aa27.42■■□□□ 1.98
CHRD-217ENST00000496527 PHF20L1A8MW92 1017 aa27.42■■□□□ 1.98
CHRD-217ENST00000496527 SLURP2P0DP57 97 aa27.42■■□□□ 1.98
CHRD-217ENST00000496527 TM4SF4P48230 202 aa27.42■■□□□ 1.98
CHRD-217ENST00000496527 LRRFIP1Q32MZ4 808 aaKnown RBP27.42■■□□□ 1.98
CHRD-217ENST00000496527 LCORLQ8N3X6 602 aa27.42■■□□□ 1.98
CHRD-217ENST00000496527 CNKSR2Q8WXI2 1034 aa27.42■■□□□ 1.98
CHRD-217ENST00000496527 OTUD5Q96G74 571 aa27.42■■□□□ 1.98
CHRD-217ENST00000496527 MBD4O95243 580 aa27.41■■□□□ 1.98
CHRD-217ENST00000496527 CHGBP05060 677 aa27.41■■□□□ 1.98
CHRD-217ENST00000496527 HLA-DOAP06340 250 aa27.41■■□□□ 1.98
CHRD-217ENST00000496527 INHBEP58166 350 aa27.41■■□□□ 1.98
CHRD-217ENST00000496527 NOL9Q5SY16 702 aaKnown RBP27.41■■□□□ 1.98
CHRD-217ENST00000496527 ARMT1Q9H993 441 aa27.41■■□□□ 1.98
CHRD-217ENST00000496527 HERC5Q9UII4 1024 aaKnown RBP27.41■■□□□ 1.98
CHRD-217ENST00000496527 CDK5RAP2Q96SN8 1893 aa27.4■■□□□ 1.98
CHRD-217ENST00000496527 RNF113AO15541 343 aaKnown RBP27.4■■□□□ 1.98
CHRD-217ENST00000496527 ZFYP08048 801 aaPredicted RBP27.4■■□□□ 1.98
CHRD-217ENST00000496527 FOXP4Q8IVH2 680 aaPredicted RBP27.4■■□□□ 1.98
CHRD-217ENST00000496527 RNF186Q9NXI6 227 aa27.4■■□□□ 1.98
CHRD-217ENST00000496527 FOCADQ5VW36 1801 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms