RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 PFASO15067 1338 aa14.88□□□□□ -0.03
ATG3-209ENST00000496423 VCANP13611 3396 aa14.87□□□□□ -0.03
ATG3-209ENST00000496423 DOCK3Q8IZD9 2030 aa14.87□□□□□ -0.03
ATG3-209ENST00000496423 CALD1Q05682 793 aaKnown RBP14.87□□□□□ -0.03
ATG3-209ENST00000496423 LRRC26Q2I0M4 334 aa14.87□□□□□ -0.03
ATG3-209ENST00000496423 C1QTNF1Q9BXJ1 281 aa14.87□□□□□ -0.03
ATG3-209ENST00000496423 MBIPQ9NS73 344 aa14.87□□□□□ -0.03
ATG3-209ENST00000496423 COL6A1P12109 1028 aa14.86□□□□□ -0.03
ATG3-209ENST00000496423 GCLCP48506 637 aaPredicted RBP14.86□□□□□ -0.03
ATG3-209ENST00000496423 GCKRQ14397 625 aa14.86□□□□□ -0.03
ATG3-209ENST00000496423 CCDC57Q2TAC2 916 aa14.86□□□□□ -0.03
ATG3-209ENST00000496423 ATXN2LQ8WWM7 1075 aaKnown RBP14.86□□□□□ -0.03
ATG3-209ENST00000496423 STK31Q9BXU1 1019 aa14.86□□□□□ -0.03
ATG3-209ENST00000496423 TRIM35Q9UPQ4 493 aa14.86□□□□□ -0.03
ATG3-209ENST00000496423 SUGT1Q9Y2Z0 365 aa14.86□□□□□ -0.03
ATG3-209ENST00000496423 GYG1P46976 350 aa14.85□□□□□ -0.03
ATG3-209ENST00000496423 GNAI1P63096 354 aa14.85□□□□□ -0.03
ATG3-209ENST00000496423 PABPC4Q13310 644 aaKnown RBP eCLIP14.85□□□□□ -0.03
ATG3-209ENST00000496423 HHIPL2Q6UWX4 724 aa14.85□□□□□ -0.03
ATG3-209ENST00000496423 HCN4Q9Y3Q4 1203 aa14.85□□□□□ -0.03
ATG3-209ENST00000496423 CHAF1AQ13111 956 aaPredicted RBP14.84□□□□□ -0.03
ATG3-209ENST00000496423 CAVIN4Q5BKX8 364 aa14.84□□□□□ -0.03
ATG3-209ENST00000496423 SCYL3Q8IZE3 742 aa14.84□□□□□ -0.03
ATG3-209ENST00000496423 RUNDC1Q96C34 613 aa14.84□□□□□ -0.03
ATG3-209ENST00000496423 FAM84BQ96KN1 310 aaPredicted RBP14.84□□□□□ -0.03
ATG3-209ENST00000496423 AGTPBP1Q9UPW5 1226 aa14.84□□□□□ -0.03
ATG3-209ENST00000496423 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
ATG3-209ENST00000496423 SPTBN5Q9NRC6 3674 aaKnown RBP14.84□□□□□ -0.03
ATG3-209ENST00000496423 A0A1B0GUL6 1792 aa14.83□□□□□ -0.03
ATG3-209ENST00000496423 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
ATG3-209ENST00000496423 SHHQ15465 462 aa14.83□□□□□ -0.04
ATG3-209ENST00000496423 APOBEC3HQ6NTF7 200 aaKnown RBP14.83□□□□□ -0.04
ATG3-209ENST00000496423 SENP6Q9GZR1 1112 aaPredicted RBP14.83□□□□□ -0.04
ATG3-209ENST00000496423 LRRFIP2Q9Y608 721 aaKnown RBP14.83□□□□□ -0.04
ATG3-209ENST00000496423 SYNGAP1Q96PV0 1343 aa14.83□□□□□ -0.04
ATG3-209ENST00000496423 PTPRAP18433 802 aa14.82□□□□□ -0.04
ATG3-209ENST00000496423 TCP10Q12799 353 aa14.82□□□□□ -0.04
ATG3-209ENST00000496423 TRIM32Q13049 653 aa14.82□□□□□ -0.04
ATG3-209ENST00000496423 CCDC146Q8IYE0 955 aa14.82□□□□□ -0.04
ATG3-209ENST00000496423 NUDT12Q9BQG2 462 aa14.82□□□□□ -0.04
ATG3-209ENST00000496423 TTYH1Q9H313 450 aaPredicted RBP14.82□□□□□ -0.04
ATG3-209ENST00000496423 GJD2Q9UKL4 321 aa14.82□□□□□ -0.04
ATG3-209ENST00000496423 TTC28Q96AY4 2481 aa14.81□□□□□ -0.04
ATG3-209ENST00000496423 XRCC5P13010 732 aaKnown RBP14.81□□□□□ -0.04
ATG3-209ENST00000496423 CYP2B6P20813 491 aa14.81□□□□□ -0.04
ATG3-209ENST00000496423 MAP3K21Q5TCX8 1036 aa14.81□□□□□ -0.04
ATG3-209ENST00000496423 TRIB2Q92519 343 aa14.81□□□□□ -0.04
ATG3-209ENST00000496423 IFT57Q9NWB7 429 aa14.81□□□□□ -0.04
ATG3-209ENST00000496423 ZKSCAN1P17029 563 aaPredicted RBP14.8□□□□□ -0.04
ATG3-209ENST00000496423 ZEB1P37275 1124 aaPredicted RBP14.8□□□□□ -0.04
ATG3-209ENST00000496423 CASP7P55210 303 aa14.8□□□□□ -0.04
ATG3-209ENST00000496423 MRPS5P82675 430 aaKnown RBP14.8□□□□□ -0.04
ATG3-209ENST00000496423 PDE3AQ14432 1141 aa14.8□□□□□ -0.04
ATG3-209ENST00000496423 CCAR1Q8IX12 1150 aaKnown RBP14.8□□□□□ -0.04
ATG3-209ENST00000496423 PROCA1Q8NCQ7 364 aaPredicted RBP14.8□□□□□ -0.04
ATG3-209ENST00000496423 CCER1Q8TC90 406 aaPredicted RBP14.8□□□□□ -0.04
ATG3-209ENST00000496423 ADAMTS19Q8TE59 1207 aa14.8□□□□□ -0.04
ATG3-209ENST00000496423 SOCS4Q8WXH5 440 aa14.8□□□□□ -0.04
ATG3-209ENST00000496423 ASB2Q96Q27 587 aa14.8□□□□□ -0.04
ATG3-209ENST00000496423 UHRF1Q96T88 793 aaPredicted RBP14.8□□□□□ -0.04
ATG3-209ENST00000496423 TRIM75PA6NK02 468 aa14.79□□□□□ -0.04
ATG3-209ENST00000496423 ZNF853P0CG23 659 aa14.79□□□□□ -0.04
ATG3-209ENST00000496423 GRIK5Q16478 980 aa14.79□□□□□ -0.04
ATG3-209ENST00000496423 LINS1Q8NG48 757 aa14.79□□□□□ -0.04
ATG3-209ENST00000496423 GAS2L1Q99501 681 aaPredicted RBP14.79□□□□□ -0.04
ATG3-209ENST00000496423 THEGQ9P2T0 379 aa14.79□□□□□ -0.04
ATG3-209ENST00000496423 IQSEC3Q9UPP2 1182 aaPredicted RBP14.79□□□□□ -0.04
ATG3-209ENST00000496423 CTNND1O60716 968 aaKnown RBP14.78□□□□□ -0.04
ATG3-209ENST00000496423 CACNB2Q08289 660 aaPredicted RBP14.78□□□□□ -0.04
ATG3-209ENST00000496423 LHX8Q68G74 356 aa14.78□□□□□ -0.04
ATG3-209ENST00000496423 LMBR1LQ6UX01 489 aa14.78□□□□□ -0.04
ATG3-209ENST00000496423 FBXO33Q7Z6M2 555 aa14.78□□□□□ -0.04
ATG3-209ENST00000496423 C8orf58Q8NAV2 365 aa14.78□□□□□ -0.04
ATG3-209ENST00000496423 EYSQ5T1H1 3165 aa14.78□□□□□ -0.04
ATG3-209ENST00000496423 MSCO60682 206 aa14.77□□□□□ -0.05
ATG3-209ENST00000496423 FOXO4P98177 505 aa14.77□□□□□ -0.05
ATG3-209ENST00000496423 WDR43Q15061 677 aaKnown RBP eCLIP14.77□□□□□ -0.05
ATG3-209ENST00000496423 ZSCAN29Q8IWY8 852 aaPredicted RBP14.77□□□□□ -0.05
ATG3-209ENST00000496423 ZNF594Q96JF6 807 aaPredicted RBP14.77□□□□□ -0.05
ATG3-209ENST00000496423 TBC1D2Q9BYX2 928 aa14.77□□□□□ -0.05
ATG3-209ENST00000496423 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.05
ATG3-209ENST00000496423 PRUNE2Q8WUY3 3088 aa14.77□□□□□ -0.05
ATG3-209ENST00000496423 PTPRFP10586 1907 aa14.76□□□□□ -0.05
ATG3-209ENST00000496423 MROH5Q6ZUA9 1318 aa14.76□□□□□ -0.05
ATG3-209ENST00000496423 PHF20L1A8MW92 1017 aa14.76□□□□□ -0.05
ATG3-209ENST00000496423 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
ATG3-209ENST00000496423 RTP1P59025 263 aa14.76□□□□□ -0.05
ATG3-209ENST00000496423 C9orf50Q5SZB4 431 aa14.76□□□□□ -0.05
ATG3-209ENST00000496423 WDR66Q8TBY9 1149 aa14.76□□□□□ -0.05
ATG3-209ENST00000496423 DNAAF4Q8WXU2 420 aa14.76□□□□□ -0.05
ATG3-209ENST00000496423 PPM1EQ8WY54 764 aa14.76□□□□□ -0.05
ATG3-209ENST00000496423 PRDM5Q9NQX1 630 aaPredicted RBP14.76□□□□□ -0.05
ATG3-209ENST00000496423 ATP11BQ9Y2G3 1177 aa14.76□□□□□ -0.05
ATG3-209ENST00000496423 MAST2Q6P0Q8 1798 aa14.75□□□□□ -0.05
ATG3-209ENST00000496423 MAPK4P31152 587 aa14.75□□□□□ -0.05
ATG3-209ENST00000496423 RGS2P41220 211 aa14.75□□□□□ -0.05
ATG3-209ENST00000496423 CDC42EP5Q6NZY7 148 aa14.75□□□□□ -0.05
ATG3-209ENST00000496423 CWC22Q9HCG8 908 aaKnown RBP14.75□□□□□ -0.05
ATG3-209ENST00000496423 USP40Q9NVE5 1235 aa14.75□□□□□ -0.05
ATG3-209ENST00000496423 LAMA2P24043 3122 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms