RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
NCKAP1-208ENST00000495619 SMYD4Q8IYR2 804 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-208ENST00000495619 FBXL6Q8N531 539 aa9.12□□□□□ -0.95
NCKAP1-208ENST00000495619 ELMO3Q96BJ8 720 aa9.12□□□□□ -0.95
NCKAP1-208ENST00000495619 TBC1D32Q96NH3 1257 aa9.12□□□□□ -0.95
NCKAP1-208ENST00000495619 METTL22Q9BUU2 404 aaPredicted RBP9.12□□□□□ -0.95
NCKAP1-208ENST00000495619 SEMA6CQ9H3T2 930 aa9.12□□□□□ -0.95
NCKAP1-208ENST00000495619 WDR64B1ANS9 1081 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 TAGLNQ01995 201 aaKnown RBP9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 TRIM26Q12899 539 aaPredicted RBP9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 MEI1Q5TIA1 1274 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 DUSP27Q5VZP5 1158 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 INTS5Q6P9B9 1019 aaKnown RBP9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 RNF214Q8ND24 703 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 SHKBP1Q8TBC3 707 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 OSBPL1AQ9BXW6 950 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 DISC1Q9NRI5 854 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 CACNA2D2Q9NY47 1150 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 PRKAG2Q9UGJ0 569 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 PCOLCE2Q9UKZ9 415 aa9.11□□□□□ -0.95
NCKAP1-208ENST00000495619 PWP1Q13610 501 aa9.1□□□□□ -0.95
NCKAP1-208ENST00000495619 HDXQ7Z353 690 aa9.1□□□□□ -0.95
NCKAP1-208ENST00000495619 MIR1-1HGQ9H1L0 117 aa9.1□□□□□ -0.95
NCKAP1-208ENST00000495619 LEMD3Q9Y2U8 911 aa9.1□□□□□ -0.95
NCKAP1-208ENST00000495619 PCDHGC5Q9Y5F6 944 aa9.1□□□□□ -0.95
NCKAP1-208ENST00000495619 COBLO75128 1261 aa9.09□□□□□ -0.95
NCKAP1-208ENST00000495619 LIG3P49916 1009 aa9.09□□□□□ -0.95
NCKAP1-208ENST00000495619 TTLL4Q14679 1199 aa9.09□□□□□ -0.95
NCKAP1-208ENST00000495619 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
NCKAP1-208ENST00000495619 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
NCKAP1-208ENST00000495619 ZAR1Q86SH2 424 aa9.09□□□□□ -0.95
NCKAP1-208ENST00000495619 KCT2Q8NC54 265 aa9.09□□□□□ -0.95
NCKAP1-208ENST00000495619 FANCGO15287 622 aa9.08□□□□□ -0.96
NCKAP1-208ENST00000495619 HCLS1P14317 486 aaPredicted RBP9.08□□□□□ -0.96
NCKAP1-208ENST00000495619 AGMOQ6ZNB7 445 aa9.08□□□□□ -0.96
NCKAP1-208ENST00000495619 ZDHHC13Q8IUH4 622 aa9.08□□□□□ -0.96
NCKAP1-208ENST00000495619 RELL1Q8IUW5 271 aa9.08□□□□□ -0.96
NCKAP1-208ENST00000495619 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.08□□□□□ -0.96
NCKAP1-208ENST00000495619 SNCAIPQ9Y6H5 919 aa9.08□□□□□ -0.96
NCKAP1-208ENST00000495619 DCDC2CA8MYV0 355 aa9.07□□□□□ -0.96
NCKAP1-208ENST00000495619 CTSHP09668 335 aa9.07□□□□□ -0.96
NCKAP1-208ENST00000495619 LRP8Q14114 963 aa9.07□□□□□ -0.96
NCKAP1-208ENST00000495619 CYP27C1Q4G0S4 372 aa9.07□□□□□ -0.96
NCKAP1-208ENST00000495619 MPRIPQ6WCQ1 1025 aa9.07□□□□□ -0.96
NCKAP1-208ENST00000495619 ZNF16P17020 682 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-208ENST00000495619 LGR6Q9HBX8 967 aa9.06□□□□□ -0.96
NCKAP1-208ENST00000495619 ZFP64Q9NPA5 681 aa9.06□□□□□ -0.96
NCKAP1-208ENST00000495619 PIM2Q9P1W9 311 aa9.06□□□□□ -0.96
NCKAP1-208ENST00000495619 CSADQ9Y600 493 aa9.06□□□□□ -0.96
NCKAP1-208ENST00000495619 TGFB1P01137 390 aa9.05□□□□□ -0.96
NCKAP1-208ENST00000495619 F13BP05160 661 aa9.05□□□□□ -0.96
NCKAP1-208ENST00000495619 ARTNQ5T4W7 220 aa9.05□□□□□ -0.96
NCKAP1-208ENST00000495619 RASIP1Q5U651 963 aa9.05□□□□□ -0.96
NCKAP1-208ENST00000495619 C12orf40Q86WS4 652 aa9.05□□□□□ -0.96
NCKAP1-208ENST00000495619 ZNF507Q8TCN5 953 aa9.05□□□□□ -0.96
NCKAP1-208ENST00000495619 PCMTD2Q9NV79 361 aa9.05□□□□□ -0.96
NCKAP1-208ENST00000495619 TSNAXIP1Q2TAA8 658 aa9.04□□□□□ -0.96
NCKAP1-208ENST00000495619 PPM1JQ5JR12 505 aa9.04□□□□□ -0.96
NCKAP1-208ENST00000495619 OGFOD3Q6PK18 319 aa9.04□□□□□ -0.96
NCKAP1-208ENST00000495619 CCDC84Q86UT8 332 aaPredicted RBP9.04□□□□□ -0.96
NCKAP1-208ENST00000495619 ISL2Q96A47 359 aa9.04□□□□□ -0.96
NCKAP1-208ENST00000495619 SSTR4P31391 388 aa9.03□□□□□ -0.96
NCKAP1-208ENST00000495619 NBPF11Q86T75 865 aa9.03□□□□□ -0.96
NCKAP1-208ENST00000495619 GAL3ST3Q96A11 431 aa9.03□□□□□ -0.96
NCKAP1-208ENST00000495619 RSRP1Q9BUV0 290 aa9.03□□□□□ -0.96
NCKAP1-208ENST00000495619 C1GALT1Q9NS00 363 aa9.03□□□□□ -0.96
NCKAP1-208ENST00000495619 TACC3Q9Y6A5 838 aa9.03□□□□□ -0.96
NCKAP1-208ENST00000495619 RBM47A0AV96 593 aaKnown RBP9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 PRAMEF27A3QJZ7 478 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 PRR19A6NJB7 356 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 CYP26A1O43174 497 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 BPNT1O95861 308 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 GBP2P32456 591 aaPredicted RBP9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 ADMP35318 185 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 ETF1P62495 437 aaKnown RBP9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 SEPT6Q14141 434 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 WIPI1Q5MNZ9 446 aaPredicted RBP9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 ZBTB37Q5TC79 503 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 LRFN4Q6PJG9 635 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 SEZ6L2Q6UXD5 910 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 Q8N3U1 123 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 JARID2Q92833 1246 aaPredicted RBP9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 PLPPR2Q96GM1 343 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 CCDC9Q9Y3X0 531 aaKnown RBP9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 PCDHB5Q9Y5E4 795 aa9.02□□□□□ -0.97
NCKAP1-208ENST00000495619 NEFMP07197 916 aa9.01□□□□□ -0.97
NCKAP1-208ENST00000495619 FOSL1P15407 271 aa9.01□□□□□ -0.97
NCKAP1-208ENST00000495619 TFE3P19532 575 aaPredicted RBP9.01□□□□□ -0.97
NCKAP1-208ENST00000495619 MRPL58Q14197 206 aaKnown RBP9.01□□□□□ -0.97
NCKAP1-208ENST00000495619 CYFIP1Q7L576 1253 aa9.01□□□□□ -0.97
NCKAP1-208ENST00000495619 PHC3Q8NDX5 983 aa9.01□□□□□ -0.97
NCKAP1-208ENST00000495619 TMEM74Q96NL1 305 aa9.01□□□□□ -0.97
NCKAP1-208ENST00000495619 FAM170BA6NMN3 283 aa9□□□□□ -0.97
NCKAP1-208ENST00000495619 DYNC1LI2O43237 492 aaPredicted RBP9□□□□□ -0.97
NCKAP1-208ENST00000495619 HYAL3O43820 417 aaPredicted RBP9□□□□□ -0.97
NCKAP1-208ENST00000495619 CD97P48960 835 aa9□□□□□ -0.97
NCKAP1-208ENST00000495619 LMNB2Q03252 620 aa9□□□□□ -0.97
NCKAP1-208ENST00000495619 PTPN11Q06124 597 aaPredicted RBP9□□□□□ -0.97
NCKAP1-208ENST00000495619 RING1Q06587 406 aa9□□□□□ -0.97
NCKAP1-208ENST00000495619 PDE4BQ07343 736 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms