RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 TIFAQ96CG3 184 aa14.07□□□□□ -0.16
TRIM59-206ENST00000494486 ZDHHC15Q96MV8 337 aa14.07□□□□□ -0.16
TRIM59-206ENST00000494486 PICK1Q9NRD5 415 aa14.07□□□□□ -0.16
TRIM59-206ENST00000494486 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
TRIM59-206ENST00000494486 ATP11BQ9Y2G3 1177 aa14.07□□□□□ -0.16
TRIM59-206ENST00000494486 NCOR1O75376 2440 aa14.06□□□□□ -0.16
TRIM59-206ENST00000494486 PTPRAP18433 802 aa14.06□□□□□ -0.16
TRIM59-206ENST00000494486 CCND3P30281 292 aaPredicted RBP14.06□□□□□ -0.16
TRIM59-206ENST00000494486 CCDC85BQ15834 202 aaPredicted RBP14.06□□□□□ -0.16
TRIM59-206ENST00000494486 NUDT12Q9BQG2 462 aa14.06□□□□□ -0.16
TRIM59-206ENST00000494486 PRDM5Q9NQX1 630 aaPredicted RBP14.06□□□□□ -0.16
TRIM59-206ENST00000494486 CSF1RP07333 972 aa14.05□□□□□ -0.16
TRIM59-206ENST00000494486 ZKSCAN1P17029 563 aaPredicted RBP14.05□□□□□ -0.16
TRIM59-206ENST00000494486 APOBEC3HQ6NTF7 200 aaKnown RBP14.05□□□□□ -0.16
TRIM59-206ENST00000494486 SCYL3Q8IZE3 742 aa14.05□□□□□ -0.16
TRIM59-206ENST00000494486 SOCS4Q8WXH5 440 aa14.05□□□□□ -0.16
TRIM59-206ENST00000494486 PLA2G12BQ9BX93 195 aa14.05□□□□□ -0.16
TRIM59-206ENST00000494486 BDP1A6H8Y1 2624 aa14.04□□□□□ -0.16
TRIM59-206ENST00000494486 ANKRD18BA2A2Z9 1011 aa14.04□□□□□ -0.16
TRIM59-206ENST00000494486 H7C1W4 665 aa14.04□□□□□ -0.16
TRIM59-206ENST00000494486 SMIM22K7EJ46 135 aa14.04□□□□□ -0.16
TRIM59-206ENST00000494486 DNM1LO00429 736 aa14.04□□□□□ -0.16
TRIM59-206ENST00000494486 DUSP27Q5VZP5 1158 aa14.04□□□□□ -0.16
TRIM59-206ENST00000494486 PRDM12Q9H4Q4 367 aa14.04□□□□□ -0.16
TRIM59-206ENST00000494486 C11orf16Q9NQ32 467 aa14.04□□□□□ -0.16
TRIM59-206ENST00000494486 LAS1LQ9Y4W2 734 aaKnown RBP14.04□□□□□ -0.16
TRIM59-206ENST00000494486 IGKV5-2P06315 115 aa14.03□□□□□ -0.16
TRIM59-206ENST00000494486 HIBADHP31937 336 aaKnown RBP14.03□□□□□ -0.16
TRIM59-206ENST00000494486 FOXK2Q01167 660 aa14.03□□□□□ -0.16
TRIM59-206ENST00000494486 SLC39A5Q6ZMH5 540 aa14.03□□□□□ -0.16
TRIM59-206ENST00000494486 TBC1D22AQ8WUA7 517 aa14.03□□□□□ -0.16
TRIM59-206ENST00000494486 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
TRIM59-206ENST00000494486 LTBP2Q14767 1821 aa14.03□□□□□ -0.16
TRIM59-206ENST00000494486 SPEF2Q9C093 1822 aa14.03□□□□□ -0.16
TRIM59-206ENST00000494486 MUC6Q6W4X9 2439 aa14.03□□□□□ -0.16
TRIM59-206ENST00000494486 CDH23Q9H251 3354 aa14.03□□□□□ -0.16
TRIM59-206ENST00000494486 MAST2Q6P0Q8 1798 aa14.02□□□□□ -0.16
TRIM59-206ENST00000494486 MSCO60682 206 aa14.02□□□□□ -0.17
TRIM59-206ENST00000494486 IGFBP4P22692 258 aa14.02□□□□□ -0.17
TRIM59-206ENST00000494486 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRIM59-206ENST00000494486 GRIK5Q16478 980 aa14.02□□□□□ -0.17
TRIM59-206ENST00000494486 UBE3BQ7Z3V4 1068 aa14.02□□□□□ -0.17
TRIM59-206ENST00000494486 LPAR1Q92633 364 aa14.02□□□□□ -0.17
TRIM59-206ENST00000494486 PDLIM7Q9NR12 457 aa14.02□□□□□ -0.17
TRIM59-206ENST00000494486 MAP3K2Q9Y2U5 619 aa14.02□□□□□ -0.17
TRIM59-206ENST00000494486 DOCK3Q8IZD9 2030 aa14.02□□□□□ -0.17
TRIM59-206ENST00000494486 CACNA1AO00555 2505 aa14.01□□□□□ -0.17
TRIM59-206ENST00000494486 TRIM43BA6NCK2 446 aa14.01□□□□□ -0.17
TRIM59-206ENST00000494486 TRIM75PA6NK02 468 aa14.01□□□□□ -0.17
TRIM59-206ENST00000494486 PHF20L1A8MW92 1017 aa14.01□□□□□ -0.17
TRIM59-206ENST00000494486 NHLH1Q02575 133 aa14.01□□□□□ -0.17
TRIM59-206ENST00000494486 NEXNQ0ZGT2 675 aa14.01□□□□□ -0.17
TRIM59-206ENST00000494486 ADGRE1Q14246 886 aa14.01□□□□□ -0.17
TRIM59-206ENST00000494486 HHIPL2Q6UWX4 724 aa14.01□□□□□ -0.17
TRIM59-206ENST00000494486 PROCA1Q8NCQ7 364 aaPredicted RBP14.01□□□□□ -0.17
TRIM59-206ENST00000494486 TRIM43Q96BQ3 446 aaPredicted RBP14.01□□□□□ -0.17
TRIM59-206ENST00000494486 MORF4L1Q9UBU8 362 aa14.01□□□□□ -0.17
TRIM59-206ENST00000494486 MAST3O60307 1309 aa14□□□□□ -0.17
TRIM59-206ENST00000494486 FAM86C2PA6NEL3 165 aa14□□□□□ -0.17
TRIM59-206ENST00000494486 TMPOP42166 694 aaKnown RBP14□□□□□ -0.17
TRIM59-206ENST00000494486 GYG1P46976 350 aa14□□□□□ -0.17
TRIM59-206ENST00000494486 EPHB4P54760 987 aa14□□□□□ -0.17
TRIM59-206ENST00000494486 SNX17Q15036 470 aa14□□□□□ -0.17
TRIM59-206ENST00000494486 TREML2Q5T2D2 321 aa14□□□□□ -0.17
TRIM59-206ENST00000494486 FAM84BQ96KN1 310 aaPredicted RBP14□□□□□ -0.17
TRIM59-206ENST00000494486 KCNH6Q9H252 994 aa14□□□□□ -0.17
TRIM59-206ENST00000494486 DDX20Q9UHI6 824 aaKnown RBP14□□□□□ -0.17
TRIM59-206ENST00000494486 PRR33A8MZF0 331 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 PI4K2BG5E9Z4 385 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 PLIN1O60240 522 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 RGS2P41220 211 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 KCNQ1P51787 676 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 TFF2Q03403 129 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 TCP10Q12799 353 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 IFIT5Q13325 482 aaKnown RBP13.99□□□□□ -0.17
TRIM59-206ENST00000494486 UBE4AQ14139 1066 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 TRIM60Q495X7 471 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 KSR2Q6VAB6 950 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 SH3RF1Q7Z6J0 888 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 ARRDC4Q8NCT1 418 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 USP6NLQ92738 828 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 SUGT1Q9Y2Z0 365 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 TACC3Q9Y6A5 838 aa13.99□□□□□ -0.17
TRIM59-206ENST00000494486 NEURL1BA8MQ27 555 aa13.98□□□□□ -0.17
TRIM59-206ENST00000494486 ERC2O15083 957 aa13.98□□□□□ -0.17
TRIM59-206ENST00000494486 CTNND1O60716 968 aaKnown RBP13.98□□□□□ -0.17
TRIM59-206ENST00000494486 CCL14Q16627 93 aa13.98□□□□□ -0.17
TRIM59-206ENST00000494486 CWF19L2Q2TBE0 894 aaKnown RBP13.98□□□□□ -0.17
TRIM59-206ENST00000494486 C1orf53Q5VUE5 145 aa13.98□□□□□ -0.17
TRIM59-206ENST00000494486 LRRFIP2Q9Y608 721 aaKnown RBP13.98□□□□□ -0.17
TRIM59-206ENST00000494486 MYBBP1AQ9BQG0 1328 aaKnown RBP13.97□□□□□ -0.17
TRIM59-206ENST00000494486 MAPK4P31152 587 aa13.97□□□□□ -0.17
TRIM59-206ENST00000494486 FPGSQ05932 587 aa13.97□□□□□ -0.17
TRIM59-206ENST00000494486 CHAF1AQ13111 956 aaPredicted RBP13.97□□□□□ -0.17
TRIM59-206ENST00000494486 MFSD14CQ5VZR4 134 aa13.97□□□□□ -0.17
TRIM59-206ENST00000494486 APBA2Q99767 749 aa13.97□□□□□ -0.17
TRIM59-206ENST00000494486 PBX4Q9BYU1 374 aa13.97□□□□□ -0.17
TRIM59-206ENST00000494486 ASCC2Q9H1I8 757 aaPredicted RBP13.97□□□□□ -0.17
TRIM59-206ENST00000494486 PI4KAP2A4QPH2 592 aa13.96□□□□□ -0.17
TRIM59-206ENST00000494486 KBTBD13C9JR72 458 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms