RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 SSH3Q8TE77 659 aa11.94□□□□□ -0.5
LINC02008-202ENST00000494340 HMG20BQ9P0W2 317 aa11.94□□□□□ -0.5
LINC02008-202ENST00000494340 DOCK1Q14185 1865 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 MAST2Q6P0Q8 1798 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 PHF20L1A8MW92 1017 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 SLC34A2O95436 690 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 RHBDL3P58872 404 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 LACTBP83111 547 aaPredicted RBP11.93□□□□□ -0.5
LINC02008-202ENST00000494340 ATP8B2P98198 1209 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 MECOMQ03112 1051 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 GORABQ5T7V8 394 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 C17orf99Q6UX52 265 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 NBPF11Q86T75 865 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 NSUN4Q96CB9 384 aaKnown RBP11.93□□□□□ -0.5
LINC02008-202ENST00000494340 ZNF512BQ96KM6 892 aaPredicted RBP11.93□□□□□ -0.5
LINC02008-202ENST00000494340 NEUROD6Q96NK8 337 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 SLC45A1Q9Y2W3 748 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 CENPFP49454 3210 aa11.93□□□□□ -0.5
LINC02008-202ENST00000494340 ADGRA2Q96PE1 1338 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 CTNND1O60716 968 aaKnown RBP11.92□□□□□ -0.5
LINC02008-202ENST00000494340 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC02008-202ENST00000494340 CAP1Q01518 475 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 MOGSQ13724 837 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 SH3BP5LQ7L8J4 393 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 FASTKD5Q7L8L6 764 aaKnown RBP11.92□□□□□ -0.5
LINC02008-202ENST00000494340 ZFPM1Q8IX07 1006 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.92□□□□□ -0.5
LINC02008-202ENST00000494340 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 ZNF333Q96JL9 665 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 PARK7Q99497 189 aaKnown RBP11.92□□□□□ -0.5
LINC02008-202ENST00000494340 TBC1D2Q9BYX2 928 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 PICK1Q9NRD5 415 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 TNNQ9UQP3 1299 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 NOP58Q9Y2X3 529 aaKnown RBP11.92□□□□□ -0.5
LINC02008-202ENST00000494340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.92□□□□□ -0.5
LINC02008-202ENST00000494340 PTPRFP10586 1907 aa11.92□□□□□ -0.5
LINC02008-202ENST00000494340 ZBED9Q6R2W3 1325 aa11.91□□□□□ -0.5
LINC02008-202ENST00000494340 PHIPQ8WWQ0 1821 aa11.91□□□□□ -0.5
LINC02008-202ENST00000494340 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
LINC02008-202ENST00000494340 DDTLA6NHG4 134 aaPredicted RBP11.91□□□□□ -0.5
LINC02008-202ENST00000494340 PDHXO00330 501 aa11.91□□□□□ -0.5
LINC02008-202ENST00000494340 PTPRAP18433 802 aa11.91□□□□□ -0.5
LINC02008-202ENST00000494340 MCAMP43121 646 aa11.91□□□□□ -0.5
LINC02008-202ENST00000494340 TNNI3KQ59H18 835 aa11.91□□□□□ -0.5
LINC02008-202ENST00000494340 CCDC158Q5M9N0 1113 aa11.91□□□□□ -0.5
LINC02008-202ENST00000494340 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
LINC02008-202ENST00000494340 ZSCAN29Q8IWY8 852 aaPredicted RBP11.91□□□□□ -0.5
LINC02008-202ENST00000494340 FTSJ3Q8IY81 847 aaKnown RBP11.91□□□□□ -0.5
LINC02008-202ENST00000494340 ZNF384Q8TF68 577 aa11.91□□□□□ -0.5
LINC02008-202ENST00000494340 DDX4Q9NQI0 724 aaKnown RBP11.91□□□□□ -0.5
LINC02008-202ENST00000494340 FPGT-TNNI3KV9GXZ4 949 aa11.91□□□□□ -0.5
LINC02008-202ENST00000494340 KIAA0100Q14667 2235 aaKnown RBP11.91□□□□□ -0.5
LINC02008-202ENST00000494340 ZBTB7BO15156 539 aaPredicted RBP11.9□□□□□ -0.5
LINC02008-202ENST00000494340 HOXD10P28358 340 aa11.9□□□□□ -0.5
LINC02008-202ENST00000494340 SLC9C1Q4G0N8 1177 aa11.9□□□□□ -0.5
LINC02008-202ENST00000494340 TMED8Q6PL24 325 aaPredicted RBP11.9□□□□□ -0.5
LINC02008-202ENST00000494340 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
LINC02008-202ENST00000494340 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
LINC02008-202ENST00000494340 AFG3L2Q9Y4W6 797 aa11.9□□□□□ -0.5
LINC02008-202ENST00000494340 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
LINC02008-202ENST00000494340 BRCA2P51587 3418 aa11.9□□□□□ -0.5
LINC02008-202ENST00000494340 FOCADQ5VW36 1801 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 BAG3O95817 575 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 BCRP11274 1271 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 PLCG2P16885 1265 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 PICALMQ13492 652 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 TTC39AQ5SRH9 613 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 DIEXFQ68CQ4 756 aaKnown RBP11.89□□□□□ -0.51
LINC02008-202ENST00000494340 GPAT2Q6NUI2 795 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 MIER1Q8N108 512 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 NOL10Q9BSC4 688 aaKnown RBP11.89□□□□□ -0.51
LINC02008-202ENST00000494340 DHX36Q9H2U1 1008 aaKnown RBP11.89□□□□□ -0.51
LINC02008-202ENST00000494340 RAI14Q9P0K7 980 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 LRP2BPQ9P2M1 347 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
LINC02008-202ENST00000494340 ZHX2Q9Y6X8 837 aa11.89□□□□□ -0.51
LINC02008-202ENST00000494340 SURF6O75683 361 aaKnown RBP11.88□□□□□ -0.51
LINC02008-202ENST00000494340 MS4A1P11836 297 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 PPP4CP60510 307 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 OS9Q13438 667 aaPredicted RBP11.88□□□□□ -0.51
LINC02008-202ENST00000494340 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 CERS3Q8IU89 383 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 ITPRIPQ8IWB1 547 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 SRRDQ9UH36 339 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 CPA4Q9UI42 421 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 MGAMO43451 1857 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 MKI67P46013 3256 aaKnown RBP11.88□□□□□ -0.51
LINC02008-202ENST00000494340 ZSWIM8A7E2V4 1837 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 ATAD5Q96QE3 1844 aa11.88□□□□□ -0.51
LINC02008-202ENST00000494340 LOC285556D6RIA3 1793 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 CAPN2P17655 700 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 PSMC4P43686 418 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
LINC02008-202ENST00000494340 TBC1D9Q6ZT07 1266 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 ERC1Q8IUD2 1116 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 TEX11Q8IYF3 940 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 PROCA1Q8NCQ7 364 aaPredicted RBP11.87□□□□□ -0.51
LINC02008-202ENST00000494340 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 DBNDD2Q9BQY9 259 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms