RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 SH3BP5LQ7L8J4 393 aa26.69■■□□□ 1.86
HPS3-207ENST00000494327 ADGRA1Q86SQ6 560 aa26.69■■□□□ 1.86
HPS3-207ENST00000494327 TEX11Q8IYF3 940 aa26.69■■□□□ 1.86
HPS3-207ENST00000494327 SH3RF3Q8TEJ3 882 aaPredicted RBP26.69■■□□□ 1.86
HPS3-207ENST00000494327 DNAJC2Q99543 621 aaKnown RBP26.69■■□□□ 1.86
HPS3-207ENST00000494327 DCTPP1Q9H773 170 aa26.69■■□□□ 1.86
HPS3-207ENST00000494327 DDTLA6NHG4 134 aaPredicted RBP26.68■■□□□ 1.86
HPS3-207ENST00000494327 OTUD5Q96G74 571 aa26.68■■□□□ 1.86
HPS3-207ENST00000494327 RFX7Q2KHR2 1363 aa26.68■■□□□ 1.86
HPS3-207ENST00000494327 MAP4K4O95819 1239 aaPredicted RBP26.67■■□□□ 1.86
HPS3-207ENST00000494327 INPP5BP32019 993 aa26.67■■□□□ 1.86
HPS3-207ENST00000494327 MAP3K12Q12852 859 aa26.67■■□□□ 1.86
HPS3-207ENST00000494327 MAGEB6Q8N7X4 407 aa26.67■■□□□ 1.86
HPS3-207ENST00000494327 SNCAIPQ9Y6H5 919 aa26.67■■□□□ 1.86
HPS3-207ENST00000494327 TBC1D8O95759 1140 aa26.66■■□□□ 1.86
HPS3-207ENST00000494327 INHBEP58166 350 aa26.66■■□□□ 1.86
HPS3-207ENST00000494327 BOLA2Q9H3K6 86 aa26.66■■□□□ 1.86
HPS3-207ENST00000494327 AK9Q5TCS8 1911 aa26.65■■□□□ 1.86
HPS3-207ENST00000494327 GOLIM4O00461 696 aa26.65■■□□□ 1.86
HPS3-207ENST00000494327 IGSF3O75054 1194 aa26.65■■□□□ 1.86
HPS3-207ENST00000494327 PLCG2P16885 1265 aa26.65■■□□□ 1.86
HPS3-207ENST00000494327 TTF1Q15361 905 aaPredicted RBP26.65■■□□□ 1.86
HPS3-207ENST00000494327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.65■■□□□ 1.86
HPS3-207ENST00000494327 OTOFQ9HC10 1997 aa26.64■■□□□ 1.86
HPS3-207ENST00000494327 SLURP2P0DP57 97 aa26.64■■□□□ 1.86
HPS3-207ENST00000494327 PPP4CP60510 307 aa26.64■■□□□ 1.86
HPS3-207ENST00000494327 DYNLL1P63167 89 aaKnown RBP26.64■■□□□ 1.86
HPS3-207ENST00000494327 IFNL1Q8IU54 200 aa26.64■■□□□ 1.86
HPS3-207ENST00000494327 MIGA1Q8NAN2 632 aa26.64■■□□□ 1.86
HPS3-207ENST00000494327 OSBPL5Q9H0X9 879 aaPredicted RBP26.64■■□□□ 1.86
HPS3-207ENST00000494327 ZNF112Q9UJU3 913 aa26.64■■□□□ 1.86
HPS3-207ENST00000494327 SPDYE5A6NIY4 337 aa26.63■■□□□ 1.85
HPS3-207ENST00000494327 NPM3O75607 178 aaKnown RBP26.63■■□□□ 1.85
HPS3-207ENST00000494327 IFFO2Q5TF58 517 aa26.63■■□□□ 1.85
HPS3-207ENST00000494327 ERO1BQ86YB8 467 aa26.63■■□□□ 1.85
HPS3-207ENST00000494327 TGFBRAP1Q8WUH2 860 aa26.63■■□□□ 1.85
HPS3-207ENST00000494327 EDC3Q96F86 508 aaKnown RBP26.63■■□□□ 1.85
HPS3-207ENST00000494327 ATP5JP18859 108 aa26.62■■□□□ 1.85
HPS3-207ENST00000494327 MAPKAPK5Q8IW41 473 aa26.62■■□□□ 1.85
HPS3-207ENST00000494327 IGF2BP3O00425 579 aaKnown RBP eCLIP26.61■■□□□ 1.85
HPS3-207ENST00000494327 MAST2Q6P0Q8 1798 aa26.61■■□□□ 1.85
HPS3-207ENST00000494327 ATRNL1Q5VV63 1379 aa26.6■■□□□ 1.85
HPS3-207ENST00000494327 MYO5AQ9Y4I1 1855 aaKnown RBP26.6■■□□□ 1.85
HPS3-207ENST00000494327 ALDH1A1P00352 501 aa26.6■■□□□ 1.85
HPS3-207ENST00000494327 GTF2A2P52657 109 aa26.6■■□□□ 1.85
HPS3-207ENST00000494327 SLC9C2Q5TAH2 1124 aa26.6■■□□□ 1.85
HPS3-207ENST00000494327 OTUD7BQ6GQQ9 843 aa26.6■■□□□ 1.85
HPS3-207ENST00000494327 MS4A4AQ96JQ5 239 aa26.6■■□□□ 1.85
HPS3-207ENST00000494327 PAG1Q9NWQ8 432 aa26.6■■□□□ 1.85
HPS3-207ENST00000494327 CCL15-CCL14A0A0B4J2E2 113 aa26.59■■□□□ 1.85
HPS3-207ENST00000494327 FAM196BA6NMK8 535 aa26.59■■□□□ 1.85
HPS3-207ENST00000494327 CCL15Q16663 113 aa26.59■■□□□ 1.85
HPS3-207ENST00000494327 PTPN18Q99952 460 aa26.59■■□□□ 1.85
HPS3-207ENST00000494327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.59■■□□□ 1.85
HPS3-207ENST00000494327 SUPT16HQ9Y5B9 1047 aaKnown RBP26.59■■□□□ 1.85
HPS3-207ENST00000494327 TESPA1A2RU30 521 aaPredicted RBP26.58■■□□□ 1.85
HPS3-207ENST00000494327 PHF20L1A8MW92 1017 aa26.58■■□□□ 1.85
HPS3-207ENST00000494327 IRF6O14896 467 aa26.58■■□□□ 1.85
HPS3-207ENST00000494327 MAP3K10Q02779 954 aa26.58■■□□□ 1.85
HPS3-207ENST00000494327 PPATQ06203 517 aa26.58■■□□□ 1.85
HPS3-207ENST00000494327 HAUS7Q99871 368 aa26.58■■□□□ 1.85
HPS3-207ENST00000494327 R3HDMLQ9H3Y0 253 aa26.58■■□□□ 1.85
HPS3-207ENST00000494327 ECHDC1Q9NTX5 307 aa26.58■■□□□ 1.85
HPS3-207ENST00000494327 PDE6AP16499 860 aa26.57■■□□□ 1.84
HPS3-207ENST00000494327 PPIL2Q13356 520 aa26.57■■□□□ 1.84
HPS3-207ENST00000494327 NOL9Q5SY16 702 aaKnown RBP26.57■■□□□ 1.84
HPS3-207ENST00000494327 BRI3BPQ8WY22 251 aa26.57■■□□□ 1.84
HPS3-207ENST00000494327 FLT1P17948 1338 aa26.57■■□□□ 1.84
HPS3-207ENST00000494327 CAPN15O75808 1086 aa26.56■■□□□ 1.84
HPS3-207ENST00000494327 USP5P45974 858 aa26.56■■□□□ 1.84
HPS3-207ENST00000494327 SNAPC2Q13487 334 aa26.56■■□□□ 1.84
HPS3-207ENST00000494327 TMED8Q6PL24 325 aaPredicted RBP26.56■■□□□ 1.84
HPS3-207ENST00000494327 SCYL3Q8IZE3 742 aa26.56■■□□□ 1.84
HPS3-207ENST00000494327 GPATCH3Q96I76 525 aa26.56■■□□□ 1.84
HPS3-207ENST00000494327 PICK1Q9NRD5 415 aa26.56■■□□□ 1.84
HPS3-207ENST00000494327 SAP30BPQ9UHR5 308 aaKnown RBP26.56■■□□□ 1.84
HPS3-207ENST00000494327 ZNF532Q9HCE3 1301 aa26.56■■□□□ 1.84
HPS3-207ENST00000494327 MAGEB6P1A0A0J9YX57 407 aa26.55■■□□□ 1.84
HPS3-207ENST00000494327 GPR25O00155 361 aa26.55■■□□□ 1.84
HPS3-207ENST00000494327 TBC1D12O60347 775 aa26.55■■□□□ 1.84
HPS3-207ENST00000494327 CETPP11597 493 aa26.55■■□□□ 1.84
HPS3-207ENST00000494327 TSHZ3Q63HK5 1081 aa26.55■■□□□ 1.84
HPS3-207ENST00000494327 CERS3Q8IU89 383 aa26.55■■□□□ 1.84
HPS3-207ENST00000494327 DHX36Q9H2U1 1008 aaKnown RBP26.55■■□□□ 1.84
HPS3-207ENST00000494327 PALD1Q9ULE6 856 aa26.55■■□□□ 1.84
HPS3-207ENST00000494327 DOCK2Q92608 1830 aa26.55■■□□□ 1.84
HPS3-207ENST00000494327 CASP8AP2Q9UKL3 1982 aa26.55■■□□□ 1.84
HPS3-207ENST00000494327 DGKZQ13574 1117 aa26.54■■□□□ 1.84
HPS3-207ENST00000494327 SLC4A8Q2Y0W8 1093 aa26.54■■□□□ 1.84
HPS3-207ENST00000494327 EXOC6Q8TAG9 804 aa26.54■■□□□ 1.84
HPS3-207ENST00000494327 ZNF296Q8WUU4 475 aaPredicted RBP26.54■■□□□ 1.84
HPS3-207ENST00000494327 PI4KBQ9UBF8 816 aa26.54■■□□□ 1.84
HPS3-207ENST00000494327 ZBTB47Q9UFB7 747 aaPredicted RBP26.54■■□□□ 1.84
HPS3-207ENST00000494327 COL2A1P02458 1487 aaPredicted RBP26.54■■□□□ 1.84
HPS3-207ENST00000494327 CTNND1O60716 968 aaKnown RBP26.53■■□□□ 1.84
HPS3-207ENST00000494327 CFHR5Q9BXR6 569 aa26.53■■□□□ 1.84
HPS3-207ENST00000494327 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.53■■□□□ 1.84
HPS3-207ENST00000494327 ZHX2Q9Y6X8 837 aa26.53■■□□□ 1.84
HPS3-207ENST00000494327 SLFNL1Q499Z3 407 aa26.52■■□□□ 1.84
HPS3-207ENST00000494327 ANKRD45Q5TZF3 282 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms