RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 IL1RAPL2Q9NP60 686 aa15.52■□□□□ 0.08
HSPG2-212ENST00000493940 PIH1D3Q9NQM4 214 aaKnown RBP15.52■□□□□ 0.08
HSPG2-212ENST00000493940 ZNF112Q9UJU3 913 aa15.52■□□□□ 0.08
HSPG2-212ENST00000493940 DOCK1Q14185 1865 aa15.51■□□□□ 0.07
HSPG2-212ENST00000493940 PHF20L1A8MW92 1017 aa15.51■□□□□ 0.07
HSPG2-212ENST00000493940 UQCRFS1P1P0C7P4 283 aa15.51■□□□□ 0.07
HSPG2-212ENST00000493940 TTC39AQ5SRH9 613 aa15.51■□□□□ 0.07
HSPG2-212ENST00000493940 SPTY2D1Q68D10 685 aaPredicted RBP15.51■□□□□ 0.07
HSPG2-212ENST00000493940 CTU1Q7Z7A3 348 aaKnown RBP15.51■□□□□ 0.07
HSPG2-212ENST00000493940 SPDYE5A6NIY4 337 aa15.5■□□□□ 0.07
HSPG2-212ENST00000493940 IRF6O14896 467 aa15.5■□□□□ 0.07
HSPG2-212ENST00000493940 INHBEP58166 350 aa15.5■□□□□ 0.07
HSPG2-212ENST00000493940 FAM43AQ8N2R8 423 aa15.5■□□□□ 0.07
HSPG2-212ENST00000493940 ZNF341Q9BYN7 854 aa15.5■□□□□ 0.07
HSPG2-212ENST00000493940 ANTXR1Q9H6X2 564 aa15.5■□□□□ 0.07
HSPG2-212ENST00000493940 RAI14Q9P0K7 980 aa15.5■□□□□ 0.07
HSPG2-212ENST00000493940 APBB1O00213 710 aa15.49■□□□□ 0.07
HSPG2-212ENST00000493940 SOX10P56693 466 aa15.49■□□□□ 0.07
HSPG2-212ENST00000493940 MAP3K10Q02779 954 aa15.49■□□□□ 0.07
HSPG2-212ENST00000493940 CRHR2Q13324 411 aa15.49■□□□□ 0.07
HSPG2-212ENST00000493940 PICALMQ13492 652 aa15.49■□□□□ 0.07
HSPG2-212ENST00000493940 RHPN1Q8TCX5 695 aa15.49■□□□□ 0.07
HSPG2-212ENST00000493940 SH3RF3Q8TEJ3 882 aaPredicted RBP15.49■□□□□ 0.07
HSPG2-212ENST00000493940 ZNF512BQ96KM6 892 aaPredicted RBP15.49■□□□□ 0.07
HSPG2-212ENST00000493940 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.49■□□□□ 0.07
HSPG2-212ENST00000493940 DDX19BQ9UMR2 479 aa15.49■□□□□ 0.07
HSPG2-212ENST00000493940 CSADQ9Y600 493 aa15.49■□□□□ 0.07
HSPG2-212ENST00000493940 MYH7P12883 1935 aa15.49■□□□□ 0.07
HSPG2-212ENST00000493940 DOCK3Q8IZD9 2030 aa15.48■□□□□ 0.07
HSPG2-212ENST00000493940 FAM196BA6NMK8 535 aa15.48■□□□□ 0.07
HSPG2-212ENST00000493940 ENTPD3O75355 529 aa15.48■□□□□ 0.07
HSPG2-212ENST00000493940 MOGSQ13724 837 aa15.48■□□□□ 0.07
HSPG2-212ENST00000493940 CCDC158Q5M9N0 1113 aa15.48■□□□□ 0.07
HSPG2-212ENST00000493940 RPAP2Q8IXW5 612 aaPredicted RBP15.48■□□□□ 0.07
HSPG2-212ENST00000493940 LRP2BPQ9P2M1 347 aa15.48■□□□□ 0.07
HSPG2-212ENST00000493940 BRCA2P51587 3418 aa15.47■□□□□ 0.07
HSPG2-212ENST00000493940 CCL15-CCL14A0A0B4J2E2 113 aa15.47■□□□□ 0.07
HSPG2-212ENST00000493940 MS4A1P11836 297 aa15.47■□□□□ 0.07
HSPG2-212ENST00000493940 DYNLL1P63167 89 aaKnown RBP15.47■□□□□ 0.07
HSPG2-212ENST00000493940 RRP1BQ14684 758 aaKnown RBP15.47■□□□□ 0.07
HSPG2-212ENST00000493940 CCL15Q16663 113 aa15.47■□□□□ 0.07
HSPG2-212ENST00000493940 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
HSPG2-212ENST00000493940 DCAF15Q66K64 600 aa15.47■□□□□ 0.07
HSPG2-212ENST00000493940 AACSQ86V21 672 aa15.47■□□□□ 0.07
HSPG2-212ENST00000493940 ERO1BQ86YB8 467 aa15.47■□□□□ 0.07
HSPG2-212ENST00000493940 MGAMO43451 1857 aa15.46■□□□□ 0.07
HSPG2-212ENST00000493940 FKTNO75072 461 aa15.46■□□□□ 0.07
HSPG2-212ENST00000493940 PDE3AQ14432 1141 aa15.46■□□□□ 0.07
HSPG2-212ENST00000493940 PKN2Q16513 984 aaKnown RBP15.46■□□□□ 0.07
HSPG2-212ENST00000493940 CCDC84Q86UT8 332 aaPredicted RBP15.46■□□□□ 0.07
HSPG2-212ENST00000493940 SLF2Q8IX21 1173 aa15.46■□□□□ 0.07
HSPG2-212ENST00000493940 AATFQ9NY61 560 aaKnown RBP eCLIP15.46■□□□□ 0.07
HSPG2-212ENST00000493940 HPS5Q9UPZ3 1129 aa15.46■□□□□ 0.07
HSPG2-212ENST00000493940 BTBD19C9JJ37 291 aa15.45■□□□□ 0.06
HSPG2-212ENST00000493940 ALDH1A1P00352 501 aa15.45■□□□□ 0.06
HSPG2-212ENST00000493940 GTF2A2P52657 109 aa15.45■□□□□ 0.06
HSPG2-212ENST00000493940 PPIL2Q13356 520 aa15.45■□□□□ 0.06
HSPG2-212ENST00000493940 NOL9Q5SY16 702 aaKnown RBP15.45■□□□□ 0.06
HSPG2-212ENST00000493940 ZSCAN29Q8IWY8 852 aaPredicted RBP15.45■□□□□ 0.06
HSPG2-212ENST00000493940 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.45■□□□□ 0.06
HSPG2-212ENST00000493940 EDC3Q96F86 508 aaKnown RBP15.45■□□□□ 0.06
HSPG2-212ENST00000493940 BCL11AQ9H165 835 aa15.45■□□□□ 0.06
HSPG2-212ENST00000493940 BAZ2AQ9UIF9 1905 aaKnown RBP15.45■□□□□ 0.06
HSPG2-212ENST00000493940 SMARCA5O60264 1052 aaPredicted RBP15.44■□□□□ 0.06
HSPG2-212ENST00000493940 LDHCP07864 332 aa15.44■□□□□ 0.06
HSPG2-212ENST00000493940 PPP4CP60510 307 aa15.44■□□□□ 0.06
HSPG2-212ENST00000493940 GSTO1P78417 241 aa15.44■□□□□ 0.06
HSPG2-212ENST00000493940 JAG1P78504 1218 aa15.44■□□□□ 0.06
HSPG2-212ENST00000493940 PPATQ06203 517 aa15.44■□□□□ 0.06
HSPG2-212ENST00000493940 NAA16Q6N069 864 aaPredicted RBP15.44■□□□□ 0.06
HSPG2-212ENST00000493940 TEX11Q8IYF3 940 aa15.44■□□□□ 0.06
HSPG2-212ENST00000493940 HOOK2Q96ED9 719 aa15.44■□□□□ 0.06
HSPG2-212ENST00000493940 OSBPL5Q9H0X9 879 aaPredicted RBP15.44■□□□□ 0.06
HSPG2-212ENST00000493940 KCNH4Q9UQ05 1017 aa15.44■□□□□ 0.06
HSPG2-212ENST00000493940 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
HSPG2-212ENST00000493940 SHROOM1Q2M3G4 852 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-212ENST00000493940 SLFNL1Q499Z3 407 aa15.43■□□□□ 0.06
HSPG2-212ENST00000493940 PRPF38BQ5VTL8 546 aaKnown RBP15.43■□□□□ 0.06
HSPG2-212ENST00000493940 ERC1Q8IUD2 1116 aa15.43■□□□□ 0.06
HSPG2-212ENST00000493940 CD99L2Q8TCZ2 262 aa15.43■□□□□ 0.06
HSPG2-212ENST00000493940 TGFBRAP1Q8WUH2 860 aa15.43■□□□□ 0.06
HSPG2-212ENST00000493940 KIAA0100Q14667 2235 aaKnown RBP15.42■□□□□ 0.06
HSPG2-212ENST00000493940 CHGBP05060 677 aa15.42■□□□□ 0.06
HSPG2-212ENST00000493940 PTPRAP18433 802 aa15.42■□□□□ 0.06
HSPG2-212ENST00000493940 GPAT2Q6NUI2 795 aa15.42■□□□□ 0.06
HSPG2-212ENST00000493940 OTOP1Q7RTM1 612 aa15.42■□□□□ 0.06
HSPG2-212ENST00000493940 MAPKAPK5Q8IW41 473 aa15.42■□□□□ 0.06
HSPG2-212ENST00000493940 KIF1BPQ96EK5 621 aa15.42■□□□□ 0.06
HSPG2-212ENST00000493940 DNAJC18Q9H819 358 aa15.42■□□□□ 0.06
HSPG2-212ENST00000493940 DDX60LQ5H9U9 1706 aaKnown RBP15.41■□□□□ 0.06
HSPG2-212ENST00000493940 TBC1D12O60347 775 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 IDH1O75874 414 aaKnown RBP15.41■□□□□ 0.06
HSPG2-212ENST00000493940 CETPP11597 493 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 CYP7A1P22680 504 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 EVX2Q03828 476 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 SNAPC2Q13487 334 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 TAF1CQ15572 869 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-212ENST00000493940 HSP90AB4PQ58FF6 505 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 SCYL3Q8IZE3 742 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 MAGEB6Q8N7X4 407 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms