RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PRRT2Q7Z6L0 340 aaPredicted RBP26.73■■□□□ 1.87
PFDN4-205ENST00000493356 ZHX2Q9Y6X8 837 aa26.73■■□□□ 1.87
PFDN4-205ENST00000493356 GAKO14976 1311 aa26.72■■□□□ 1.87
PFDN4-205ENST00000493356 PTPRAP18433 802 aa26.72■■□□□ 1.87
PFDN4-205ENST00000493356 UBXN2AP68543 259 aa26.72■■□□□ 1.87
PFDN4-205ENST00000493356 ALDH1L2Q3SY69 923 aa26.72■■□□□ 1.87
PFDN4-205ENST00000493356 FASTKD5Q7L8L6 764 aaKnown RBP26.72■■□□□ 1.87
PFDN4-205ENST00000493356 SLAIN1Q8ND83 568 aa26.72■■□□□ 1.87
PFDN4-205ENST00000493356 PICK1Q9NRD5 415 aa26.72■■□□□ 1.87
PFDN4-205ENST00000493356 GABRQQ9UN88 632 aa26.72■■□□□ 1.87
PFDN4-205ENST00000493356 DOCK1Q14185 1865 aa26.71■■□□□ 1.87
PFDN4-205ENST00000493356 ZNF316A6NFI3 1004 aaPredicted RBP26.71■■□□□ 1.87
PFDN4-205ENST00000493356 ZBTB22O15209 634 aa26.71■■□□□ 1.87
PFDN4-205ENST00000493356 SLFN5Q08AF3 891 aa26.71■■□□□ 1.87
PFDN4-205ENST00000493356 SH3BP5LQ7L8J4 393 aa26.71■■□□□ 1.87
PFDN4-205ENST00000493356 AFG3L2Q9Y4W6 797 aa26.71■■□□□ 1.87
PFDN4-205ENST00000493356 PHIPQ8WWQ0 1821 aa26.71■■□□□ 1.87
PFDN4-205ENST00000493356 IL15P40933 162 aaPredicted RBP26.7■■□□□ 1.86
PFDN4-205ENST00000493356 MAP3K10Q02779 954 aa26.7■■□□□ 1.86
PFDN4-205ENST00000493356 ZGPATQ8N5A5 531 aaKnown RBP26.7■■□□□ 1.86
PFDN4-205ENST00000493356 HTATIP2Q9BUP3 242 aa26.7■■□□□ 1.86
PFDN4-205ENST00000493356 SMC4Q9NTJ3 1288 aa26.7■■□□□ 1.86
PFDN4-205ENST00000493356 RBM27Q9P2N5 1060 aaKnown RBP26.7■■□□□ 1.86
PFDN4-205ENST00000493356 ADORA1P30542 326 aa26.69■■□□□ 1.86
PFDN4-205ENST00000493356 CCDC102BQ68D86 513 aa26.69■■□□□ 1.86
PFDN4-205ENST00000493356 GADL1Q6ZQY3 521 aa26.69■■□□□ 1.86
PFDN4-205ENST00000493356 ZSCAN29Q8IWY8 852 aaPredicted RBP26.69■■□□□ 1.86
PFDN4-205ENST00000493356 U2AF1L4Q8WU68 220 aaKnown RBP26.69■■□□□ 1.86
PFDN4-205ENST00000493356 PA2G4Q9UQ80 394 aaKnown RBP26.69■■□□□ 1.86
PFDN4-205ENST00000493356 SLURP2P0DP57 97 aa26.68■■□□□ 1.86
PFDN4-205ENST00000493356 UNC93B1Q9H1C4 597 aa26.68■■□□□ 1.86
PFDN4-205ENST00000493356 SLC45A1Q9Y2W3 748 aa26.68■■□□□ 1.86
PFDN4-205ENST00000493356 LRRFIP2Q9Y608 721 aaKnown RBP26.68■■□□□ 1.86
PFDN4-205ENST00000493356 DDTLA6NHG4 134 aaPredicted RBP26.67■■□□□ 1.86
PFDN4-205ENST00000493356 RASGRF1Q13972 1273 aa26.67■■□□□ 1.86
PFDN4-205ENST00000493356 DZIP1Q86YF9 867 aaKnown RBP26.67■■□□□ 1.86
PFDN4-205ENST00000493356 DDX4Q9NQI0 724 aaKnown RBP26.67■■□□□ 1.86
PFDN4-205ENST00000493356 ADCY3O60266 1144 aa26.66■■□□□ 1.86
PFDN4-205ENST00000493356 CTNND1O60716 968 aaKnown RBP26.66■■□□□ 1.86
PFDN4-205ENST00000493356 FARP2O94887 1054 aaPredicted RBP26.66■■□□□ 1.86
PFDN4-205ENST00000493356 FLT3LGP49771 235 aa26.66■■□□□ 1.86
PFDN4-205ENST00000493356 FAM163AQ96GL9 167 aaPredicted RBP26.66■■□□□ 1.86
PFDN4-205ENST00000493356 COPRSQ9NQ92 184 aa26.66■■□□□ 1.86
PFDN4-205ENST00000493356 ABCF2Q9UG63 623 aa26.66■■□□□ 1.86
PFDN4-205ENST00000493356 PDS5AQ29RF7 1337 aaKnown RBP26.65■■□□□ 1.86
PFDN4-205ENST00000493356 SGPL1O95470 568 aa26.65■■□□□ 1.86
PFDN4-205ENST00000493356 SLF2Q8IX21 1173 aa26.65■■□□□ 1.86
PFDN4-205ENST00000493356 PRO3102Q9H379 93 aa26.65■■□□□ 1.86
PFDN4-205ENST00000493356 TRIM75PA6NK02 468 aa26.64■■□□□ 1.86
PFDN4-205ENST00000493356 ELNP15502 786 aa26.64■■□□□ 1.86
PFDN4-205ENST00000493356 BTDP43251 543 aa26.64■■□□□ 1.86
PFDN4-205ENST00000493356 PICALMQ13492 652 aa26.64■■□□□ 1.86
PFDN4-205ENST00000493356 SMCR8Q8TEV9 937 aaPredicted RBP26.64■■□□□ 1.86
PFDN4-205ENST00000493356 CDCA7LQ96GN5 454 aa26.64■■□□□ 1.86
PFDN4-205ENST00000493356 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.64■■□□□ 1.86
PFDN4-205ENST00000493356 NR2E3Q9Y5X4 410 aa26.64■■□□□ 1.86
PFDN4-205ENST00000493356 DOCK3Q8IZD9 2030 aa26.63■■□□□ 1.85
PFDN4-205ENST00000493356 TNPO2O14787 897 aaKnown RBP26.63■■□□□ 1.85
PFDN4-205ENST00000493356 INHAP05111 366 aa26.63■■□□□ 1.85
PFDN4-205ENST00000493356 TIMM10P62072 90 aa26.63■■□□□ 1.85
PFDN4-205ENST00000493356 IRF5Q13568 498 aa26.63■■□□□ 1.85
PFDN4-205ENST00000493356 PXYLP1Q8TE99 480 aa26.63■■□□□ 1.85
PFDN4-205ENST00000493356 HDAC5Q9UQL6 1122 aa26.63■■□□□ 1.85
PFDN4-205ENST00000493356 MROH7-TTC4A0A0A0MT08 1334 aa26.63■■□□□ 1.85
PFDN4-205ENST00000493356 SPTY2D1Q68D10 685 aaPredicted RBP26.62■■□□□ 1.85
PFDN4-205ENST00000493356 CCDC84Q86UT8 332 aaPredicted RBP26.62■■□□□ 1.85
PFDN4-205ENST00000493356 NOB1Q9ULX3 412 aaKnown RBP26.62■■□□□ 1.85
PFDN4-205ENST00000493356 AGTPBP1Q9UPW5 1226 aa26.62■■□□□ 1.85
PFDN4-205ENST00000493356 ZBTB7BO15156 539 aaPredicted RBP26.61■■□□□ 1.85
PFDN4-205ENST00000493356 RHBDL3P58872 404 aa26.6■■□□□ 1.85
PFDN4-205ENST00000493356 MEIS3Q99687 375 aa26.6■■□□□ 1.85
PFDN4-205ENST00000493356 API5Q9BZZ5 524 aaKnown RBP26.6■■□□□ 1.85
PFDN4-205ENST00000493356 GPR75-ASB3A0A0A6YYF3 556 aa26.59■■□□□ 1.85
PFDN4-205ENST00000493356 A0A1B0GUL7 405 aa26.59■■□□□ 1.85
PFDN4-205ENST00000493356 TBC1D12O60347 775 aa26.59■■□□□ 1.85
PFDN4-205ENST00000493356 MECOMQ03112 1051 aa26.59■■□□□ 1.85
PFDN4-205ENST00000493356 TRMT2AQ8IZ69 625 aaKnown RBP26.59■■□□□ 1.85
PFDN4-205ENST00000493356 ANKRD13CQ8N6S4 541 aa26.59■■□□□ 1.85
PFDN4-205ENST00000493356 ZNF384Q8TF68 577 aa26.59■■□□□ 1.85
PFDN4-205ENST00000493356 XAGE2Q96GT9 111 aa26.59■■□□□ 1.85
PFDN4-205ENST00000493356 DEFB118Q96PH6 123 aa26.59■■□□□ 1.85
PFDN4-205ENST00000493356 CAPN2P17655 700 aa26.58■■□□□ 1.85
PFDN4-205ENST00000493356 TREML2Q5T2D2 321 aa26.58■■□□□ 1.85
PFDN4-205ENST00000493356 ERICH6Q7L0X2 663 aa26.58■■□□□ 1.85
PFDN4-205ENST00000493356 PAK6Q9NQU5 681 aaPredicted RBP26.58■■□□□ 1.85
PFDN4-205ENST00000493356 LOC285556D6RIA3 1793 aa26.58■■□□□ 1.85
PFDN4-205ENST00000493356 FAM196BA6NMK8 535 aa26.57■■□□□ 1.84
PFDN4-205ENST00000493356 NPM3O75607 178 aaKnown RBP26.57■■□□□ 1.84
PFDN4-205ENST00000493356 TFRCP02786 760 aaKnown RBP26.57■■□□□ 1.84
PFDN4-205ENST00000493356 TFCP2Q12800 502 aa26.57■■□□□ 1.84
PFDN4-205ENST00000493356 MVPQ14764 893 aaKnown RBP26.57■■□□□ 1.84
PFDN4-205ENST00000493356 FAM110CQ1W6H9 321 aa26.57■■□□□ 1.84
PFDN4-205ENST00000493356 COA7Q96BR5 231 aa26.57■■□□□ 1.84
PFDN4-205ENST00000493356 PNMA3Q9UL41 463 aa26.57■■□□□ 1.84
PFDN4-205ENST00000493356 TAOK2Q9UL54 1235 aa26.57■■□□□ 1.84
PFDN4-205ENST00000493356 AKAP2Q9Y2D5 859 aa26.57■■□□□ 1.84
PFDN4-205ENST00000493356 ATAD5Q96QE3 1844 aa26.57■■□□□ 1.84
PFDN4-205ENST00000493356 CT47B1P0C2W7 299 aaPredicted RBP26.56■■□□□ 1.84
PFDN4-205ENST00000493356 PROCA1Q8NCQ7 364 aaPredicted RBP26.56■■□□□ 1.84
PFDN4-205ENST00000493356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms