RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 DOCK1Q14185 1865 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 SEMA3EO15041 775 aa10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 SGSM2O43147 1006 aa10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 UQCRFS1P1P0C7P4 283 aa10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 PTH1RQ03431 593 aa10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 CCDC158Q5M9N0 1113 aa10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 ZMYM1Q5SVZ6 1142 aa10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 FKBP1CQ5VVH2 108 aa10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 WDR66Q8TBY9 1149 aa10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 OSBP2Q969R2 916 aa10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 LSG1Q9H089 658 aaKnown RBP10.97□□□□□ -0.65
TM4SF1-203ENST00000493298 TRIM6-TRIM34B2RNG4 842 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 M0R2C6 588 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 TM4SF4P48230 202 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 NFIAQ12857 509 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 SPRYD7Q5W111 196 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 CCDC129Q6ZRS4 1044 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 VPS37DQ86XT2 251 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 TEKT1Q969V4 418 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 USP26Q9BXU7 913 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 R3HDMLQ9H3Y0 253 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 SAGE1Q9NXZ1 904 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 ZBTB47Q9UFB7 747 aaPredicted RBP10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 FAM198AQ9UFP1 575 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 TAF6LQ9Y6J9 622 aa10.96□□□□□ -0.65
TM4SF1-203ENST00000493298 PDE4DIPQ5VU43 2346 aa10.96□□□□□ -0.66
TM4SF1-203ENST00000493298 MYH1P12882 1939 aa10.96□□□□□ -0.66
TM4SF1-203ENST00000493298 TCP10L2B9ZVM9 353 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 RNF113AO15541 343 aaKnown RBP10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 CA12O43570 354 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 ADD2P35612 726 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 CAP1Q01518 475 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 PRKG1Q13976 671 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 VPS53Q5VIR6 699 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 CDC42EP5Q6NZY7 148 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 SH3BP5LQ7L8J4 393 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 FAM83AQ86UY5 434 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 ZFPM1Q8IX07 1006 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 TNS4Q8IZW8 715 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.95□□□□□ -0.661e-12■□□□□ 8.4
TM4SF1-203ENST00000493298 NKX2-3Q8TAU0 364 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 FAM163AQ96GL9 167 aaPredicted RBP10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 CFHR5Q9BXR6 569 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 PUS7LQ9H0K6 701 aaKnown RBP10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 VEZTQ9HBM0 779 aa10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 ANGEL1Q9UNK9 670 aaKnown RBP10.95□□□□□ -0.66
TM4SF1-203ENST00000493298 DOCK3Q8IZD9 2030 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 MAST3O60307 1309 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 UNCXA6NJT0 531 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 MYO1BO43795 1136 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 PDE6AP16499 860 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 RBM5P52756 815 aaKnown RBP eCLIP10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 RHBDL3P58872 404 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 GORABQ5T7V8 394 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 CNKSR2Q8WXI2 1034 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 GPATCH3Q96I76 525 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 WNK4Q96J92 1243 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 MS4A4AQ96JQ5 239 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 PTPN18Q99952 460 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 DENND2AQ9ULE3 1009 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 PALD1Q9ULE6 856 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 TACC3Q9Y6A5 838 aa10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 KIAA0100Q14667 2235 aaKnown RBP10.94□□□□□ -0.66
TM4SF1-203ENST00000493298 MGAMO43451 1857 aa10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 LOC285556D6RIA3 1793 aa10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 TESPA1A2RU30 521 aaPredicted RBP10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 SMIM22K7EJ46 135 aa10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 IGF2BP3O00425 579 aaKnown RBP eCLIP10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 WDHD1O75717 1129 aaPredicted RBP10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 SLURP2P0DP57 97 aa10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 MAP3K10Q02779 954 aa10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 CWC27Q6UX04 472 aaKnown RBP10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 KCNB2Q92953 911 aa10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 NSUN4Q96CB9 384 aaKnown RBP10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 IL17RAQ96F46 866 aa10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 DDX4Q9NQI0 724 aaKnown RBP10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 RBBP6Q7Z6E9 1792 aaKnown RBP10.93□□□□□ -0.66
TM4SF1-203ENST00000493298 ZNF532Q9HCE3 1301 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 TRPA1O75762 1119 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 LDHBP07195 334 aaKnown RBP10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 ZBTB48P10074 688 aaPredicted RBP10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 MECOMQ03112 1051 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 TNFAIP1Q13829 316 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 VGLL4Q14135 290 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 UBE3CQ15386 1083 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 SUPT20HL1Q3ZLR7 823 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 ARMC9Q7Z3E5 817 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 RIOK1Q9BRS2 568 aaKnown RBP10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 IDI2Q9BXS1 227 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 ZNF112Q9UJU3 913 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 RBM19Q9Y4C8 960 aaKnown RBP10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 SNCAIPQ9Y6H5 919 aa10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 COL2A1P02458 1487 aaPredicted RBP10.92□□□□□ -0.66
TM4SF1-203ENST00000493298 GPR75-ASB3A0A0A6YYF3 556 aa10.91□□□□□ -0.66
TM4SF1-203ENST00000493298 FRAT2O75474 233 aaPredicted RBP10.91□□□□□ -0.66
TM4SF1-203ENST00000493298 NF2P35240 595 aa10.91□□□□□ -0.66
TM4SF1-203ENST00000493298 MFAP1P55081 439 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms