RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ATRNL1Q5VV63 1379 aa13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 TRIOBPQ9H2D6 2365 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 GAKO14976 1311 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 PDS5AQ29RF7 1337 aaKnown RBP13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 PHF20L1A8MW92 1017 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 CTNND1O60716 968 aaKnown RBP13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 CYP2C8P10632 490 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 PTPRAP18433 802 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 IL15P40933 162 aaPredicted RBP13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 ALDH1L2Q3SY69 923 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 ATG9AQ7Z3C6 839 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 PRO3102Q9H379 93 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 PNMA3Q9UL41 463 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 AFG3L2Q9Y4W6 797 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 LRRFIP2Q9Y608 721 aaKnown RBP13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 ZHX2Q9Y6X8 837 aa13.69□□□□□ -0.22
SNRNP200-207ENST00000493271 E9PSI1 815 aa13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 TNPO2O14787 897 aaKnown RBP13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 ADCY3O60266 1144 aa13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 MAP4K4O95819 1239 aaPredicted RBP13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 RGS3P49796 1198 aa13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 SPTY2D1Q68D10 685 aaPredicted RBP13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 FAM163AQ96GL9 167 aaPredicted RBP13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 TBC1D2Q9BYX2 928 aa13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 DOCK2Q92608 1830 aa13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 RFX7Q2KHR2 1363 aa13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 AK9Q5TCS8 1911 aa13.68□□□□□ -0.22
SNRNP200-207ENST00000493271 RANBP2P49792 3224 aaKnown RBP13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 ZBTB7BO15156 539 aaPredicted RBP13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 UBTFL1P0CB47 393 aaPredicted RBP13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 FLT3LGP49771 235 aa13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 DZIP1Q86YF9 867 aaKnown RBP13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 ZSCAN29Q8IWY8 852 aaPredicted RBP13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 FAM9BQ8IZU0 186 aa13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 SSH1Q8WYL5 1049 aa13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 COA7Q96BR5 231 aa13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 UNC93B1Q9H1C4 597 aa13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 SZT2Q5T011 3432 aa13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 MGAMO43451 1857 aa13.67□□□□□ -0.22
SNRNP200-207ENST00000493271 TBC1D12O60347 775 aa13.66□□□□□ -0.22
SNRNP200-207ENST00000493271 EVI5O60447 810 aa13.66□□□□□ -0.22
SNRNP200-207ENST00000493271 INHAP05111 366 aa13.66□□□□□ -0.22
SNRNP200-207ENST00000493271 FAM110CQ1W6H9 321 aa13.66□□□□□ -0.22
SNRNP200-207ENST00000493271 GADL1Q6ZQY3 521 aa13.66□□□□□ -0.22
SNRNP200-207ENST00000493271 ANKLE1Q8NAG6 615 aa13.66□□□□□ -0.22
SNRNP200-207ENST00000493271 PAK6Q9NQU5 681 aaPredicted RBP13.66□□□□□ -0.22
SNRNP200-207ENST00000493271 GABRQQ9UN88 632 aa13.66□□□□□ -0.22
SNRNP200-207ENST00000493271 AGTPBP1Q9UPW5 1226 aa13.66□□□□□ -0.22
SNRNP200-207ENST00000493271 TFRCP02786 760 aaKnown RBP13.65□□□□□ -0.22
SNRNP200-207ENST00000493271 PHKA1P46020 1223 aa13.65□□□□□ -0.22
SNRNP200-207ENST00000493271 PABPC4Q13310 644 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNRNP200-207ENST00000493271 CCDC102BQ68D86 513 aa13.65□□□□□ -0.22
SNRNP200-207ENST00000493271 ZFPM1Q8IX07 1006 aa13.65□□□□□ -0.22
SNRNP200-207ENST00000493271 PROCA1Q8NCQ7 364 aaPredicted RBP13.65□□□□□ -0.22
SNRNP200-207ENST00000493271 SIL1Q9H173 461 aa13.65□□□□□ -0.22
SNRNP200-207ENST00000493271 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
SNRNP200-207ENST00000493271 DOCK1Q14185 1865 aa13.64□□□□□ -0.23
SNRNP200-207ENST00000493271 CT47B1P0C2W7 299 aaPredicted RBP13.64□□□□□ -0.23
SNRNP200-207ENST00000493271 GCLCP48506 637 aaPredicted RBP13.64□□□□□ -0.23
SNRNP200-207ENST00000493271 CRISPLD2Q9H0B8 497 aa13.64□□□□□ -0.23
SNRNP200-207ENST00000493271 OSBPL5Q9H0X9 879 aaPredicted RBP13.64□□□□□ -0.23
SNRNP200-207ENST00000493271 AKAP2Q9Y2D5 859 aa13.64□□□□□ -0.23
SNRNP200-207ENST00000493271 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
SNRNP200-207ENST00000493271 COL2A1P02458 1487 aaPredicted RBP13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 MYH2Q9UKX2 1941 aa13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 DDTLA6NHG4 134 aaPredicted RBP13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 RASGRF1Q13972 1273 aa13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 MVPQ14764 893 aaKnown RBP13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 GPR153Q6NV75 609 aa13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 SH3BP5LQ7L8J4 393 aa13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 NECAB2Q7Z6G3 386 aa13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 DEFB118Q96PH6 123 aa13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 ABCF2Q9UG63 623 aa13.63□□□□□ -0.23
SNRNP200-207ENST00000493271 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 HMGCRP04035 888 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 LDHCP07864 332 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 ELNP15502 786 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 BTDP43251 543 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 GSTO1P78417 241 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 ANKRD13CQ8N6S4 541 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 SMC4Q9NTJ3 1288 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 PTPRFP10586 1907 aa13.62□□□□□ -0.23
SNRNP200-207ENST00000493271 BMP8BP34820 402 aa13.61□□□□□ -0.23
SNRNP200-207ENST00000493271 SLFN5Q08AF3 891 aa13.61□□□□□ -0.23
SNRNP200-207ENST00000493271 PICALMQ13492 652 aa13.61□□□□□ -0.23
SNRNP200-207ENST00000493271 ZNF280CQ8ND82 737 aa13.61□□□□□ -0.23
SNRNP200-207ENST00000493271 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNRNP200-207ENST00000493271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNRNP200-207ENST00000493271 AS3MTQ9HBK9 375 aa13.61□□□□□ -0.23
SNRNP200-207ENST00000493271 DDX4Q9NQI0 724 aaKnown RBP13.61□□□□□ -0.23
SNRNP200-207ENST00000493271 PHIPQ8WWQ0 1821 aa13.6□□□□□ -0.23
SNRNP200-207ENST00000493271 RHBDL3P58872 404 aa13.6□□□□□ -0.23
SNRNP200-207ENST00000493271 MECOMQ03112 1051 aa13.6□□□□□ -0.23
SNRNP200-207ENST00000493271 PAWRQ96IZ0 340 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms