RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CSRNP1Q96S65 589 aa16.19■□□□□ 0.18
MSH6-208ENST00000493177 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.19■□□□□ 0.18
MSH6-208ENST00000493177 APOBEC3HQ6NTF7 200 aaKnown RBP16.18■□□□□ 0.18
MSH6-208ENST00000493177 ANKRD13AQ8IZ07 590 aa16.18■□□□□ 0.18
MSH6-208ENST00000493177 RNF186Q9NXI6 227 aa16.18■□□□□ 0.18
MSH6-208ENST00000493177 SAGE1Q9NXZ1 904 aa16.18■□□□□ 0.18
MSH6-208ENST00000493177 DAGLAQ9Y4D2 1042 aa16.18■□□□□ 0.18
MSH6-208ENST00000493177 CDC45O75419 566 aa16.17■□□□□ 0.18
MSH6-208ENST00000493177 USP2O75604 605 aaPredicted RBP16.17■□□□□ 0.18
MSH6-208ENST00000493177 MAP3K11Q16584 847 aa16.17■□□□□ 0.18
MSH6-208ENST00000493177 LDLRAD1Q5T700 205 aa16.17■□□□□ 0.18
MSH6-208ENST00000493177 ZSCAN25Q6NSZ9 544 aa16.17■□□□□ 0.18
MSH6-208ENST00000493177 CASC1Q6TDU7 716 aa16.17■□□□□ 0.18
MSH6-208ENST00000493177 DIAPH3Q9NSV4 1193 aa16.17■□□□□ 0.18
MSH6-208ENST00000493177 USP40Q9NVE5 1235 aa16.17■□□□□ 0.18
MSH6-208ENST00000493177 CSADQ9Y600 493 aa16.17■□□□□ 0.18
MSH6-208ENST00000493177 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
MSH6-208ENST00000493177 HIP1O00291 1037 aa16.16■□□□□ 0.18
MSH6-208ENST00000493177 TCP10Q12799 353 aa16.16■□□□□ 0.18
MSH6-208ENST00000493177 SLC9C2Q5TAH2 1124 aa16.16■□□□□ 0.18
MSH6-208ENST00000493177 SPRYD7Q5W111 196 aa16.16■□□□□ 0.18
MSH6-208ENST00000493177 DCAF15Q66K64 600 aa16.16■□□□□ 0.18
MSH6-208ENST00000493177 FAM83AQ86UY5 434 aa16.16■□□□□ 0.18
MSH6-208ENST00000493177 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
MSH6-208ENST00000493177 CLMNQ96JQ2 1002 aa16.16■□□□□ 0.18
MSH6-208ENST00000493177 NOL10Q9BSC4 688 aaKnown RBP16.16■□□□□ 0.18
MSH6-208ENST00000493177 ELP3Q9H9T3 547 aa16.16■□□□□ 0.18
MSH6-208ENST00000493177 MAST2Q6P0Q8 1798 aa16.15■□□□□ 0.18
MSH6-208ENST00000493177 UNCXA6NJT0 531 aa16.15■□□□□ 0.18
MSH6-208ENST00000493177 RNF113AO15541 343 aaKnown RBP16.15■□□□□ 0.18
MSH6-208ENST00000493177 FKBP1CQ5VVH2 108 aa16.15■□□□□ 0.18
MSH6-208ENST00000493177 CDC42EP5Q6NZY7 148 aa16.15■□□□□ 0.18
MSH6-208ENST00000493177 CDAN1Q8IWY9 1227 aa16.15■□□□□ 0.18
MSH6-208ENST00000493177 WNK4Q96J92 1243 aa16.15■□□□□ 0.18
MSH6-208ENST00000493177 RFX7Q2KHR2 1363 aa16.14■□□□□ 0.17
MSH6-208ENST00000493177 MANSC4A6NHS7 340 aaPredicted RBP16.14■□□□□ 0.17
MSH6-208ENST00000493177 LDHCP07864 332 aa16.14■□□□□ 0.17
MSH6-208ENST00000493177 ZFYP08048 801 aaPredicted RBP16.14■□□□□ 0.17
MSH6-208ENST00000493177 ZBTB48P10074 688 aaPredicted RBP16.14■□□□□ 0.17
MSH6-208ENST00000493177 PDE6AP16499 860 aa16.14■□□□□ 0.17
MSH6-208ENST00000493177 BTDP43251 543 aa16.14■□□□□ 0.17
MSH6-208ENST00000493177 GSTO1P78417 241 aa16.14■□□□□ 0.17
MSH6-208ENST00000493177 NAA16Q6N069 864 aaPredicted RBP16.14■□□□□ 0.17
MSH6-208ENST00000493177 ZSCAN29Q8IWY8 852 aaPredicted RBP16.14■□□□□ 0.17
MSH6-208ENST00000493177 FAM151AQ8WW52 585 aa16.14■□□□□ 0.17
MSH6-208ENST00000493177 TEPSINQ96N21 525 aa16.14■□□□□ 0.17
MSH6-208ENST00000493177 RPAP1Q9BWH6 1393 aaPredicted RBP16.13■□□□□ 0.17
MSH6-208ENST00000493177 CHGBP05060 677 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 CYP7A1P22680 504 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 CHMLP26374 656 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 ADD2P35612 726 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 MAP3K9P80192 1104 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 MECOMQ03112 1051 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
MSH6-208ENST00000493177 PICALMQ13492 652 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 CWC27Q6UX04 472 aaKnown RBP16.13■□□□□ 0.17
MSH6-208ENST00000493177 OPTNQ96CV9 577 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 WRNIP1Q96S55 665 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 MYO5AQ9Y4I1 1855 aaKnown RBP16.13■□□□□ 0.17
MSH6-208ENST00000493177 MROH7-TTC4A0A0A0MT08 1334 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 ZNF532Q9HCE3 1301 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 LAMB1P07942 1786 aa16.13■□□□□ 0.17
MSH6-208ENST00000493177 SLFNL1Q499Z3 407 aa16.12■□□□□ 0.17
MSH6-208ENST00000493177 OTUD7BQ6GQQ9 843 aa16.12■□□□□ 0.17
MSH6-208ENST00000493177 RUFY2Q8WXA3 655 aa16.12■□□□□ 0.17
MSH6-208ENST00000493177 NSUN4Q96CB9 384 aaKnown RBP16.12■□□□□ 0.17
MSH6-208ENST00000493177 ZNF341Q9BYN7 854 aa16.12■□□□□ 0.17
MSH6-208ENST00000493177 IGSF3O75054 1194 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 TBC1D8O95759 1140 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 ALDH1A1P00352 501 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 TM4SF4P48230 202 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 INHBEP58166 350 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 NFIAQ12857 509 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 DGKZQ13574 1117 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 VGLL4Q14135 290 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 MIGA2Q7L4E1 593 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 TICAM2Q86XR7 235 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 APPBP2Q92624 585 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 FAM227BQ96M60 508 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 PCNTO95613 3336 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 GAKO14976 1311 aa16.11■□□□□ 0.17
MSH6-208ENST00000493177 MYH7P12883 1935 aa16.1■□□□□ 0.17
MSH6-208ENST00000493177 A0A0D9SFI3 127 aa16.1■□□□□ 0.17
MSH6-208ENST00000493177 ZMYM1Q5SVZ6 1142 aa16.1■□□□□ 0.17
MSH6-208ENST00000493177 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.1■□□□□ 0.17
MSH6-208ENST00000493177 OTUD5Q96G74 571 aa16.1■□□□□ 0.17
MSH6-208ENST00000493177 TCRBV5S4A2TA0A5A2 114 aa16.09■□□□□ 0.17
MSH6-208ENST00000493177 MCMDC2Q4G0Z9 681 aa16.09■□□□□ 0.17
MSH6-208ENST00000493177 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.09■□□□□ 0.17
MSH6-208ENST00000493177 MIGA1Q8NAN2 632 aa16.09■□□□□ 0.17
MSH6-208ENST00000493177 SEC62Q99442 399 aaKnown RBP16.09■□□□□ 0.17
MSH6-208ENST00000493177 HELLSQ9NRZ9 838 aa16.09■□□□□ 0.17
MSH6-208ENST00000493177 M0R2C6 588 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 ENTPD3O75355 529 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 C8orf34Q49A92 452 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 TMED8Q6PL24 325 aaPredicted RBP16.08■□□□□ 0.16
MSH6-208ENST00000493177 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 IFNL1Q8IU54 200 aa16.08■□□□□ 0.16
MSH6-208ENST00000493177 ZNF384Q8TF68 577 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms