RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 RBCK1Q9BYM8 510 aa9.42□□□□□ -0.9
TPR-208ENST00000492973 CD163L1Q9NR16 1453 aa9.41□□□□□ -0.9
TPR-208ENST00000492973 CPSF1Q10570 1443 aaKnown RBP9.41□□□□□ -0.9
TPR-208ENST00000492973 SBNO1A3KN83 1393 aa9.41□□□□□ -0.9
TPR-208ENST00000492973 SPATA31A3Q5VYP0 1347 aa9.41□□□□□ -0.9
TPR-208ENST00000492973 LILRB5O75023 590 aa9.41□□□□□ -0.9
TPR-208ENST00000492973 RGS9O75916 674 aaPredicted RBP9.41□□□□□ -0.9
TPR-208ENST00000492973 NID1P14543 1247 aa9.41□□□□□ -0.9
TPR-208ENST00000492973 EIF2AK2P19525 551 aaKnown RBP9.41□□□□□ -0.9
TPR-208ENST00000492973 PDE3BQ13370 1112 aa9.41□□□□□ -0.9
TPR-208ENST00000492973 POLR3GLQ9BT43 218 aa9.41□□□□□ -0.9
TPR-208ENST00000492973 JPH1Q9HDC5 661 aaPredicted RBP9.41□□□□□ -0.9
TPR-208ENST00000492973 FOXD3Q9UJU5 478 aaPredicted RBP9.41□□□□□ -0.9
TPR-208ENST00000492973 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.41□□□□□ -0.9
TPR-208ENST00000492973 TOPAZ1Q8N9V7 1692 aa9.41□□□□□ -0.9
TPR-208ENST00000492973 SSH2Q76I76 1423 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 CCDC7Q96M83 1385 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 NINLQ9Y2I6 1382 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 WASHC2AQ641Q2 1341 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 KIF1AQ12756 1690 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 PIK3R2O00459 728 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 IRS1P35568 1242 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 AFF1P51825 1210 aaKnown RBP9.4□□□□□ -0.9
TPR-208ENST00000492973 GRIK5Q16478 980 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 ELMSAN1Q6PJG2 1045 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 LRRC59Q96AG4 307 aaKnown RBP9.4□□□□□ -0.9
TPR-208ENST00000492973 SUV39H2Q9H5I1 410 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 KANSL3Q9P2N6 904 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 SALL4Q9UJQ4 1053 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 DCTN4Q9UJW0 460 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 COL16A1Q07092 1604 aaPredicted RBP9.4□□□□□ -0.9
TPR-208ENST00000492973 NHSL1Q5SYE7 1610 aa9.4□□□□□ -0.9
TPR-208ENST00000492973 USP6P35125 1406 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 PNPLA6Q8IY17 1366 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 JCADQ9P266 1359 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 GHRHP01286 108 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 CES1P23141 567 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 DDX10Q13206 875 aaKnown RBP9.39□□□□□ -0.91
TPR-208ENST00000492973 HDGFL2Q7Z4V5 671 aaPredicted RBP9.39□□□□□ -0.91
TPR-208ENST00000492973 PMEPA1Q969W9 287 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 SMG9Q9H0W8 520 aaKnown RBP9.39□□□□□ -0.91
TPR-208ENST00000492973 TERF2IPQ9NYB0 399 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 RGPD8O14715 1765 aaPredicted RBP9.39□□□□□ -0.91
TPR-208ENST00000492973 TNS3Q68CZ2 1445 aa9.39□□□□□ -0.91
TPR-208ENST00000492973 KTN1Q86UP2 1357 aaKnown RBP9.38□□□□□ -0.91
TPR-208ENST00000492973 ANKRD36BQ8N2N9 1353 aa9.38□□□□□ -0.91
TPR-208ENST00000492973 TTC21BQ7Z4L5 1316 aa9.38□□□□□ -0.91
TPR-208ENST00000492973 EREGO14944 169 aa9.38□□□□□ -0.91
TPR-208ENST00000492973 GPR182O15218 404 aa9.38□□□□□ -0.91
TPR-208ENST00000492973 PHACTR2O75167 634 aa9.38□□□□□ -0.91
TPR-208ENST00000492973 COL8A1P27658 744 aa9.38□□□□□ -0.91
TPR-208ENST00000492973 DIEXFQ68CQ4 756 aaKnown RBP9.38□□□□□ -0.91
TPR-208ENST00000492973 HOMEZQ8IX15 550 aa9.38□□□□□ -0.91
TPR-208ENST00000492973 CEP120Q8N960 986 aa9.38□□□□□ -0.91
TPR-208ENST00000492973 BRD4O60885 1362 aaPredicted RBP9.37□□□□□ -0.91
TPR-208ENST00000492973 RASSF7Q02833 373 aa9.37□□□□□ -0.91
TPR-208ENST00000492973 PLVAPQ9BX97 442 aa9.37□□□□□ -0.91
TPR-208ENST00000492973 RBSNQ9H1K0 784 aa9.37□□□□□ -0.91
TPR-208ENST00000492973 ZFYVE28Q9HCC9 887 aa9.37□□□□□ -0.91
TPR-208ENST00000492973 PHLPP1O60346 1717 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 ATP11AP98196 1134 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 NUTM2GQ5VZR2 741 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 SND1Q7KZF4 910 aaKnown RBP eCLIP9.36□□□□□ -0.91
TPR-208ENST00000492973 TMC7Q7Z402 723 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 NCAPG2Q86XI2 1143 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 NME9Q86XW9 330 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 ALKBH8Q96BT7 664 aaKnown RBP9.36□□□□□ -0.91
TPR-208ENST00000492973 SPACA7Q96KW9 195 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 DMRTB1Q96MA1 342 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 PANK3Q9H999 370 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 NOP53Q9NZM5 478 aaKnown RBP9.36□□□□□ -0.91
TPR-208ENST00000492973 EDC4Q6P2E9 1401 aaKnown RBP9.36□□□□□ -0.91
TPR-208ENST00000492973 ITSN1Q15811 1721 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 ARHGEF10O15013 1369 aa9.36□□□□□ -0.91
TPR-208ENST00000492973 MAPK1P28482 360 aa9.35□□□□□ -0.91
TPR-208ENST00000492973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.35□□□□□ -0.91
TPR-208ENST00000492973 TRPM3Q9HCF6 1732 aaPredicted RBP9.35□□□□□ -0.91
TPR-208ENST00000492973 SPATA31A6Q5VVP1 1343 aa9.34□□□□□ -0.91
TPR-208ENST00000492973 TTC21AQ8NDW8 1320 aa9.34□□□□□ -0.91
TPR-208ENST00000492973 NSD3Q9BZ95 1437 aa9.34□□□□□ -0.91
TPR-208ENST00000492973 ORC1Q13415 861 aa9.34□□□□□ -0.91
TPR-208ENST00000492973 ALYREFQ86V81 257 aaKnown RBP9.34□□□□□ -0.91
TPR-208ENST00000492973 PBX4Q9BYU1 374 aa9.34□□□□□ -0.91
TPR-208ENST00000492973 RASSF4Q9H2L5 321 aa9.34□□□□□ -0.91
TPR-208ENST00000492973 USP19O94966 1318 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 MYOM1P52179 1685 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 FYB1O15117 783 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 NEFLP07196 543 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 ACPPP15309 386 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 MSL1Q68DK7 614 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 NIF3L1Q9GZT8 377 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 DZANK1Q9NVP4 752 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 TRIM33Q9UPN9 1127 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 LRP6O75581 1613 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 USP31Q70CQ4 1352 aa9.33□□□□□ -0.92
TPR-208ENST00000492973 SPDYE3A6NKU9 549 aa9.32□□□□□ -0.92
TPR-208ENST00000492973 NFKBIEO00221 500 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms