RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SSH3Q8TE77 659 aa15.32■□□□□ 0.04
COL6A1-205ENST00000492851 ARMC5Q96C12 935 aa15.32■□□□□ 0.04
COL6A1-205ENST00000492851 NOL10Q9BSC4 688 aaKnown RBP15.32■□□□□ 0.04
COL6A1-205ENST00000492851 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
COL6A1-205ENST00000492851 ZFPM1Q8IX07 1006 aa15.31■□□□□ 0.04
COL6A1-205ENST00000492851 SCYL3Q8IZE3 742 aa15.31■□□□□ 0.04
COL6A1-205ENST00000492851 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
COL6A1-205ENST00000492851 LRP2BPQ9P2M1 347 aa15.31■□□□□ 0.04
COL6A1-205ENST00000492851 MYH13Q9UKX3 1938 aa15.31■□□□□ 0.04
COL6A1-205ENST00000492851 PHF20L1A8MW92 1017 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 PDHXO00330 501 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 ZBTB7BO15156 539 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-205ENST00000492851 TBC1D12O60347 775 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 SURF6O75683 361 aaKnown RBP15.3■□□□□ 0.04
COL6A1-205ENST00000492851 BAG3O95817 575 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 HOXD10P28358 340 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 TTC39AQ5SRH9 613 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 ITPRIPQ8IWB1 547 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 NSUN4Q96CB9 384 aaKnown RBP15.3■□□□□ 0.04
COL6A1-205ENST00000492851 ZNF512BQ96KM6 892 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-205ENST00000492851 TMEM106CQ9BVX2 250 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 OTOFQ9HC10 1997 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 TNNQ9UQP3 1299 aa15.3■□□□□ 0.04
COL6A1-205ENST00000492851 ZBED9Q6R2W3 1325 aa15.29■□□□□ 0.04
COL6A1-205ENST00000492851 PLCG2P16885 1265 aa15.29■□□□□ 0.04
COL6A1-205ENST00000492851 LACTBP83111 547 aaPredicted RBP15.29■□□□□ 0.04
COL6A1-205ENST00000492851 PICALMQ13492 652 aa15.29■□□□□ 0.04
COL6A1-205ENST00000492851 TNNI3KQ59H18 835 aa15.29■□□□□ 0.04
COL6A1-205ENST00000492851 C17orf99Q6UX52 265 aa15.29■□□□□ 0.04
COL6A1-205ENST00000492851 PARK7Q99497 189 aaKnown RBP15.29■□□□□ 0.04
COL6A1-205ENST00000492851 NOP58Q9Y2X3 529 aaKnown RBP15.29■□□□□ 0.04
COL6A1-205ENST00000492851 ZHX2Q9Y6X8 837 aa15.29■□□□□ 0.04
COL6A1-205ENST00000492851 FPGT-TNNI3KV9GXZ4 949 aa15.29■□□□□ 0.04
COL6A1-205ENST00000492851 PTPRAP18433 802 aa15.28■□□□□ 0.04
COL6A1-205ENST00000492851 MCAMP43121 646 aa15.28■□□□□ 0.04
COL6A1-205ENST00000492851 RHBDL3P58872 404 aa15.28■□□□□ 0.04
COL6A1-205ENST00000492851 SLC9C1Q4G0N8 1177 aa15.28■□□□□ 0.04
COL6A1-205ENST00000492851 TBC1D2Q9BYX2 928 aa15.28■□□□□ 0.04
COL6A1-205ENST00000492851 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
COL6A1-205ENST00000492851 RFX7Q2KHR2 1363 aa15.27■□□□□ 0.04
COL6A1-205ENST00000492851 ATRNL1Q5VV63 1379 aa15.27■□□□□ 0.04
COL6A1-205ENST00000492851 DDTLA6NHG4 134 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-205ENST00000492851 PRPF38BQ5VTL8 546 aaKnown RBP15.27■□□□□ 0.04
COL6A1-205ENST00000492851 NAA16Q6N069 864 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-205ENST00000492851 TMED8Q6PL24 325 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-205ENST00000492851 TBC1D9Q6ZT07 1266 aa15.27■□□□□ 0.04
COL6A1-205ENST00000492851 SH3BP5LQ7L8J4 393 aa15.27■□□□□ 0.04
COL6A1-205ENST00000492851 ERC1Q8IUD2 1116 aa15.27■□□□□ 0.04
COL6A1-205ENST00000492851 OSBPL5Q9H0X9 879 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-205ENST00000492851 DHX36Q9H2U1 1008 aaKnown RBP15.27■□□□□ 0.04
COL6A1-205ENST00000492851 AFG3L2Q9Y4W6 797 aa15.27■□□□□ 0.04
COL6A1-205ENST00000492851 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.27■□□□□ 0.04
COL6A1-205ENST00000492851 A0A0G2JLL6 359 aaPredicted RBP15.26■□□□□ 0.03
COL6A1-205ENST00000492851 PPP4CP60510 307 aa15.26■□□□□ 0.03
COL6A1-205ENST00000492851 HSP90AB4PQ58FF6 505 aa15.26■□□□□ 0.03
COL6A1-205ENST00000492851 PRRT2Q7Z6L0 340 aaPredicted RBP15.26■□□□□ 0.03
COL6A1-205ENST00000492851 CERS3Q8IU89 383 aa15.26■□□□□ 0.03
COL6A1-205ENST00000492851 CHMP4BQ9H444 224 aaKnown RBP15.26■□□□□ 0.03
COL6A1-205ENST00000492851 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL6A1-205ENST00000492851 DDX4Q9NQI0 724 aaKnown RBP15.26■□□□□ 0.03
COL6A1-205ENST00000492851 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
COL6A1-205ENST00000492851 HERC5Q9UII4 1024 aaKnown RBP15.26■□□□□ 0.03
COL6A1-205ENST00000492851 FMNL1O95466 1100 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-205ENST00000492851 PSMC4P43686 418 aa15.25■□□□□ 0.03
COL6A1-205ENST00000492851 PI16Q6UXB8 463 aa15.25■□□□□ 0.03
COL6A1-205ENST00000492851 TEX11Q8IYF3 940 aa15.25■□□□□ 0.03
COL6A1-205ENST00000492851 ZNF384Q8TF68 577 aa15.25■□□□□ 0.03
COL6A1-205ENST00000492851 ZNF333Q96JL9 665 aa15.25■□□□□ 0.03
COL6A1-205ENST00000492851 DBNDD2Q9BQY9 259 aa15.25■□□□□ 0.03
COL6A1-205ENST00000492851 CPA4Q9UI42 421 aa15.25■□□□□ 0.03
COL6A1-205ENST00000492851 PTCH2Q9Y6C5 1203 aa15.25■□□□□ 0.03
COL6A1-205ENST00000492851 COL2A1P02458 1487 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-205ENST00000492851 MOGSQ13724 837 aa15.24■□□□□ 0.03
COL6A1-205ENST00000492851 GPAT2Q6NUI2 795 aa15.24■□□□□ 0.03
COL6A1-205ENST00000492851 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-205ENST00000492851 FCGRTP55899 365 aa15.23■□□□□ 0.03
COL6A1-205ENST00000492851 CAP1Q01518 475 aa15.23■□□□□ 0.03
COL6A1-205ENST00000492851 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL6A1-205ENST00000492851 SLC4A8Q2Y0W8 1093 aa15.23■□□□□ 0.03
COL6A1-205ENST00000492851 FOXP4Q8IVH2 680 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-205ENST00000492851 C1orf115Q9H7X2 142 aa15.23■□□□□ 0.03
COL6A1-205ENST00000492851 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
COL6A1-205ENST00000492851 GINM1Q9NU53 330 aa15.23■□□□□ 0.03
COL6A1-205ENST00000492851 SRRDQ9UH36 339 aa15.23■□□□□ 0.03
COL6A1-205ENST00000492851 PNMA3Q9UL41 463 aa15.23■□□□□ 0.03
COL6A1-205ENST00000492851 MYH2Q9UKX2 1941 aa15.23■□□□□ 0.03
COL6A1-205ENST00000492851 ADGRA2Q96PE1 1338 aa15.22■□□□□ 0.03
COL6A1-205ENST00000492851 POTEFA5A3E0 1075 aa15.22■□□□□ 0.03
COL6A1-205ENST00000492851 RLBP1P12271 317 aa15.22■□□□□ 0.03
COL6A1-205ENST00000492851 CEP85Q6P2H3 762 aa15.22■□□□□ 0.03
COL6A1-205ENST00000492851 GADL1Q6ZQY3 521 aa15.22■□□□□ 0.03
COL6A1-205ENST00000492851 PROCA1Q8NCQ7 364 aaPredicted RBP15.22■□□□□ 0.03
COL6A1-205ENST00000492851 RAET1EQ8TD07 263 aa15.22■□□□□ 0.03
COL6A1-205ENST00000492851 SH3RF3Q8TEJ3 882 aaPredicted RBP15.22■□□□□ 0.03
COL6A1-205ENST00000492851 TRIM47Q96LD4 638 aa15.22■□□□□ 0.03
COL6A1-205ENST00000492851 ARHGAP39Q9C0H5 1083 aa15.22■□□□□ 0.03
COL6A1-205ENST00000492851 AS3MTQ9HBK9 375 aa15.22■□□□□ 0.03
COL6A1-205ENST00000492851 AATFQ9NY61 560 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL6A1-205ENST00000492851 TNRC18O15417 2968 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-205ENST00000492851 AK9Q5TCS8 1911 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms