RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 DBNDD2Q9BQY9 259 aa22.77■■□□□ 1.24
CHD1L-209ENST00000492728 MOGSQ13724 837 aa22.76■■□□□ 1.23
CHD1L-209ENST00000492728 TNNI3KQ59H18 835 aa22.76■■□□□ 1.23
CHD1L-209ENST00000492728 SPTY2D1Q68D10 685 aaPredicted RBP22.76■■□□□ 1.23
CHD1L-209ENST00000492728 ERICH6Q7L0X2 663 aa22.76■■□□□ 1.23
CHD1L-209ENST00000492728 NSUN4Q96CB9 384 aaKnown RBP22.76■■□□□ 1.23
CHD1L-209ENST00000492728 ZFYVE28Q9HCC9 887 aa22.76■■□□□ 1.23
CHD1L-209ENST00000492728 KCNH4Q9UQ05 1017 aa22.76■■□□□ 1.23
CHD1L-209ENST00000492728 FPGT-TNNI3KV9GXZ4 949 aa22.76■■□□□ 1.23
CHD1L-209ENST00000492728 AK9Q5TCS8 1911 aa22.76■■□□□ 1.23
CHD1L-209ENST00000492728 GPR75-ASB3A0A0A6YYF3 556 aa22.75■■□□□ 1.23
CHD1L-209ENST00000492728 PICALMQ13492 652 aa22.75■■□□□ 1.23
CHD1L-209ENST00000492728 GORABQ5T7V8 394 aa22.75■■□□□ 1.23
CHD1L-209ENST00000492728 EFCC1Q9HA90 598 aa22.75■■□□□ 1.23
CHD1L-209ENST00000492728 PTPN22Q9Y2R2 807 aa22.75■■□□□ 1.23
CHD1L-209ENST00000492728 ARHGAP39Q9C0H5 1083 aa22.74■■□□□ 1.23
CHD1L-209ENST00000492728 SLF2Q8IX21 1173 aa22.73■■□□□ 1.23
CHD1L-209ENST00000492728 PANK1Q8TE04 598 aa22.73■■□□□ 1.23
CHD1L-209ENST00000492728 GPR108Q9NPR9 543 aa22.73■■□□□ 1.23
CHD1L-209ENST00000492728 SNRKQ9NRH2 765 aa22.73■■□□□ 1.23
CHD1L-209ENST00000492728 TLR7Q9NYK1 1049 aaKnown RBP22.73■■□□□ 1.23
CHD1L-209ENST00000492728 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.73■■□□□ 1.23
CHD1L-209ENST00000492728 MAST2Q6P0Q8 1798 aa22.73■■□□□ 1.23
CHD1L-209ENST00000492728 TLR2O60603 784 aa22.72■■□□□ 1.23
CHD1L-209ENST00000492728 SURF6O75683 361 aaKnown RBP22.72■■□□□ 1.23
CHD1L-209ENST00000492728 MAP3K10Q02779 954 aa22.72■■□□□ 1.23
CHD1L-209ENST00000492728 ZCCHC17Q9NP64 241 aaKnown RBP22.72■■□□□ 1.23
CHD1L-209ENST00000492728 NOP58Q9Y2X3 529 aaKnown RBP22.72■■□□□ 1.23
CHD1L-209ENST00000492728 ADGRA2Q96PE1 1338 aa22.72■■□□□ 1.23
CHD1L-209ENST00000492728 PDE4DIPQ5VU43 2346 aa22.71■■□□□ 1.23
CHD1L-209ENST00000492728 UQCRFS1P1P0C7P4 283 aa22.71■■□□□ 1.23
CHD1L-209ENST00000492728 CEP85Q6P2H3 762 aa22.71■■□□□ 1.23
CHD1L-209ENST00000492728 ZSCAN29Q8IWY8 852 aaPredicted RBP22.71■■□□□ 1.23
CHD1L-209ENST00000492728 SCYL3Q8IZE3 742 aa22.71■■□□□ 1.23
CHD1L-209ENST00000492728 RAI14Q9P0K7 980 aa22.71■■□□□ 1.23
CHD1L-209ENST00000492728 DBNLQ9UJU6 430 aaKnown RBP22.71■■□□□ 1.23
CHD1L-209ENST00000492728 MKI67P46013 3256 aaKnown RBP22.71■■□□□ 1.23
CHD1L-209ENST00000492728 FAM196BA6NMK8 535 aa22.7■■□□□ 1.22
CHD1L-209ENST00000492728 OS9Q13438 667 aaPredicted RBP22.7■■□□□ 1.22
CHD1L-209ENST00000492728 ANKRD23Q86SG2 305 aa22.7■■□□□ 1.22
CHD1L-209ENST00000492728 CCDC84Q86UT8 332 aaPredicted RBP22.7■■□□□ 1.22
CHD1L-209ENST00000492728 DOCK1Q14185 1865 aa22.7■■□□□ 1.22
CHD1L-209ENST00000492728 PHIPQ8WWQ0 1821 aa22.69■■□□□ 1.22
CHD1L-209ENST00000492728 POTEFA5A3E0 1075 aa22.69■■□□□ 1.22
CHD1L-209ENST00000492728 CTGFP29279 349 aa22.69■■□□□ 1.22
CHD1L-209ENST00000492728 TTC39AQ5SRH9 613 aa22.69■■□□□ 1.22
CHD1L-209ENST00000492728 GPAT2Q6NUI2 795 aa22.69■■□□□ 1.22
CHD1L-209ENST00000492728 ADGRA1Q86SQ6 560 aa22.69■■□□□ 1.22
CHD1L-209ENST00000492728 PTCH2Q9Y6C5 1203 aa22.69■■□□□ 1.22
CHD1L-209ENST00000492728 COL2A1P02458 1487 aaPredicted RBP22.68■■□□□ 1.22
CHD1L-209ENST00000492728 PDHXO00330 501 aa22.68■■□□□ 1.22
CHD1L-209ENST00000492728 CYP2E1P05181 493 aaPredicted RBP22.68■■□□□ 1.22
CHD1L-209ENST00000492728 PTPRAP18433 802 aa22.68■■□□□ 1.22
CHD1L-209ENST00000492728 LACTBP83111 547 aaPredicted RBP22.68■■□□□ 1.22
CHD1L-209ENST00000492728 C17orf99Q6UX52 265 aa22.68■■□□□ 1.22
CHD1L-209ENST00000492728 ARMC5Q96C12 935 aa22.68■■□□□ 1.22
CHD1L-209ENST00000492728 EAF2Q96CJ1 260 aaPredicted RBP22.68■■□□□ 1.22
CHD1L-209ENST00000492728 LRP2BPQ9P2M1 347 aa22.68■■□□□ 1.22
CHD1L-209ENST00000492728 CPA4Q9UI42 421 aa22.68■■□□□ 1.22
CHD1L-209ENST00000492728 MYO5AQ9Y4I1 1855 aaKnown RBP22.68■■□□□ 1.22
CHD1L-209ENST00000492728 SIPA1L1O43166 1804 aa22.68■■□□□ 1.22
CHD1L-209ENST00000492728 NPM3O75607 178 aaKnown RBP22.67■■□□□ 1.22
CHD1L-209ENST00000492728 ECM2O94769 699 aaPredicted RBP22.67■■□□□ 1.22
CHD1L-209ENST00000492728 ZAP70P43403 619 aa22.67■■□□□ 1.22
CHD1L-209ENST00000492728 GSTO1P78417 241 aa22.67■■□□□ 1.22
CHD1L-209ENST00000492728 SH3RF3Q8TEJ3 882 aaPredicted RBP22.67■■□□□ 1.22
CHD1L-209ENST00000492728 CCDC8Q9H0W5 538 aaPredicted RBP22.67■■□□□ 1.22
CHD1L-209ENST00000492728 OSBPL5Q9H0X9 879 aaPredicted RBP22.67■■□□□ 1.22
CHD1L-209ENST00000492728 PIH1D3Q9NQM4 214 aaKnown RBP22.67■■□□□ 1.22
CHD1L-209ENST00000492728 ZHX2Q9Y6X8 837 aa22.67■■□□□ 1.22
CHD1L-209ENST00000492728 PTPRFP10586 1907 aa22.67■■□□□ 1.22
CHD1L-209ENST00000492728 LDHCP07864 332 aa22.66■■□□□ 1.22
CHD1L-209ENST00000492728 RRP1BQ14684 758 aaKnown RBP22.66■■□□□ 1.22
CHD1L-209ENST00000492728 EXOC6BQ9Y2D4 811 aa22.66■■□□□ 1.22
CHD1L-209ENST00000492728 AFG3L2Q9Y4W6 797 aa22.66■■□□□ 1.22
CHD1L-209ENST00000492728 RBBP6Q7Z6E9 1792 aaKnown RBP22.66■■□□□ 1.22
CHD1L-209ENST00000492728 A0A0G2JLL6 359 aaPredicted RBP22.65■■□□□ 1.22
CHD1L-209ENST00000492728 CXCL11O14625 94 aa22.65■■□□□ 1.22
CHD1L-209ENST00000492728 CCDC158Q5M9N0 1113 aa22.65■■□□□ 1.22
CHD1L-209ENST00000492728 PRRT2Q7Z6L0 340 aaPredicted RBP22.65■■□□□ 1.22
CHD1L-209ENST00000492728 TEX11Q8IYF3 940 aa22.65■■□□□ 1.22
CHD1L-209ENST00000492728 ZNF512BQ96KM6 892 aaPredicted RBP22.65■■□□□ 1.22
CHD1L-209ENST00000492728 PICK1Q9NRD5 415 aa22.65■■□□□ 1.22
CHD1L-209ENST00000492728 AATFQ9NY61 560 aaKnown RBP eCLIP22.65■■□□□ 1.22
CHD1L-209ENST00000492728 CYP2C8P10632 490 aa22.64■■□□□ 1.21
CHD1L-209ENST00000492728 ZNF333Q96JL9 665 aa22.64■■□□□ 1.21
CHD1L-209ENST00000492728 NDUFB9Q9Y6M9 179 aa22.64■■□□□ 1.21
CHD1L-209ENST00000492728 CDK5RAP2Q96SN8 1893 aa22.63■■□□□ 1.21
CHD1L-209ENST00000492728 TBC1D12O60347 775 aa22.63■■□□□ 1.21
CHD1L-209ENST00000492728 CTNND1O60716 968 aaKnown RBP22.63■■□□□ 1.21
CHD1L-209ENST00000492728 NAA16Q6N069 864 aaPredicted RBP22.63■■□□□ 1.21
CHD1L-209ENST00000492728 MAP4K4O95819 1239 aaPredicted RBP22.62■■□□□ 1.21
CHD1L-209ENST00000492728 TRIM47Q96LD4 638 aa22.62■■□□□ 1.21
CHD1L-209ENST00000492728 KIAA0100Q14667 2235 aaKnown RBP22.62■■□□□ 1.21
CHD1L-209ENST00000492728 TRIM75PA6NK02 468 aa22.61■■□□□ 1.21
CHD1L-209ENST00000492728 BCRP11274 1271 aa22.61■■□□□ 1.21
CHD1L-209ENST00000492728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.61■■□□□ 1.215e-6■□□□□ 10
CHD1L-209ENST00000492728 FOCADQ5VW36 1801 aa22.61■■□□□ 1.21
CHD1L-209ENST00000492728 FLT1P17948 1338 aa22.6■■□□□ 1.21
CHD1L-209ENST00000492728 ATAD5Q96QE3 1844 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms