RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SNX11Q9Y5W9 270 aa5.27□□□□□ -1.57
HMGB1P30-201ENST00000492455 SYNGAP1Q96PV0 1343 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 ABL1P00519 1130 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 GLI1P08151 1106 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 INHBBP09529 407 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 C1QTNF9P0C862 333 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 ARHGAP4P98171 946 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 ZP2Q05996 745 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 ZNF423Q2M1K9 1284 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 CIAPIN1Q6FI81 312 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 ALKBH2Q6NS38 261 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 PRDM7Q9NQW5 492 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 LATS2Q9NRM7 1088 aa5.26□□□□□ -1.57
HMGB1P30-201ENST00000492455 H3BRB1 525 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 SLFN14P0C7P3 912 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 TMEM253P0C7T8 217 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 USP5P45974 858 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 OXCT1P55809 520 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 AP3B2Q13367 1082 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 TMEM67Q5HYA8 995 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 PEAR1Q5VY43 1037 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 PRR23BQ6ZRT6 265 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 SMYD4Q8IYR2 804 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 FBXO15Q8NCQ5 510 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 KIRREL1Q96J84 757 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 WDR18Q9BV38 432 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 KRTAP9-3Q9BYQ3 159 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 TUT1Q9H6E5 874 aaKnown RBP5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 CTNND2Q9UQB3 1225 aa5.25□□□□□ -1.57
HMGB1P30-201ENST00000492455 NPIPB6E9PJ23 425 aa5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 RNGTTO60942 597 aaKnown RBP5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 MPSTP25325 297 aa5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 EIF1AXP47813 144 aaKnown RBP5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 ID3Q02535 119 aa5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 FKBP4Q02790 459 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 AMIGO3Q86WK7 504 aa5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 LIN7BQ9HAP6 207 aa5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 FOXD3Q9UJU5 478 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 PPP1R9AQ9ULJ8 1098 aa5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 POLIQ9UNA4 740 aa5.24□□□□□ -1.57
HMGB1P30-201ENST00000492455 TMPRSS2O15393 492 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 ECEL1O95672 775 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 B3GALT4O96024 378 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 SF3B2Q13435 895 aaKnown RBP5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 TMCO4Q5TGY1 634 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 CYFIP1Q7L576 1253 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 CCNJLQ8IV13 435 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 TRIM56Q9BRZ2 755 aaKnown RBP5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 DUSP23Q9BVJ7 150 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 SSU72Q9NP77 194 aaKnown RBP5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 GTF2IRD1Q9UHL9 959 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 MTMR7Q9Y216 660 aa5.23□□□□□ -1.57
HMGB1P30-201ENST00000492455 TCAF2A6NFQ2 919 aa5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 FZD6O60353 706 aa5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 MFAP1P55081 439 aaKnown RBP5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 KCNA10Q16322 511 aa5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 DNAJC14Q6Y2X3 702 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 FANCD2OSQ96PS1 177 aa5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 CSRNP1Q96S65 589 aa5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 DIRC2Q96SL1 478 aa5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 NSUN3Q9H649 340 aaKnown RBP5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 PCOLCE2Q9UKZ9 415 aa5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 PLAGL2Q9UPG8 496 aa5.22□□□□□ -1.57
HMGB1P30-201ENST00000492455 LEFTY1O75610 366 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 IGHA2P01877 340 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 SPRED3Q2MJR0 410 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 GLYCTKQ8IVS8 523 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 TOP6BLQ8N6T0 577 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 RGS22Q8NE09 1264 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 TNKS2Q9H2K2 1166 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 ZFYVE28Q9HCC9 887 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 JAG2Q9Y219 1238 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 U3KQE9 123 aa5.21□□□□□ -1.58
HMGB1P30-201ENST00000492455 FAM13AO94988 1023 aa5.2□□□□□ -1.58
HMGB1P30-201ENST00000492455 LIG1P18858 919 aa5.2□□□□□ -1.58
HMGB1P30-201ENST00000492455 GRIA4P48058 902 aa5.2□□□□□ -1.58
HMGB1P30-201ENST00000492455 CCDC27Q2M243 656 aa5.2□□□□□ -1.58
HMGB1P30-201ENST00000492455 FYB2Q5VWT5 728 aa5.2□□□□□ -1.58
HMGB1P30-201ENST00000492455 RELTQ969Z4 430 aa5.2□□□□□ -1.58
HMGB1P30-201ENST00000492455 CCDC87Q9NVE4 849 aa5.2□□□□□ -1.58
HMGB1P30-201ENST00000492455 A0A1W2PP55 124 aa5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 GNAT3A8MTJ3 354 aa5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 NUAK1O60285 661 aa5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 POLR3DP05423 398 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 HCLS1P14317 486 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 TTLL4Q14679 1199 aa5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 DBX2Q6ZNG2 339 aa5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 CCDC120Q96HB5 630 aa5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 EPB41L4BQ9H329 900 aa5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 DCP1AQ9NPI6 582 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 BIN2Q9UBW5 565 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P30-201ENST00000492455 ATG14Q6ZNE5 492 aa5.18□□□□□ -1.58
HMGB1P30-201ENST00000492455 TCF12Q99081 682 aa5.18□□□□□ -1.58
HMGB1P30-201ENST00000492455 ZNF576Q9H609 170 aa5.18□□□□□ -1.58
HMGB1P30-201ENST00000492455 CD320Q9NPF0 282 aa5.18□□□□□ -1.58
HMGB1P30-201ENST00000492455 DISC1Q9NRI5 854 aa5.18□□□□□ -1.58
HMGB1P30-201ENST00000492455 KRT1P04264 644 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms