RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, human

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-215	ENST00000492417	FGA	P02671	866 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	ZNF76	P36508	570 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	APOBR	Q0VD83	1088 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	ANKRD1	Q15327	319 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	LARP1B	Q659C4	914 aa	Known RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	KRT23	Q9C075	422 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	TANGO6	Q9C0B7	1094 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	DDX49	Q9Y6V7	483 aa	Known RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	KDM2B	Q8NHM5	1336 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	hCG_1642624	A0A1W2PR95	340 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	PATL2	C9JE40	543 aa	Known RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	CYP2D6	P10635	497 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	HSPD1	P10809	573 aa	Known RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	CASP7	P55210	303 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	ANGEL2	Q5VTE6	544 aa	Known RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	LRP10	Q7Z4F1	713 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	UBE2Q2	Q8WVN8	375 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	SLC26A6	Q9BXS9	759 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	RRAGC	Q9HB90	399 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	INCENP	Q9NQS7	918 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	RNF216	Q9NWF9	866 aa	Predicted RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	TRPM3	Q9HCF6	1732 aa	Predicted RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	SEMA3E	O15041	775 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	MYC	P01106	439 aa	Predicted RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	ADD2	P35612	726 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	METAP2	P50579	478 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	PPARA	Q07869	468 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	CERKL	Q49MI3	558 aa	Predicted RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	GADL1	Q6ZQY3	521 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	LRRC47	Q8N1G4	583 aa	Known RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	SLC44A5	Q8NCS7	719 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	CCDC43	Q96MW1	224 aa	Known RBP	5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	PAGR1	Q9BTK6	254 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	HOMER2	Q9NSB8	354 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	GGA3	Q9NZ52	723 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	ANKRD26	Q9UPS8	1709 aa		5.22	□□□□□ -1.57
TRA2B-215	ENST00000492417	TRIM75P	A6NK02	468 aa		5.21	□□□□□ -1.57
TRA2B-215	ENST00000492417	MAP1S	Q66K74	1059 aa	Predicted RBP	5.21	□□□□□ -1.57
TRA2B-215	ENST00000492417	SMCR8	Q8TEV9	937 aa	Predicted RBP	5.21	□□□□□ -1.57
TRA2B-215	ENST00000492417	HACL1	Q9UJ83	578 aa		5.21	□□□□□ -1.57
TRA2B-215	ENST00000492417	IQCA1L	A6NCM1	817 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	ZBTB43	O43298	467 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	UBE3C	Q15386	1083 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	STRIP1	Q5VSL9	837 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	RSBN1L	Q6PCB5	846 aa	Predicted RBP	5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	PI4K2B	Q8TCG2	481 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	TMOD4	Q9NZQ9	345 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	BIN2	Q9UBW5	565 aa	Predicted RBP	5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	SLC27A2	O14975	620 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	EPS15	P42566	896 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	RASA3	Q14644	834 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	SKOR2	Q2VWA4	1001 aa	Predicted RBP	5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	DCAF15	Q66K64	600 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	MTERF4	Q7Z6M4	381 aa	Known RBP	5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	CCDC84	Q86UT8	332 aa	Predicted RBP	5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	CMTR1	Q8N1G2	835 aa	Known RBP	5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	CNNM2	Q9H8M5	875 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	XIRP1	Q702N8	1843 aa	Known RBP	5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	RRP9	O43818	475 aa	Known RBP	5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	GOLGA8H	P0CJ92	632 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	YY1	P25490	414 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	SLC1A4	P43007	532 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	NLRP5	P59047	1200 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	SUPT20HL1	Q3ZLR7	823 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	HEATR3	Q7Z4Q2	680 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	BICD2	Q8TD16	824 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	UIMC1	Q96RL1	719 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	ORC3	Q9UBD5	711 aa	Predicted RBP	5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	SERPINB13	Q9UIV8	391 aa		5.21	□□□□□ -1.58
TRA2B-215	ENST00000492417	SHPRH	Q149N8	1683 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	CCDC196	A0A1B0GTZ2	297 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417		K7ELQ4	463 aa	Predicted RBP	5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	UTY	O14607	1347 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	FIBP	O43427	364 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	KIF5B	P33176	963 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	RTN1	Q16799	776 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	NBPF9	Q3BBW0	867 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	C8orf34	Q49A92	452 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	ZMYM1	Q5SVZ6	1142 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	FBXO33	Q7Z6M2	555 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	SLC10A4	Q96EP9	437 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	PRMT6	Q96LA8	375 aa	Predicted RBP	5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	WRNIP1	Q96S55	665 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	PLEKHG2	Q9H7P9	1386 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	NCOA5	Q9HCD5	579 aa	Known RBP	5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	ARHGEF10L	Q9HCE6	1279 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	DAGLA	Q9Y4D2	1042 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	ABCC6	O95255	1503 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	MRC1	P22897	1456 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	CDKL5	O76039	1030 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	BRD2	P25440	801 aa	Known RBP	5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	HOXA10	P31260	410 aa	Predicted RBP	5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	IRX3	P78415	501 aa	Predicted RBP	5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	CSPP1	Q1MSJ5	1256 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	ABCB5	Q2M3G0	1257 aa		5.2	□□□□□ -1.58
TRA2B-215	ENST00000492417	GRIPAP1	Q4V328	841 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms