RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 LMOD1P29536 600 aaPredicted RBP18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 ZNF34Q8IZ26 560 aa18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 CLIC6Q96NY7 704 aa18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 DISP2A7MBM2 1401 aa18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 MBD4O95243 580 aa18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 ATP1A3P13637 1013 aa18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 FANCCQ00597 558 aa18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 MAGEB6Q8N7X4 407 aa18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 TAOK2Q9UL54 1235 aa18.62■□□□□ 0.57
SEMA4D-220ENST00000492386 SPDYE4A6NLX3 237 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 PNOCQ13519 176 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 TRIM29Q14134 588 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 NAPBQ9H115 298 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 SLC12A7Q9Y666 1083 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 NID2Q14112 1375 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 IFIT3O14879 490 aaKnown RBP18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 CUTAO60888 179 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 ZSCAN20P17040 1043 aaPredicted RBP18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 SFPQP23246 707 aaKnown RBP eCLIP18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 KCNJ6P48051 423 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 METTL16Q86W50 562 aaKnown RBP18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 ARMT1Q9H993 441 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 PRDM4Q9UKN5 801 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 ZNF215Q9UL58 517 aaPredicted RBP18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 BCORQ6W2J9 1755 aa18.61■□□□□ 0.57
SEMA4D-220ENST00000492386 GSG1L2A8MUP6 293 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 FMNL1O95466 1100 aaPredicted RBP18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 SSRP1Q08945 709 aaKnown RBP18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 MAP3K12Q12852 859 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 KIF18AQ8NI77 898 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 SLC26A6Q9BXS9 759 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 BTG4Q9NY30 223 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 KIF2AO00139 706 aaPredicted RBP18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 SNAP23O00161 211 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 SLC5A1P13866 664 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 IL6STP40189 918 aaPredicted RBP18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 DHX8Q14562 1220 aaKnown RBP18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 LONRF3Q496Y0 759 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 AKNAD1Q5T1N1 836 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 PPP1R13BQ96KQ4 1090 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 FEZ1Q99689 392 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 CNNM2Q9H8M5 875 aa18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 CGNQ9P2M7 1197 aaKnown RBP18.6■□□□□ 0.57
SEMA4D-220ENST00000492386 PSDA5PKW4 1024 aaPredicted RBP18.59■□□□□ 0.57
SEMA4D-220ENST00000492386 IFNAR1P17181 557 aa18.59■□□□□ 0.57
SEMA4D-220ENST00000492386 FOXP4Q8IVH2 680 aaPredicted RBP18.59■□□□□ 0.57
SEMA4D-220ENST00000492386 AK7Q96M32 723 aa18.59■□□□□ 0.57
SEMA4D-220ENST00000492386 GUCY1A2P33402 732 aa18.59■□□□□ 0.57
SEMA4D-220ENST00000492386 MYL5Q02045 173 aa18.59■□□□□ 0.57
SEMA4D-220ENST00000492386 KRBA2Q6ZNG9 492 aa18.59■□□□□ 0.57
SEMA4D-220ENST00000492386 NOSTRINQ8IVI9 506 aa18.59■□□□□ 0.57
SEMA4D-220ENST00000492386 KCNH3Q9ULD8 1083 aa18.59■□□□□ 0.57
SEMA4D-220ENST00000492386 PRKAB2O43741 272 aa18.58■□□□□ 0.56
SEMA4D-220ENST00000492386 DPF2Q92785 391 aa18.58■□□□□ 0.56
SEMA4D-220ENST00000492386 PKNOX2Q96KN3 472 aa18.58■□□□□ 0.56
SEMA4D-220ENST00000492386 KRT23Q9C075 422 aa18.58■□□□□ 0.56
SEMA4D-220ENST00000492386 STRCQ7RTU9 1775 aa18.58■□□□□ 0.56
SEMA4D-220ENST00000492386 TOB1P50616 345 aaPredicted RBP18.57■□□□□ 0.56
SEMA4D-220ENST00000492386 MFSD6Q6ZSS7 791 aa18.57■□□□□ 0.56
SEMA4D-220ENST00000492386 STK11IPQ8N1F8 1099 aa18.57■□□□□ 0.56
SEMA4D-220ENST00000492386 BTBD18B2RXH4 712 aa18.57■□□□□ 0.56
SEMA4D-220ENST00000492386 MMP1P03956 469 aa18.57■□□□□ 0.56
SEMA4D-220ENST00000492386 LCORLQ8N3X6 602 aa18.57■□□□□ 0.56
SEMA4D-220ENST00000492386 KRI1Q8N9T8 703 aaKnown RBP18.57■□□□□ 0.56
SEMA4D-220ENST00000492386 STAG1Q8WVM7 1258 aa18.57■□□□□ 0.56
SEMA4D-220ENST00000492386 WASF1Q92558 559 aa18.57■□□□□ 0.56
SEMA4D-220ENST00000492386 MDM2Q00987 491 aaPredicted RBP18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 DMTNQ08495 405 aa18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 SUSD4Q5VX71 490 aa18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 CNNM3Q8NE01 707 aa18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 ERO1AQ96HE7 468 aa18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 BCL11BQ9C0K0 894 aaPredicted RBP18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 SEC31BQ9NQW1 1179 aa18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 PCDHA5Q9Y5H7 936 aa18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 BMP6P22004 513 aa18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 UBASH3AP57075 661 aa18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 ELOA2Q8IYF1 753 aaPredicted RBP18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 ZNF335Q9H4Z2 1342 aaPredicted RBP18.56■□□□□ 0.56
SEMA4D-220ENST00000492386 FOXN1O15353 648 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 DIS3L2Q8IYB7 885 aaKnown RBP18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 SYTL4Q96C24 671 aaPredicted RBP18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 ZKSCAN3Q9BRR0 538 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 L2HGDHQ9H9P8 463 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 OGFRQ9NZT2 677 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 KCNJ14Q9UNX9 436 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 PLCH1Q4KWH8 1693 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 PHLPP1O60346 1717 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 CBFA2T2O43439 604 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 SLU7O95391 586 aaKnown RBP18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 RTN1Q16799 776 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 OLFM4Q6UX06 510 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 MPHOSPH8Q99549 860 aa18.55■□□□□ 0.56
SEMA4D-220ENST00000492386 MYO1BO43795 1136 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 NRDCO43847 1150 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 SERPINC1P01008 464 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 GNAT2P19087 354 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 TDO2P48775 406 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms