RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 IARSP41252 1262 aaKnown RBP14.46□□□□□ -0.09
HMGN1-220ENST00000492280 ADALQ6DHV7 355 aa14.46□□□□□ -0.09
HMGN1-220ENST00000492280 MFSD6Q6ZSS7 791 aa14.46□□□□□ -0.09
HMGN1-220ENST00000492280 CACTINQ8WUQ7 758 aaKnown RBP14.46□□□□□ -0.09
HMGN1-220ENST00000492280 C16orf45Q96MC5 204 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-220ENST00000492280 DOCK2Q92608 1830 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 CCDC69A6NI79 296 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 AXDND1Q5T1B0 1012 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-220ENST00000492280 AKNAD1Q5T1N1 836 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 C8orf37Q96NL8 207 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 TFCP2L1Q9NZI6 479 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 ARAP2Q8WZ64 1704 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 GRIN1Q05586 938 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 TBC1D9BQ66K14 1250 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 SPATA31A5Q5VU36 1347 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 SPATA31A7Q8IWB4 1347 aa14.45□□□□□ -0.1
HMGN1-220ENST00000492280 CICQ96RK0 1608 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-220ENST00000492280 BTBD18B2RXH4 712 aa14.44□□□□□ -0.1
HMGN1-220ENST00000492280 ZNF202O95125 648 aa14.44□□□□□ -0.1
HMGN1-220ENST00000492280 NR5A1Q13285 461 aa14.44□□□□□ -0.1
HMGN1-220ENST00000492280 HSP90AA4PQ58FG1 418 aa14.44□□□□□ -0.1
HMGN1-220ENST00000492280 POLR3EQ9NVU0 708 aa14.44□□□□□ -0.1
HMGN1-220ENST00000492280 ZNF384Q8TF68 577 aa14.44□□□□□ -0.1
HMGN1-220ENST00000492280 NRAPQ86VF7 1730 aa14.44□□□□□ -0.1
HMGN1-220ENST00000492280 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 GOLGA6L6A8MZA4 724 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 FOXN1O15353 648 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 CHAF1AQ13111 956 aaPredicted RBP14.43□□□□□ -0.1
HMGN1-220ENST00000492280 PARP10Q53GL7 1025 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 TICAM2Q86XR7 235 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 KCNG4Q8TDN1 519 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 MYH13Q9UKX3 1938 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 SHC4Q6S5L8 630 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 OXER1Q8TDS5 423 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 USP27XA6NNY8 438 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 PNOCQ13519 176 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 WTAPQ15007 396 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 BRAPQ7Z569 592 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 ANKRD18AQ8IVF6 992 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 NGLY1Q96IV0 654 aa14.43□□□□□ -0.1
HMGN1-220ENST00000492280 BCL9LQ86UU0 1499 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 CASZ1Q86V15 1759 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 NMT2O60551 498 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 YEATS4O95619 227 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 PPARAQ07869 468 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 CEP57L1Q8IYX8 460 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 TMEM87BQ96K49 555 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 CDCA7Q9BWT1 371 aaPredicted RBP14.42□□□□□ -0.1
HMGN1-220ENST00000492280 SPTLC3Q9NUV7 552 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 KIAA1468Q9P260 1216 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 AHDC1Q5TGY3 1603 aaPredicted RBP14.42□□□□□ -0.1
HMGN1-220ENST00000492280 COL22A1Q8NFW1 1626 aaPredicted RBP14.42□□□□□ -0.1
HMGN1-220ENST00000492280 SLC3A2P08195 630 aaKnown RBP14.42□□□□□ -0.1
HMGN1-220ENST00000492280 GPR101Q96P66 508 aaPredicted RBP14.42□□□□□ -0.1
HMGN1-220ENST00000492280 BCL2L12Q9HB09 334 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 ANO10Q9NW15 660 aa14.42□□□□□ -0.1
HMGN1-220ENST00000492280 RTN1Q16799 776 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 CPLX2Q6PUV4 134 aaKnown RBP14.41□□□□□ -0.1
HMGN1-220ENST00000492280 TXNRD3Q86VQ6 643 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 SHISA4Q96DD7 197 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 TNKSO95271 1327 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 WDR19Q8NEZ3 1342 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 CTAGE5O15320 804 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 LMOD1P29536 600 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-220ENST00000492280 SSRP1Q08945 709 aaKnown RBP14.41□□□□□ -0.1
HMGN1-220ENST00000492280 TRIM29Q14134 588 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 PTPAQ15257 358 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 ZRSR1Q15695 479 aaKnown RBP14.41□□□□□ -0.1
HMGN1-220ENST00000492280 SGMS1Q86VZ5 419 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 DIS3L2Q8IYB7 885 aaKnown RBP14.41□□□□□ -0.1
HMGN1-220ENST00000492280 PDILTQ8N807 584 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 CDC5LQ99459 802 aaKnown RBP14.41□□□□□ -0.1
HMGN1-220ENST00000492280 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGN1-220ENST00000492280 NACAP1Q9BZK3 213 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 MINPP1Q9UNW1 487 aa14.41□□□□□ -0.1
HMGN1-220ENST00000492280 THRAP3Q9Y2W1 955 aaKnown RBP14.41□□□□□ -0.1
HMGN1-220ENST00000492280 MAGEB6P1A0A0J9YX57 407 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 A0A1W2PQ27 194 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 A0A1W2PQ64 194 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 A0A1W2PQD8 194 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 CDKL5O76039 1030 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 SMC2O95347 1197 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 ATP1A3P13637 1013 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 PRDX5P30044 214 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 SYKP43405 635 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 SLC39A14Q15043 492 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 NOM1Q5C9Z4 860 aaKnown RBP14.4□□□□□ -0.1
HMGN1-220ENST00000492280 ATL3Q6DD88 541 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 GRAMD1CQ8IYS0 662 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 AATFQ9NY61 560 aaKnown RBP eCLIP14.4□□□□□ -0.1
HMGN1-220ENST00000492280 MYH6P13533 1939 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 GNPATO15228 680 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 ALX1Q15699 326 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 ZNF654Q8IZM8 581 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 STAG1Q8WVM7 1258 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 FAM84BQ96KN1 310 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-220ENST00000492280 MAP3K14Q99558 947 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 TRMT1Q9NXH9 659 aaKnown RBP14.4□□□□□ -0.1
HMGN1-220ENST00000492280 VPS54Q9P1Q0 977 aa14.4□□□□□ -0.1
HMGN1-220ENST00000492280 BCORQ6W2J9 1755 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms