RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 IQCB1Q15051 598 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 HLFQ16534 295 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 CNNM3Q8NE01 707 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
SNED1-211ENST00000491761 TRPM3Q9HCF6 1732 aaPredicted RBP12.33□□□□□ -0.44
SNED1-211ENST00000491761 CMA1P23946 247 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 PHKA1P46020 1223 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 KIF23Q02241 960 aaPredicted RBP12.32□□□□□ -0.44
SNED1-211ENST00000491761 FMR1NBQ8N0W7 255 aaPredicted RBP12.32□□□□□ -0.44
SNED1-211ENST00000491761 RNF41Q9H4P4 317 aaPredicted RBP12.32□□□□□ -0.44
SNED1-211ENST00000491761 RIPOR2Q9Y4F9 1068 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 MROH5Q6ZUA9 1318 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 RGPD5Q99666 1765 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 CCP110O43303 1012 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 RBM5P52756 815 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNED1-211ENST00000491761 NLRP12P59046 1061 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 IKQ13123 557 aaPredicted RBP12.32□□□□□ -0.44
SNED1-211ENST00000491761 IPO4Q8TEX9 1081 aaKnown RBP12.32□□□□□ -0.44
SNED1-211ENST00000491761 IFNKQ9P0W0 207 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 SNW1Q13573 536 aaKnown RBP12.32□□□□□ -0.44
SNED1-211ENST00000491761 SPATA5Q8NB90 893 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 PHKBQ93100 1093 aa12.32□□□□□ -0.44
SNED1-211ENST00000491761 PIH1D3Q9NQM4 214 aaKnown RBP12.32□□□□□ -0.44
SNED1-211ENST00000491761 PFKFB1P16118 471 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 EVCP57679 992 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 FBXL16Q8N461 479 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 ENGASEQ8NFI3 743 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 SLC4A4Q9Y6R1 1079 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 C5P01031 1676 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 GNAT2P19087 354 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 WTAPQ15007 396 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 KIF4BQ2VIQ3 1234 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 CCDC152Q4G0S7 254 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 UTP14AQ9BVJ6 771 aaKnown RBP12.31□□□□□ -0.44
SNED1-211ENST00000491761 RAI14Q9P0K7 980 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 ABCF2Q9UG63 623 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 ZBTB1Q9Y2K1 713 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 CAMTA1Q9Y6Y1 1673 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 RBM6P78332 1123 aaKnown RBP12.31□□□□□ -0.44
SNED1-211ENST00000491761 GRM1Q13255 1194 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 SLC39A14Q15043 492 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 RTN1Q16799 776 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 APOA5Q6Q788 366 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 ZHX3Q9H4I2 956 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 IMPACTQ9P2X3 320 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 SALL1Q9NSC2 1324 aa12.31□□□□□ -0.44
SNED1-211ENST00000491761 AFDNP55196 1824 aaKnown RBP12.31□□□□□ -0.44
SNED1-211ENST00000491761 SH2B2O14492 632 aaPredicted RBP12.3□□□□□ -0.44
SNED1-211ENST00000491761 LMOD1P29536 600 aaPredicted RBP12.3□□□□□ -0.44
SNED1-211ENST00000491761 TMTC2Q8N394 836 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 ARMT1Q9H993 441 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 GJB4Q9NTQ9 266 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 DACH1Q9UI36 760 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 ABCC6O95255 1503 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 MINDY4BA8MYZ0 360 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 ANTXR2P58335 489 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
SNED1-211ENST00000491761 CCDC144BQ3MJ40 725 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 ZFYVE27Q5T4F4 411 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 RDXP35241 583 aaKnown RBP12.3□□□□□ -0.44
SNED1-211ENST00000491761 ATP2B2Q01814 1243 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 ENOX2Q16206 610 aaKnown RBP12.3□□□□□ -0.44
SNED1-211ENST00000491761 CCDC43Q96MW1 224 aaKnown RBP12.3□□□□□ -0.44
SNED1-211ENST00000491761 MYL10Q9BUA6 226 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 CEP131Q9UPN4 1083 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 DPCR1Q3MIW9 517 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 TBC1D10CQ8IV04 446 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 IFNL3Q8IZI9 196 aa12.3□□□□□ -0.44
SNED1-211ENST00000491761 SRRTQ9BXP5 876 aaKnown RBP12.3□□□□□ -0.44
SNED1-211ENST00000491761 SOS2Q07890 1332 aaPredicted RBP12.29□□□□□ -0.44
SNED1-211ENST00000491761 LMAN1P49257 510 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 DEF6Q9H4E7 631 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 HPS5Q9UPZ3 1129 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 VGLL3A8MV65 326 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 ERVV-1B6SEH8 477 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 CUTAO60888 179 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 DHX40Q8IX18 779 aaKnown RBP12.29□□□□□ -0.44
SNED1-211ENST00000491761 ZNF512BQ96KM6 892 aaPredicted RBP12.29□□□□□ -0.44
SNED1-211ENST00000491761 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 SIPA1L3O60292 1781 aaPredicted RBP12.29□□□□□ -0.44
SNED1-211ENST00000491761 ADAMTSL3P82987 1691 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 TOP1P11387 765 aaKnown RBP12.29□□□□□ -0.44
SNED1-211ENST00000491761 IL6STP40189 918 aaPredicted RBP12.29□□□□□ -0.44
SNED1-211ENST00000491761 EPS15P42566 896 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 UBASH3AP57075 661 aa12.29□□□□□ -0.44
SNED1-211ENST00000491761 XPO4Q9C0E2 1151 aaKnown RBP12.29□□□□□ -0.44
SNED1-211ENST00000491761 CYP7A1P22680 504 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 TXLNAP40222 546 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 AKNAD1Q5T1N1 836 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 CYB5R4Q7L1T6 521 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 KRI1Q8N9T8 703 aaKnown RBP12.28□□□□□ -0.44
SNED1-211ENST00000491761 AIFM3Q96NN9 605 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 STRBPQ96SI9 672 aaKnown RBP12.28□□□□□ -0.44
SNED1-211ENST00000491761 COL5A2P05997 1499 aaPredicted RBP12.28□□□□□ -0.44
SNED1-211ENST00000491761 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
SNED1-211ENST00000491761 U2AF2P26368 475 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNED1-211ENST00000491761 TIGD1Q96MW7 591 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms