RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 TTC39AQ5SRH9 613 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 ZSCAN29Q8IWY8 852 aaPredicted RBP16.63■□□□□ 0.25
CDK9-204ENST00000491521 SLF2Q8IX21 1173 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 CLASRPQ8N2M8 674 aaKnown RBP16.63■□□□□ 0.25
CDK9-204ENST00000491521 SNRKQ9NRH2 765 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 RAI14Q9P0K7 980 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 LAMB1P07942 1786 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 RPAP1Q9BWH6 1393 aaPredicted RBP16.63■□□□□ 0.25
CDK9-204ENST00000491521 INPP5BP32019 993 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 MCAMP43121 646 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 GTF2A2P52657 109 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 SOX10P56693 466 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 TNNI3KQ59H18 835 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 BRI3BPQ8WY22 251 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 MS4A4AQ96JQ5 239 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 DBNDD2Q9BQY9 259 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 FPGT-TNNI3KV9GXZ4 949 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 MROH7-TTC4A0A0A0MT08 1334 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 GAKO14976 1311 aa16.62■□□□□ 0.25
CDK9-204ENST00000491521 PDS5AQ29RF7 1337 aaKnown RBP16.62■□□□□ 0.25
CDK9-204ENST00000491521 SPDYE5A6NIY4 337 aa16.61■□□□□ 0.25
CDK9-204ENST00000491521 UQCRFS1P1P0C7P4 283 aa16.61■□□□□ 0.25
CDK9-204ENST00000491521 ARID4AP29374 1257 aaPredicted RBP16.61■□□□□ 0.25
CDK9-204ENST00000491521 ERO1BQ86YB8 467 aa16.61■□□□□ 0.25
CDK9-204ENST00000491521 CFHR5Q9BXR6 569 aa16.61■□□□□ 0.25
CDK9-204ENST00000491521 HPS5Q9UPZ3 1129 aa16.61■□□□□ 0.25
CDK9-204ENST00000491521 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
CDK9-204ENST00000491521 IFIT2P09913 472 aaKnown RBP16.6■□□□□ 0.25
CDK9-204ENST00000491521 CCDC8Q9H0W5 538 aaPredicted RBP16.6■□□□□ 0.25
CDK9-204ENST00000491521 LRP2BPQ9P2M1 347 aa16.6■□□□□ 0.25
CDK9-204ENST00000491521 TESPA1A2RU30 521 aaPredicted RBP16.59■□□□□ 0.25
CDK9-204ENST00000491521 IRF6O14896 467 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 SLURP2P0DP57 97 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 GSTO1P78417 241 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 SNAPC2Q13487 334 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 TAF1CQ15572 869 aaPredicted RBP16.59■□□□□ 0.25
CDK9-204ENST00000491521 NOM1Q5C9Z4 860 aaKnown RBP16.59■□□□□ 0.25
CDK9-204ENST00000491521 CCDC158Q5M9N0 1113 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 AACSQ86V21 672 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 CD99L2Q8TCZ2 262 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 ZNF384Q8TF68 577 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 DDX4Q9NQI0 724 aaKnown RBP16.59■□□□□ 0.25
CDK9-204ENST00000491521 TLR7Q9NYK1 1049 aaKnown RBP16.59■□□□□ 0.25
CDK9-204ENST00000491521 TRIM17Q9Y577 477 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 HTTP42858 3142 aa16.59■□□□□ 0.25
CDK9-204ENST00000491521 ZBTB22O15209 634 aa16.58■□□□□ 0.24
CDK9-204ENST00000491521 WDHD1O75717 1129 aaPredicted RBP16.58■□□□□ 0.24
CDK9-204ENST00000491521 CETPP11597 493 aa16.58■□□□□ 0.24
CDK9-204ENST00000491521 PPIL2Q13356 520 aa16.58■□□□□ 0.24
CDK9-204ENST00000491521 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
CDK9-204ENST00000491521 SH3BP5LQ7L8J4 393 aa16.58■□□□□ 0.24
CDK9-204ENST00000491521 SKAP1Q86WV1 359 aa16.58■□□□□ 0.24
CDK9-204ENST00000491521 NSUN4Q96CB9 384 aaKnown RBP16.58■□□□□ 0.24
CDK9-204ENST00000491521 IDI2Q9BXS1 227 aa16.58■□□□□ 0.24
CDK9-204ENST00000491521 GPR108Q9NPR9 543 aa16.58■□□□□ 0.24
CDK9-204ENST00000491521 CENPFP49454 3210 aa16.58■□□□□ 0.24
CDK9-204ENST00000491521 GPR75-ASB3A0A0A6YYF3 556 aa16.57■□□□□ 0.24
CDK9-204ENST00000491521 DDTLA6NHG4 134 aaPredicted RBP16.57■□□□□ 0.24
CDK9-204ENST00000491521 ENTPD3O75355 529 aa16.57■□□□□ 0.24
CDK9-204ENST00000491521 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
CDK9-204ENST00000491521 LDHCP07864 332 aa16.57■□□□□ 0.24
CDK9-204ENST00000491521 MLLT1Q03111 559 aaPredicted RBP16.57■□□□□ 0.24
CDK9-204ENST00000491521 EAF2Q96CJ1 260 aaPredicted RBP16.57■□□□□ 0.24
CDK9-204ENST00000491521 FAM163AQ96GL9 167 aaPredicted RBP16.57■□□□□ 0.24
CDK9-204ENST00000491521 ZFYVE28Q9HCC9 887 aa16.57■□□□□ 0.24
CDK9-204ENST00000491521 DBNLQ9UJU6 430 aaKnown RBP16.57■□□□□ 0.24
CDK9-204ENST00000491521 TNRC18O15417 2968 aaPredicted RBP16.57■□□□□ 0.24
CDK9-204ENST00000491521 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
CDK9-204ENST00000491521 RFX7Q2KHR2 1363 aa16.56■□□□□ 0.24
CDK9-204ENST00000491521 BTBD19C9JJ37 291 aa16.56■□□□□ 0.24
CDK9-204ENST00000491521 PDE4AP27815 886 aa16.56■□□□□ 0.24
CDK9-204ENST00000491521 RHBDL3P58872 404 aa16.56■□□□□ 0.24
CDK9-204ENST00000491521 SP3Q02447 781 aa16.56■□□□□ 0.24
CDK9-204ENST00000491521 FBXO46Q6PJ61 603 aaPredicted RBP16.56■□□□□ 0.24
CDK9-204ENST00000491521 TEX11Q8IYF3 940 aa16.56■□□□□ 0.24
CDK9-204ENST00000491521 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
CDK9-204ENST00000491521 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
CDK9-204ENST00000491521 ZNF112Q9UJU3 913 aa16.56■□□□□ 0.24
CDK9-204ENST00000491521 FAM196BA6NMK8 535 aa16.55■□□□□ 0.24
CDK9-204ENST00000491521 ZAP70P43403 619 aa16.55■□□□□ 0.24
CDK9-204ENST00000491521 PPATQ06203 517 aa16.55■□□□□ 0.24
CDK9-204ENST00000491521 NAA16Q6N069 864 aaPredicted RBP16.55■□□□□ 0.24
CDK9-204ENST00000491521 OTOP1Q7RTM1 612 aa16.55■□□□□ 0.24
CDK9-204ENST00000491521 OTUD7AQ8TE49 926 aaPredicted RBP16.55■□□□□ 0.24
CDK9-204ENST00000491521 SH3RF3Q8TEJ3 882 aaPredicted RBP16.55■□□□□ 0.24
CDK9-204ENST00000491521 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
CDK9-204ENST00000491521 PICK1Q9NRD5 415 aa16.55■□□□□ 0.24
CDK9-204ENST00000491521 MAST2Q6P0Q8 1798 aa16.54■□□□□ 0.24
CDK9-204ENST00000491521 CYP2E1P05181 493 aaPredicted RBP16.54■□□□□ 0.24
CDK9-204ENST00000491521 EFCC1Q9HA90 598 aa16.54■□□□□ 0.24
CDK9-204ENST00000491521 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
CDK9-204ENST00000491521 AATFQ9NY61 560 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDK9-204ENST00000491521 NDUFB9Q9Y6M9 179 aa16.54■□□□□ 0.24
CDK9-204ENST00000491521 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
CDK9-204ENST00000491521 PHF20L1A8MW92 1017 aa16.53■□□□□ 0.24
CDK9-204ENST00000491521 MX1P20591 662 aa16.53■□□□□ 0.24
CDK9-204ENST00000491521 NOL9Q5SY16 702 aaKnown RBP16.53■□□□□ 0.24
CDK9-204ENST00000491521 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.53■□□□□ 0.24
CDK9-204ENST00000491521 RGS19P49795 217 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms