RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ZFPM1Q8IX07 1006 aa25.73■■□□□ 1.71
CLIP2-208ENST00000491075 ZGPATQ8N5A5 531 aaKnown RBP25.73■■□□□ 1.71
CLIP2-208ENST00000491075 IDI2Q9BXS1 227 aa25.73■■□□□ 1.71
CLIP2-208ENST00000491075 SIL1Q9H173 461 aa25.73■■□□□ 1.71
CLIP2-208ENST00000491075 RBM27Q9P2N5 1060 aaKnown RBP25.73■■□□□ 1.71
CLIP2-208ENST00000491075 RFX7Q2KHR2 1363 aa25.72■■□□□ 1.71
CLIP2-208ENST00000491075 E9PSI1 815 aa25.72■■□□□ 1.71
CLIP2-208ENST00000491075 ZBTB22O15209 634 aa25.72■■□□□ 1.71
CLIP2-208ENST00000491075 RGS3P49796 1198 aa25.72■■□□□ 1.71
CLIP2-208ENST00000491075 SLC45A1Q9Y2W3 748 aa25.72■■□□□ 1.71
CLIP2-208ENST00000491075 ZHX2Q9Y6X8 837 aa25.72■■□□□ 1.71
CLIP2-208ENST00000491075 GAKO14976 1311 aa25.71■■□□□ 1.71
CLIP2-208ENST00000491075 UBTFL1P0CB47 393 aaPredicted RBP25.71■■□□□ 1.71
CLIP2-208ENST00000491075 PTPRAP18433 802 aa25.71■■□□□ 1.71
CLIP2-208ENST00000491075 PHKA1P46020 1223 aa25.71■■□□□ 1.71
CLIP2-208ENST00000491075 U2AF1L4Q8WU68 220 aaKnown RBP25.71■■□□□ 1.71
CLIP2-208ENST00000491075 GABRQQ9UN88 632 aa25.71■■□□□ 1.71
CLIP2-208ENST00000491075 NR2E3Q9Y5X4 410 aa25.71■■□□□ 1.71
CLIP2-208ENST00000491075 FARP2O94887 1054 aaPredicted RBP25.7■■□□□ 1.7
CLIP2-208ENST00000491075 ALDH1L2Q3SY69 923 aa25.7■■□□□ 1.7
CLIP2-208ENST00000491075 AFG3L2Q9Y4W6 797 aa25.7■■□□□ 1.7
CLIP2-208ENST00000491075 IL15P40933 162 aaPredicted RBP25.69■■□□□ 1.7
CLIP2-208ENST00000491075 GADL1Q6ZQY3 521 aa25.69■■□□□ 1.7
CLIP2-208ENST00000491075 ZSCAN29Q8IWY8 852 aaPredicted RBP25.69■■□□□ 1.7
CLIP2-208ENST00000491075 UNC93B1Q9H1C4 597 aa25.69■■□□□ 1.7
CLIP2-208ENST00000491075 LRRFIP2Q9Y608 721 aaKnown RBP25.69■■□□□ 1.7
CLIP2-208ENST00000491075 ADCY3O60266 1144 aa25.68■■□□□ 1.7
CLIP2-208ENST00000491075 CAPN2P17655 700 aa25.68■■□□□ 1.7
CLIP2-208ENST00000491075 MAP3K10Q02779 954 aa25.68■■□□□ 1.7
CLIP2-208ENST00000491075 DZIP1Q86YF9 867 aaKnown RBP25.68■■□□□ 1.7
CLIP2-208ENST00000491075 SLF2Q8IX21 1173 aa25.68■■□□□ 1.7
CLIP2-208ENST00000491075 PDS5AQ29RF7 1337 aaKnown RBP25.67■■□□□ 1.7
CLIP2-208ENST00000491075 SGPL1O95470 568 aa25.67■■□□□ 1.7
CLIP2-208ENST00000491075 FLT3LGP49771 235 aa25.67■■□□□ 1.7
CLIP2-208ENST00000491075 PXYLP1Q8TE99 480 aa25.67■■□□□ 1.7
CLIP2-208ENST00000491075 SMCR8Q8TEV9 937 aaPredicted RBP25.67■■□□□ 1.7
CLIP2-208ENST00000491075 PRO3102Q9H379 93 aa25.67■■□□□ 1.7
CLIP2-208ENST00000491075 TNPO2O14787 897 aaKnown RBP25.66■■□□□ 1.7
CLIP2-208ENST00000491075 CTNND1O60716 968 aaKnown RBP25.66■■□□□ 1.7
CLIP2-208ENST00000491075 IRF5Q13568 498 aa25.66■■□□□ 1.7
CLIP2-208ENST00000491075 CCDC102BQ68D86 513 aa25.66■■□□□ 1.7
CLIP2-208ENST00000491075 SH3BP5LQ7L8J4 393 aa25.66■■□□□ 1.7
CLIP2-208ENST00000491075 SMC4Q9NTJ3 1288 aa25.66■■□□□ 1.7
CLIP2-208ENST00000491075 HDAC5Q9UQL6 1122 aa25.66■■□□□ 1.7
CLIP2-208ENST00000491075 INHAP05111 366 aa25.65■■□□□ 1.7
CLIP2-208ENST00000491075 FAM163AQ96GL9 167 aaPredicted RBP25.65■■□□□ 1.7
CLIP2-208ENST00000491075 ATAD5Q96QE3 1844 aa25.65■■□□□ 1.7
CLIP2-208ENST00000491075 LOC285556D6RIA3 1793 aa25.64■■□□□ 1.7
CLIP2-208ENST00000491075 DDTLA6NHG4 134 aaPredicted RBP25.64■■□□□ 1.7
CLIP2-208ENST00000491075 ZBTB7BO15156 539 aaPredicted RBP25.64■■□□□ 1.7
CLIP2-208ENST00000491075 ELNP15502 786 aa25.64■■□□□ 1.7
CLIP2-208ENST00000491075 ADORA1P30542 326 aa25.64■■□□□ 1.7
CLIP2-208ENST00000491075 RASGRF1Q13972 1273 aa25.64■■□□□ 1.7
CLIP2-208ENST00000491075 SPTY2D1Q68D10 685 aaPredicted RBP25.64■■□□□ 1.7
CLIP2-208ENST00000491075 ABCF2Q9UG63 623 aa25.64■■□□□ 1.7
CLIP2-208ENST00000491075 AGTPBP1Q9UPW5 1226 aa25.64■■□□□ 1.7
CLIP2-208ENST00000491075 DOCK3Q8IZD9 2030 aa25.64■■□□□ 1.69
CLIP2-208ENST00000491075 TRIM75PA6NK02 468 aa25.63■■□□□ 1.69
CLIP2-208ENST00000491075 SLFN5Q08AF3 891 aa25.63■■□□□ 1.69
CLIP2-208ENST00000491075 COPRSQ9NQ92 184 aa25.63■■□□□ 1.69
CLIP2-208ENST00000491075 DDX4Q9NQI0 724 aaKnown RBP25.63■■□□□ 1.69
CLIP2-208ENST00000491075 PA2G4Q9UQ80 394 aaKnown RBP25.63■■□□□ 1.69
CLIP2-208ENST00000491075 MROH7-TTC4A0A0A0MT08 1334 aa25.63■■□□□ 1.69
CLIP2-208ENST00000491075 BTDP43251 543 aa25.62■■□□□ 1.69
CLIP2-208ENST00000491075 PICALMQ13492 652 aa25.62■■□□□ 1.69
CLIP2-208ENST00000491075 PNMA3Q9UL41 463 aa25.62■■□□□ 1.69
CLIP2-208ENST00000491075 ALPK3Q96L96 1907 aa25.61■■□□□ 1.69
CLIP2-208ENST00000491075 A0A1W2PPC1 479 aa25.61■■□□□ 1.69
CLIP2-208ENST00000491075 ZNF316A6NFI3 1004 aaPredicted RBP25.61■■□□□ 1.69
CLIP2-208ENST00000491075 COA7Q96BR5 231 aa25.61■■□□□ 1.69
CLIP2-208ENST00000491075 DEFB118Q96PH6 123 aa25.61■■□□□ 1.69
CLIP2-208ENST00000491075 PAK6Q9NQU5 681 aaPredicted RBP25.61■■□□□ 1.69
CLIP2-208ENST00000491075 EVI5O60447 810 aa25.6■■□□□ 1.69
CLIP2-208ENST00000491075 TFRCP02786 760 aaKnown RBP25.6■■□□□ 1.69
CLIP2-208ENST00000491075 FAM110CQ1W6H9 321 aa25.6■■□□□ 1.69
CLIP2-208ENST00000491075 TBC1D12O60347 775 aa25.59■■□□□ 1.69
CLIP2-208ENST00000491075 NPM3O75607 178 aaKnown RBP25.59■■□□□ 1.69
CLIP2-208ENST00000491075 SLURP2P0DP57 97 aa25.59■■□□□ 1.69
CLIP2-208ENST00000491075 ANKRD13CQ8N6S4 541 aa25.59■■□□□ 1.69
CLIP2-208ENST00000491075 PROCA1Q8NCQ7 364 aaPredicted RBP25.59■■□□□ 1.69
CLIP2-208ENST00000491075 COL2A1P02458 1487 aaPredicted RBP25.59■■□□□ 1.69
CLIP2-208ENST00000491075 GPR75-ASB3A0A0A6YYF3 556 aa25.58■■□□□ 1.69
CLIP2-208ENST00000491075 TIMM10P62072 90 aa25.58■■□□□ 1.69
CLIP2-208ENST00000491075 MVPQ14764 893 aaKnown RBP25.58■■□□□ 1.69
CLIP2-208ENST00000491075 ERICH6Q7L0X2 663 aa25.58■■□□□ 1.69
CLIP2-208ENST00000491075 CRISPLD2Q9H0B8 497 aa25.58■■□□□ 1.69
CLIP2-208ENST00000491075 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.58■■□□□ 1.69
CLIP2-208ENST00000491075 TAOK2Q9UL54 1235 aa25.58■■□□□ 1.69
CLIP2-208ENST00000491075 RHBDL3P58872 404 aa25.57■■□□□ 1.68
CLIP2-208ENST00000491075 MECOMQ03112 1051 aa25.57■■□□□ 1.68
CLIP2-208ENST00000491075 TREML2Q5T2D2 321 aa25.57■■□□□ 1.68
CLIP2-208ENST00000491075 CCDC84Q86UT8 332 aaPredicted RBP25.57■■□□□ 1.68
CLIP2-208ENST00000491075 TBC1D2Q9BYX2 928 aa25.57■■□□□ 1.68
CLIP2-208ENST00000491075 API5Q9BZZ5 524 aaKnown RBP25.57■■□□□ 1.68
CLIP2-208ENST00000491075 OSBPL5Q9H0X9 879 aaPredicted RBP25.57■■□□□ 1.68
CLIP2-208ENST00000491075 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.57■■□□□ 1.68
CLIP2-208ENST00000491075 AKAP2Q9Y2D5 859 aa25.57■■□□□ 1.68
CLIP2-208ENST00000491075 A0A1B0GUL7 405 aa25.56■■□□□ 1.68
CLIP2-208ENST00000491075 MAP4K4O95819 1239 aaPredicted RBP25.56■■□□□ 1.68
CLIP2-208ENST00000491075 CT47B1P0C2W7 299 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms