RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TMED8Q6PL24 325 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-206ENST00000490831 MIGA2Q7L4E1 593 aa18.59■□□□□ 0.57
COL27A1-206ENST00000490831 SH3BP5LQ7L8J4 393 aa18.59■□□□□ 0.57
COL27A1-206ENST00000490831 IFNL1Q8IU54 200 aa18.59■□□□□ 0.57
COL27A1-206ENST00000490831 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.59■□□□□ 0.57
COL27A1-206ENST00000490831 MS4A4AQ96JQ5 239 aa18.59■□□□□ 0.57
COL27A1-206ENST00000490831 ERO1BQ86YB8 467 aa18.58■□□□□ 0.56
COL27A1-206ENST00000490831 YTHDC1Q96MU7 727 aaKnown RBP18.58■□□□□ 0.56
COL27A1-206ENST00000490831 MYO5AQ9Y4I1 1855 aaKnown RBP18.58■□□□□ 0.56
COL27A1-206ENST00000490831 DDTLA6NHG4 134 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-206ENST00000490831 IGF2BP3O00425 579 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL27A1-206ENST00000490831 NOL9Q5SY16 702 aaKnown RBP18.57■□□□□ 0.56
COL27A1-206ENST00000490831 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
COL27A1-206ENST00000490831 ZKSCAN4Q969J2 545 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-206ENST00000490831 DOCK2Q92608 1830 aa18.57■□□□□ 0.56
COL27A1-206ENST00000490831 AK9Q5TCS8 1911 aa18.57■□□□□ 0.56
COL27A1-206ENST00000490831 PHF20L1A8MW92 1017 aa18.56■□□□□ 0.56
COL27A1-206ENST00000490831 APBB1O00213 710 aa18.56■□□□□ 0.56
COL27A1-206ENST00000490831 BAG3O95817 575 aa18.56■□□□□ 0.56
COL27A1-206ENST00000490831 IFIT2P09913 472 aaKnown RBP18.56■□□□□ 0.56
COL27A1-206ENST00000490831 PLCG2P16885 1265 aa18.56■□□□□ 0.56
COL27A1-206ENST00000490831 INPP5BP32019 993 aa18.56■□□□□ 0.56
COL27A1-206ENST00000490831 ADGRA1Q86SQ6 560 aa18.56■□□□□ 0.56
COL27A1-206ENST00000490831 DCTPP1Q9H773 170 aa18.56■□□□□ 0.56
COL27A1-206ENST00000490831 TBC1D12O60347 775 aa18.55■□□□□ 0.56
COL27A1-206ENST00000490831 TBC1D8O95759 1140 aa18.55■□□□□ 0.56
COL27A1-206ENST00000490831 GTF2A2P52657 109 aa18.55■□□□□ 0.56
COL27A1-206ENST00000490831 PPIL2Q13356 520 aa18.55■□□□□ 0.56
COL27A1-206ENST00000490831 PICALMQ13492 652 aa18.55■□□□□ 0.56
COL27A1-206ENST00000490831 SH3RF3Q8TEJ3 882 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-206ENST00000490831 OTUD5Q96G74 571 aa18.55■□□□□ 0.56
COL27A1-206ENST00000490831 PTPN18Q99952 460 aa18.55■□□□□ 0.56
COL27A1-206ENST00000490831 NOL10Q9BSC4 688 aaKnown RBP18.55■□□□□ 0.56
COL27A1-206ENST00000490831 LRRCC1Q9C099 1032 aa18.55■□□□□ 0.56
COL27A1-206ENST00000490831 OSBPL5Q9H0X9 879 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-206ENST00000490831 ANTXR1Q9H6X2 564 aa18.55■□□□□ 0.56
COL27A1-206ENST00000490831 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-206ENST00000490831 PPATQ06203 517 aa18.54■□□□□ 0.56
COL27A1-206ENST00000490831 TTF1Q15361 905 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-206ENST00000490831 TEX11Q8IYF3 940 aa18.54■□□□□ 0.56
COL27A1-206ENST00000490831 BRI3BPQ8WY22 251 aa18.54■□□□□ 0.56
COL27A1-206ENST00000490831 AATFQ9NY61 560 aaKnown RBP eCLIP18.54■□□□□ 0.56
COL27A1-206ENST00000490831 NDUFB9Q9Y6M9 179 aa18.54■□□□□ 0.56
COL27A1-206ENST00000490831 GPR25O00155 361 aa18.53■□□□□ 0.56
COL27A1-206ENST00000490831 IRF6O14896 467 aa18.53■□□□□ 0.56
COL27A1-206ENST00000490831 IDH1O75874 414 aaKnown RBP18.53■□□□□ 0.56
COL27A1-206ENST00000490831 ATP5JP18859 108 aa18.53■□□□□ 0.56
COL27A1-206ENST00000490831 MAP3K12Q12852 859 aa18.53■□□□□ 0.56
COL27A1-206ENST00000490831 OTUD7BQ6GQQ9 843 aa18.53■□□□□ 0.56
COL27A1-206ENST00000490831 CERS3Q8IU89 383 aa18.53■□□□□ 0.56
COL27A1-206ENST00000490831 ZSCAN29Q8IWY8 852 aaPredicted RBP18.53■□□□□ 0.56
COL27A1-206ENST00000490831 R3HDMLQ9H3Y0 253 aa18.53■□□□□ 0.56
COL27A1-206ENST00000490831 PCDHB15Q9Y5E8 787 aa18.53■□□□□ 0.56
COL27A1-206ENST00000490831 FOCADQ5VW36 1801 aa18.52■□□□□ 0.56
COL27A1-206ENST00000490831 CYP7A1P22680 504 aa18.52■□□□□ 0.56
COL27A1-206ENST00000490831 ZNF296Q8WUU4 475 aaPredicted RBP18.52■□□□□ 0.56
COL27A1-206ENST00000490831 KCNH4Q9UQ05 1017 aa18.52■□□□□ 0.56
COL27A1-206ENST00000490831 CCL15-CCL14A0A0B4J2E2 113 aa18.51■□□□□ 0.55
COL27A1-206ENST00000490831 CETPP11597 493 aa18.51■□□□□ 0.55
COL27A1-206ENST00000490831 SNAPC2Q13487 334 aa18.51■□□□□ 0.55
COL27A1-206ENST00000490831 CCL15Q16663 113 aa18.51■□□□□ 0.55
COL27A1-206ENST00000490831 MAGEB6Q8N7X4 407 aa18.51■□□□□ 0.55
COL27A1-206ENST00000490831 MCOLN1Q9GZU1 580 aa18.51■□□□□ 0.55
COL27A1-206ENST00000490831 DHX36Q9H2U1 1008 aaKnown RBP18.51■□□□□ 0.55
COL27A1-206ENST00000490831 ZCCHC17Q9NP64 241 aaKnown RBP18.51■□□□□ 0.55
COL27A1-206ENST00000490831 CDK5RAP2Q96SN8 1893 aa18.51■□□□□ 0.55
COL27A1-206ENST00000490831 CTNND1O60716 968 aaKnown RBP18.5■□□□□ 0.55
COL27A1-206ENST00000490831 SCYL3Q8IZE3 742 aa18.5■□□□□ 0.55
COL27A1-206ENST00000490831 ABHD8Q96I13 439 aa18.5■□□□□ 0.55
COL27A1-206ENST00000490831 FLT1P17948 1338 aa18.49■□□□□ 0.55
COL27A1-206ENST00000490831 SMARCA5O60264 1052 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-206ENST00000490831 SLURP2P0DP57 97 aa18.49■□□□□ 0.55
COL27A1-206ENST00000490831 DYNLL1P63167 89 aaKnown RBP18.49■□□□□ 0.55
COL27A1-206ENST00000490831 CRHR2Q13324 411 aa18.49■□□□□ 0.55
COL27A1-206ENST00000490831 DGKZQ13574 1117 aa18.49■□□□□ 0.55
COL27A1-206ENST00000490831 CTU1Q7Z7A3 348 aaKnown RBP18.49■□□□□ 0.55
COL27A1-206ENST00000490831 METTL16Q86W50 562 aaKnown RBP18.49■□□□□ 0.55
COL27A1-206ENST00000490831 TGFBRAP1Q8WUH2 860 aa18.49■□□□□ 0.55
COL27A1-206ENST00000490831 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
COL27A1-206ENST00000490831 HAUS7Q99871 368 aa18.49■□□□□ 0.55
COL27A1-206ENST00000490831 HERC5Q9UII4 1024 aaKnown RBP18.49■□□□□ 0.55
COL27A1-206ENST00000490831 GOLIM4O00461 696 aa18.48■□□□□ 0.55
COL27A1-206ENST00000490831 FKTNO75072 461 aa18.48■□□□□ 0.55
COL27A1-206ENST00000490831 PDE6AP16499 860 aa18.48■□□□□ 0.55
COL27A1-206ENST00000490831 PTPRAP18433 802 aa18.48■□□□□ 0.55
COL27A1-206ENST00000490831 FAM43AQ8N2R8 423 aa18.48■□□□□ 0.55
COL27A1-206ENST00000490831 DNAJC2Q99543 621 aaKnown RBP18.48■□□□□ 0.55
COL27A1-206ENST00000490831 RIOK1Q9BRS2 568 aaKnown RBP18.48■□□□□ 0.55
COL27A1-206ENST00000490831 PAG1Q9NWQ8 432 aa18.48■□□□□ 0.55
COL27A1-206ENST00000490831 PI4KBQ9UBF8 816 aa18.48■□□□□ 0.55
COL27A1-206ENST00000490831 SIPA1L1O43166 1804 aa18.48■□□□□ 0.55
COL27A1-206ENST00000490831 DOCK1Q14185 1865 aa18.48■□□□□ 0.55
COL27A1-206ENST00000490831 TCRBV5S4A2TA0A5A2 114 aa18.47■□□□□ 0.55
COL27A1-206ENST00000490831 BTBD19C9JJ37 291 aa18.47■□□□□ 0.55
COL27A1-206ENST00000490831 CXCL11O14625 94 aa18.47■□□□□ 0.55
COL27A1-206ENST00000490831 AAMPQ13685 434 aa18.47■□□□□ 0.55
COL27A1-206ENST00000490831 MOGSQ13724 837 aa18.47■□□□□ 0.55
COL27A1-206ENST00000490831 SLC9C2Q5TAH2 1124 aa18.47■□□□□ 0.55
COL27A1-206ENST00000490831 MAPKAPK5Q8IW41 473 aa18.47■□□□□ 0.55
COL27A1-206ENST00000490831 MIGA1Q8NAN2 632 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms