RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 H0YHG0 523 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 M0R2C6 588 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 A1BGP04217 495 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 SARNPP82979 210 aaKnown RBP11.63□□□□□ -0.55
BRD9-209ENST00000490814 CCDC158Q5M9N0 1113 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 PPM1EQ8WY54 764 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 TMOD3Q9NYL9 352 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 PHKG2P15735 406 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 ZKSCAN8Q15776 578 aaPredicted RBP11.63□□□□□ -0.55
BRD9-209ENST00000490814 PI16Q6UXB8 463 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 CCDC82Q8N4S0 544 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 MARCH10Q8NA82 808 aaPredicted RBP11.63□□□□□ -0.55
BRD9-209ENST00000490814 CCDC150Q8NCX0 1101 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 AIFM3Q96NN9 605 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 UTP14AQ9BVJ6 771 aaKnown RBP11.63□□□□□ -0.55
BRD9-209ENST00000490814 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
BRD9-209ENST00000490814 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 SPATA31A5Q5VU36 1347 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 SPATA31A7Q8IWB4 1347 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 ZNF202O95125 648 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 APBA3O96018 575 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 ETF1P62495 437 aaKnown RBP11.63□□□□□ -0.55
BRD9-209ENST00000490814 CCDC57Q2TAC2 916 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 ARMCX5Q6P1M9 558 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 DEFB132Q7Z7B7 95 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 MICU3Q86XE3 530 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 JMYQ8N9B5 988 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 OSBP2Q969R2 916 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 AK7Q96M32 723 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 HELLSQ9NRZ9 838 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 CAMTA1Q9Y6Y1 1673 aa11.63□□□□□ -0.55
BRD9-209ENST00000490814 KIF3CO14782 793 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 ATP1A3P13637 1013 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 CEP89Q96ST8 783 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 ADORA1P30542 326 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 SETQ01105 290 aaPredicted RBP11.62□□□□□ -0.55
BRD9-209ENST00000490814 SMC1AQ14683 1233 aaKnown RBP11.62□□□□□ -0.55
BRD9-209ENST00000490814 ADALQ6DHV7 355 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 MMS22LQ6ZRQ5 1243 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 PSMD1Q99460 953 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 IDH1O75874 414 aaKnown RBP11.62□□□□□ -0.55
BRD9-209ENST00000490814 SPECC1Q5M775 1068 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 ZMYM1Q5SVZ6 1142 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 KCNG4Q8TDN1 519 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 DSCC1Q9BVC3 393 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 L2HGDHQ9H9P8 463 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
BRD9-209ENST00000490814 LRRC37A3O60309 1634 aa11.62□□□□□ -0.55
BRD9-209ENST00000490814 MED1Q15648 1581 aaPredicted RBP11.61□□□□□ -0.55
BRD9-209ENST00000490814 ZNF213O14771 459 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 FDPSP14324 419 aaKnown RBP11.61□□□□□ -0.55
BRD9-209ENST00000490814 IL15P40933 162 aaPredicted RBP11.61□□□□□ -0.55
BRD9-209ENST00000490814 SKIDA1Q1XH10 827 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 MAP9Q49MG5 647 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 FMR1NBQ8N0W7 255 aaPredicted RBP11.61□□□□□ -0.55
BRD9-209ENST00000490814 LINC00301Q8NCQ3 95 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 ENGASEQ8NFI3 743 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 BSDC1Q9NW68 430 aaPredicted RBP11.61□□□□□ -0.55
BRD9-209ENST00000490814 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 SYKP43405 635 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 GNG11P61952 73 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 MYSM1Q5VVJ2 828 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 PLBD2Q8NHP8 589 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 PHKBQ93100 1093 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 EYA2O00167 538 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 FGAP02671 866 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 PFKFB1P16118 471 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 UBASH3AP57075 661 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 EXOSC10Q01780 885 aaKnown RBP11.61□□□□□ -0.55
BRD9-209ENST00000490814 MYL10Q9BUA6 226 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 IMPACTQ9P2X3 320 aa11.61□□□□□ -0.55
BRD9-209ENST00000490814 PSDA5PKW4 1024 aaPredicted RBP11.6□□□□□ -0.55
BRD9-209ENST00000490814 TRIM29Q14134 588 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 OTUD6BQ8N6M0 293 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 ZNF274Q96GC6 653 aaPredicted RBP11.6□□□□□ -0.55
BRD9-209ENST00000490814 ALG1Q9BT22 464 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 ARFGAP3Q9NP61 516 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 FANCCQ00597 558 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 RRP12Q5JTH9 1297 aaKnown RBP11.6□□□□□ -0.55
BRD9-209ENST00000490814 ANO1Q5XXA6 986 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 OLFM4Q6UX06 510 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 CLIC6Q96NY7 704 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
BRD9-209ENST00000490814 RTEL1Q9NZ71 1219 aa11.6□□□□□ -0.55
BRD9-209ENST00000490814 KLHL33A6NCF5 533 aa11.59□□□□□ -0.55
BRD9-209ENST00000490814 ZAP70P43403 619 aa11.59□□□□□ -0.55
BRD9-209ENST00000490814 PNOCQ13519 176 aa11.59□□□□□ -0.55
BRD9-209ENST00000490814 ATG9AQ7Z3C6 839 aa11.59□□□□□ -0.55
BRD9-209ENST00000490814 ZNF513Q8N8E2 541 aaPredicted RBP11.59□□□□□ -0.55
BRD9-209ENST00000490814 NCOA7Q8NI08 942 aa11.59□□□□□ -0.55
BRD9-209ENST00000490814 EIF3CLB5ME19 914 aaKnown RBP11.59□□□□□ -0.55
BRD9-209ENST00000490814 KIF28PB7ZC32 967 aa11.59□□□□□ -0.55
BRD9-209ENST00000490814 CCP110O43303 1012 aa11.59□□□□□ -0.55
BRD9-209ENST00000490814 MCM6Q14566 821 aa11.59□□□□□ -0.55
BRD9-209ENST00000490814 LRRFIP1Q32MZ4 808 aaKnown RBP11.59□□□□□ -0.55
BRD9-209ENST00000490814 CPLX2Q6PUV4 134 aaKnown RBP11.59□□□□□ -0.55
BRD9-209ENST00000490814 EIF3CQ99613 913 aaKnown RBP11.59□□□□□ -0.55
BRD9-209ENST00000490814 DENND2AQ9ULE3 1009 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms