RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 SMYD4Q8IYR2 804 aaPredicted RBP14.53□□□□□ -0.08
SHOX2-205ENST00000490689 SLC4A4Q9Y6R1 1079 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 GOLGA6L7A0A1B0GV03 622 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 CCDC194A0A1B0GVG4 234 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 ACTN2P35609 894 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 SF3A3Q12874 501 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHOX2-205ENST00000490689 SAMSN1Q9NSI8 373 aaKnown RBP14.53□□□□□ -0.08
SHOX2-205ENST00000490689 PHLPP2Q6ZVD8 1323 aa14.53□□□□□ -0.08
SHOX2-205ENST00000490689 GOLGA6CA6NDK9 693 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 GOLGA6DP0CG33 693 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 STAT6P42226 847 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 ARID5AQ03989 594 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 SLC35F6Q8N357 371 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 CCDC42Q96M95 316 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 HAUS7Q99871 368 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 DSCC1Q9BVC3 393 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 GOLGA6AQ9NYA3 693 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 CDK12Q9NYV4 1490 aaPredicted RBP14.52□□□□□ -0.08
SHOX2-205ENST00000490689 ZFYVE16Q7Z3T8 1539 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 TET3O43151 1660 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 IQGAP1P46940 1657 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 GCP02774 474 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 SPAG1Q07617 926 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 LRRC24Q50LG9 513 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 CC2D1AQ6P1N0 951 aaPredicted RBP14.52□□□□□ -0.08
SHOX2-205ENST00000490689 TICAM2Q86XR7 235 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 PPM1EQ8WY54 764 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 DPF2Q92785 391 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 XAGE2Q96GT9 111 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 MMRN2Q9H8L6 949 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 FAM204AQ9H8W3 233 aa14.52□□□□□ -0.08
SHOX2-205ENST00000490689 QRICH2Q9H0J4 1663 aa14.52□□□□□ -0.09
SHOX2-205ENST00000490689 NDUFAB1O14561 156 aa14.52□□□□□ -0.09
SHOX2-205ENST00000490689 KCNA6P17658 529 aa14.52□□□□□ -0.09
SHOX2-205ENST00000490689 CDC5LQ99459 802 aaKnown RBP14.52□□□□□ -0.09
SHOX2-205ENST00000490689 STX10O60499 249 aa14.52□□□□□ -0.09
SHOX2-205ENST00000490689 TOGARAM2Q6ZUX3 1019 aa14.52□□□□□ -0.09
SHOX2-205ENST00000490689 FMR1NBQ8N0W7 255 aaPredicted RBP14.52□□□□□ -0.09
SHOX2-205ENST00000490689 TTF2Q9UNY4 1162 aaKnown RBP14.52□□□□□ -0.09
SHOX2-205ENST00000490689 IGSF1Q8N6C5 1336 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 CTDSPL2Q05D32 466 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 SLC39A14Q15043 492 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 EPHA10Q5JZY3 1008 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 SND1Q7KZF4 910 aaKnown RBP eCLIP14.51□□□□□ -0.09
SHOX2-205ENST00000490689 SRGAP1Q7Z6B7 1085 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 ALS2CR12Q96Q35 445 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 WDR24Q96S15 920 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 GNL3LQ9NVN8 582 aaKnown RBP14.51□□□□□ -0.09
SHOX2-205ENST00000490689 ABCC3O15438 1527 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 CABLES1Q8TDN4 633 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 SEPT11Q9NVA2 429 aaKnown RBP14.51□□□□□ -0.09
SHOX2-205ENST00000490689 CASP14P31944 242 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 RILPL1Q5EBL4 403 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 CT47A1Q5JQC4 288 aaPredicted RBP14.51□□□□□ -0.09
SHOX2-205ENST00000490689 MAGEB6Q8N7X4 407 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 APPBP2Q92624 585 aa14.51□□□□□ -0.09
SHOX2-205ENST00000490689 OSBPL5Q9H0X9 879 aaPredicted RBP14.51□□□□□ -0.09
SHOX2-205ENST00000490689 RNF41Q9H4P4 317 aaPredicted RBP14.51□□□□□ -0.09
SHOX2-205ENST00000490689 TMCO5BA8MYB1 307 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 A1BGP04217 495 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 IFFO1Q0D2I5 559 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 TTF1Q15361 905 aaPredicted RBP14.5□□□□□ -0.09
SHOX2-205ENST00000490689 VSTM4Q8IW00 320 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 LRRN4CLQ8ND94 238 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 EHBP1Q8NDI1 1231 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 ACRBPQ8NEB7 543 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 CDC23Q9UJX2 597 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 ARHGEF40Q8TER5 1519 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 CEP152O94986 1710 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 NOP2P46087 812 aaKnown RBP14.5□□□□□ -0.09
SHOX2-205ENST00000490689 ATP2B2Q01814 1243 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 GOPCQ9HD26 462 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 ABCB6Q9NP58 842 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 KDRP35968 1356 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 PRDM1O75626 825 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 MBD4O95243 580 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 USP5P45974 858 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 MICALCLQ6ZW33 695 aa14.5□□□□□ -0.09
SHOX2-205ENST00000490689 GOLGA6BA6NDN3 693 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 INPP5BP32019 993 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 HPDP32754 393 aaPredicted RBP14.49□□□□□ -0.09
SHOX2-205ENST00000490689 CYP2C19P33261 490 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 KRT83P78385 493 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 SOGA3Q5TF21 947 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 PI16Q6UXB8 463 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 VAT1LQ9HCJ6 419 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 POLR3EQ9NVU0 708 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 GLI2P10070 1586 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 CCDC151A5D8V7 595 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 TACC1O75410 805 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 KIF23Q02241 960 aaPredicted RBP14.49□□□□□ -0.09
SHOX2-205ENST00000490689 CYP26C1Q6V0L0 522 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 NYAP1Q6ZVC0 841 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 PUS3Q9BZE2 481 aaKnown RBP14.49□□□□□ -0.09
SHOX2-205ENST00000490689 TNRQ92752 1358 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 PSMA7O14818 248 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 IKBKBO14920 756 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 CCT5P48643 541 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 KRT28Q7Z3Y7 464 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 TMTC1Q8IUR5 882 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms