RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 COL6A1P12109 1028 aa17.41■□□□□ 0.38
EXOSC3-207ENST00000490516 CCDC57Q2TAC2 916 aa17.41■□□□□ 0.38
EXOSC3-207ENST00000490516 EPHA10Q5JZY3 1008 aa17.41■□□□□ 0.38
EXOSC3-207ENST00000490516 TBC1D22AQ8WUA7 517 aa17.41■□□□□ 0.38
EXOSC3-207ENST00000490516 MRIQ9BWK5 157 aa17.41■□□□□ 0.38
EXOSC3-207ENST00000490516 AFG3L2Q9Y4W6 797 aa17.41■□□□□ 0.38
EXOSC3-207ENST00000490516 LTBP2Q14767 1821 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 DOCK1Q14185 1865 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 FRAT2O75474 233 aaPredicted RBP17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 PTPRAP18433 802 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 FBXO33Q7Z6M2 555 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 VPS37DQ86XT2 251 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 LINS1Q8NG48 757 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 TRIB2Q92519 343 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 GJD2Q9UKL4 321 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 ADAMTS8Q9UP79 889 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 FRMPD3Q5JV73 1810 aa17.4■□□□□ 0.38
EXOSC3-207ENST00000490516 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.37
EXOSC3-207ENST00000490516 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
EXOSC3-207ENST00000490516 NFIAQ12857 509 aa17.39■□□□□ 0.37
EXOSC3-207ENST00000490516 HHIPL2Q6UWX4 724 aa17.39■□□□□ 0.37
EXOSC3-207ENST00000490516 SCYL3Q8IZE3 742 aa17.39■□□□□ 0.37
EXOSC3-207ENST00000490516 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
EXOSC3-207ENST00000490516 FAM122AQ96E09 287 aa17.39■□□□□ 0.37
EXOSC3-207ENST00000490516 LBHD1Q9BQE6 289 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-207ENST00000490516 PHF20L1A8MW92 1017 aa17.38■□□□□ 0.37
EXOSC3-207ENST00000490516 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
EXOSC3-207ENST00000490516 FAM110CQ1W6H9 321 aa17.38■□□□□ 0.37
EXOSC3-207ENST00000490516 TTYH1Q9H313 450 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-207ENST00000490516 PICK1Q9NRD5 415 aa17.38■□□□□ 0.37
EXOSC3-207ENST00000490516 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-207ENST00000490516 MAST3O60307 1309 aa17.38■□□□□ 0.37
EXOSC3-207ENST00000490516 TRIM75PA6NK02 468 aa17.37■□□□□ 0.37
EXOSC3-207ENST00000490516 PRKAR2AP13861 404 aaKnown RBP17.37■□□□□ 0.37
EXOSC3-207ENST00000490516 FOSL2P15408 326 aa17.37■□□□□ 0.37
EXOSC3-207ENST00000490516 TJAP1Q5JTD0 557 aa17.37■□□□□ 0.37
EXOSC3-207ENST00000490516 TREML2Q5T2D2 321 aa17.37■□□□□ 0.37
EXOSC3-207ENST00000490516 CDC42EP5Q6NZY7 148 aa17.37■□□□□ 0.37
EXOSC3-207ENST00000490516 ZFPM1Q8IX07 1006 aa17.37■□□□□ 0.37
EXOSC3-207ENST00000490516 FAM198AQ9UFP1 575 aa17.37■□□□□ 0.37
EXOSC3-207ENST00000490516 AGTPBP1Q9UPW5 1226 aa17.37■□□□□ 0.37
EXOSC3-207ENST00000490516 TMEM265A0A087WTH1 108 aa17.36■□□□□ 0.37
EXOSC3-207ENST00000490516 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
EXOSC3-207ENST00000490516 FLIIQ13045 1269 aa17.36■□□□□ 0.37
EXOSC3-207ENST00000490516 FKBP5Q13451 457 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-207ENST00000490516 MAP3K21Q5TCX8 1036 aa17.36■□□□□ 0.37
EXOSC3-207ENST00000490516 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
EXOSC3-207ENST00000490516 ATRNL1Q5VV63 1379 aa17.36■□□□□ 0.37
EXOSC3-207ENST00000490516 SLURP2P0DP57 97 aa17.35■□□□□ 0.37
EXOSC3-207ENST00000490516 CYP2B6P20813 491 aa17.35■□□□□ 0.37
EXOSC3-207ENST00000490516 SHHQ15465 462 aa17.35■□□□□ 0.37
EXOSC3-207ENST00000490516 TSR2Q969E8 191 aaKnown RBP17.35■□□□□ 0.37
EXOSC3-207ENST00000490516 DAGLAQ9Y4D2 1042 aa17.35■□□□□ 0.37
EXOSC3-207ENST00000490516 LOC285556D6RIA3 1793 aa17.35■□□□□ 0.37
EXOSC3-207ENST00000490516 APAF1O14727 1248 aa17.34■□□□□ 0.37
EXOSC3-207ENST00000490516 RALBP1Q15311 655 aa17.34■□□□□ 0.37
EXOSC3-207ENST00000490516 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
EXOSC3-207ENST00000490516 C9orf50Q5SZB4 431 aa17.34■□□□□ 0.37
EXOSC3-207ENST00000490516 LHX8Q68G74 356 aa17.34■□□□□ 0.37
EXOSC3-207ENST00000490516 USP38Q8NB14 1042 aa17.34■□□□□ 0.37
EXOSC3-207ENST00000490516 SUGT1Q9Y2Z0 365 aa17.34■□□□□ 0.37
EXOSC3-207ENST00000490516 CACNA1FO60840 1977 aa17.33■□□□□ 0.37
EXOSC3-207ENST00000490516 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
EXOSC3-207ENST00000490516 CACNB2Q08289 660 aaPredicted RBP17.33■□□□□ 0.36
EXOSC3-207ENST00000490516 DIXDC1Q155Q3 683 aa17.33■□□□□ 0.36
EXOSC3-207ENST00000490516 PNMA3Q9UL41 463 aa17.33■□□□□ 0.36
EXOSC3-207ENST00000490516 CCND3P30281 292 aaPredicted RBP17.32■□□□□ 0.36
EXOSC3-207ENST00000490516 SENP6Q9GZR1 1112 aaPredicted RBP17.32■□□□□ 0.36
EXOSC3-207ENST00000490516 USP40Q9NVE5 1235 aa17.32■□□□□ 0.36
EXOSC3-207ENST00000490516 MROH5Q6ZUA9 1318 aa17.31■□□□□ 0.36
EXOSC3-207ENST00000490516 GCLCP48506 637 aaPredicted RBP17.31■□□□□ 0.36
EXOSC3-207ENST00000490516 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
EXOSC3-207ENST00000490516 LRRFIP2Q9Y608 721 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-207ENST00000490516 F6X3S4 739 aa17.3■□□□□ 0.36
EXOSC3-207ENST00000490516 ATN1P54259 1190 aaPredicted RBP17.3■□□□□ 0.36
EXOSC3-207ENST00000490516 SMAD3P84022 425 aaKnown RBP17.3■□□□□ 0.36
EXOSC3-207ENST00000490516 MAP3K12Q12852 859 aa17.3■□□□□ 0.36
EXOSC3-207ENST00000490516 BEND3Q5T5X7 828 aa17.3■□□□□ 0.36
EXOSC3-207ENST00000490516 SH3BP5LQ7L8J4 393 aa17.3■□□□□ 0.36
EXOSC3-207ENST00000490516 ATAD5Q96QE3 1844 aa17.3■□□□□ 0.36
EXOSC3-207ENST00000490516 MYH2Q9UKX2 1941 aa17.29■□□□□ 0.36
EXOSC3-207ENST00000490516 PEX10O60683 326 aa17.29■□□□□ 0.36
EXOSC3-207ENST00000490516 CTNND1O60716 968 aaKnown RBP17.29■□□□□ 0.36
EXOSC3-207ENST00000490516 LRRC24Q50LG9 513 aa17.29■□□□□ 0.36
EXOSC3-207ENST00000490516 PRKAG2Q9UGJ0 569 aa17.29■□□□□ 0.36
EXOSC3-207ENST00000490516 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
EXOSC3-207ENST00000490516 RLFQ13129 1914 aa17.28■□□□□ 0.36
EXOSC3-207ENST00000490516 GRM8O00222 908 aa17.28■□□□□ 0.36
EXOSC3-207ENST00000490516 ZKSCAN1P17029 563 aaPredicted RBP17.28■□□□□ 0.36
EXOSC3-207ENST00000490516 RGS3P49796 1198 aa17.28■□□□□ 0.36
EXOSC3-207ENST00000490516 CCL14Q16627 93 aa17.28■□□□□ 0.36
EXOSC3-207ENST00000490516 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
EXOSC3-207ENST00000490516 NUDT12Q9BQG2 462 aa17.28■□□□□ 0.36
EXOSC3-207ENST00000490516 ASCC2Q9H1I8 757 aaPredicted RBP17.28■□□□□ 0.36
EXOSC3-207ENST00000490516 XRCC5P13010 732 aaKnown RBP17.27■□□□□ 0.36
EXOSC3-207ENST00000490516 MAP3K10Q02779 954 aa17.27■□□□□ 0.36
EXOSC3-207ENST00000490516 METTL24Q5JXM2 366 aa17.27■□□□□ 0.36
EXOSC3-207ENST00000490516 ZSCAN29Q8IWY8 852 aaPredicted RBP17.27■□□□□ 0.36
EXOSC3-207ENST00000490516 VGLL2Q8N8G2 317 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms