RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 GPR75-ASB3A0A0A6YYF3 556 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 DDTLA6NHG4 134 aaPredicted RBP19.36■□□□□ 0.69
NUP58-213ENST00000490231 PTPRAP18433 802 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 PSMC4P43686 418 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 MECOMQ03112 1051 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 SLC4A8Q2Y0W8 1093 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 GPAT2Q6NUI2 795 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 ZSCAN29Q8IWY8 852 aaPredicted RBP19.36■□□□□ 0.69
NUP58-213ENST00000490231 SH3TC2Q8TF17 1288 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 NEUROD6Q96NK8 337 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 PARK7Q99497 189 aaKnown RBP19.36■□□□□ 0.69
NUP58-213ENST00000490231 DDX4Q9NQI0 724 aaKnown RBP19.36■□□□□ 0.69
NUP58-213ENST00000490231 HMG20BQ9P0W2 317 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 SRRDQ9UH36 339 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.36■□□□□ 0.69
NUP58-213ENST00000490231 ZHX2Q9Y6X8 837 aa19.36■□□□□ 0.69
NUP58-213ENST00000490231 A0A0G2JLL6 359 aaPredicted RBP19.35■□□□□ 0.69
NUP58-213ENST00000490231 CTNND1O60716 968 aaKnown RBP19.35■□□□□ 0.69
NUP58-213ENST00000490231 NPM3O75607 178 aaKnown RBP19.35■□□□□ 0.69
NUP58-213ENST00000490231 MAP4K4O95819 1239 aaPredicted RBP19.35■□□□□ 0.69
NUP58-213ENST00000490231 HOXD10P28358 340 aa19.35■□□□□ 0.69
NUP58-213ENST00000490231 CTGFP29279 349 aa19.35■□□□□ 0.69
NUP58-213ENST00000490231 RHBDL3P58872 404 aa19.35■□□□□ 0.69
NUP58-213ENST00000490231 FASTKD5Q7L8L6 764 aaKnown RBP19.35■□□□□ 0.69
NUP58-213ENST00000490231 PRRT2Q7Z6L0 340 aaPredicted RBP19.35■□□□□ 0.69
NUP58-213ENST00000490231 SPATA5Q8NB90 893 aa19.35■□□□□ 0.69
NUP58-213ENST00000490231 TRIM47Q96LD4 638 aa19.35■□□□□ 0.69
NUP58-213ENST00000490231 AFG3L2Q9Y4W6 797 aa19.35■□□□□ 0.69
NUP58-213ENST00000490231 BCAR3O75815 825 aa19.34■□□□□ 0.69
NUP58-213ENST00000490231 ARID4AP29374 1257 aaPredicted RBP19.34■□□□□ 0.69
NUP58-213ENST00000490231 GSTO1P78417 241 aa19.34■□□□□ 0.69
NUP58-213ENST00000490231 PICALMQ13492 652 aa19.34■□□□□ 0.69
NUP58-213ENST00000490231 GORABQ5T7V8 394 aa19.34■□□□□ 0.69
NUP58-213ENST00000490231 ZNF384Q8TF68 577 aa19.34■□□□□ 0.69
NUP58-213ENST00000490231 FRAT1Q92837 279 aaPredicted RBP19.34■□□□□ 0.69
NUP58-213ENST00000490231 DOCK2Q92608 1830 aa19.34■□□□□ 0.69
NUP58-213ENST00000490231 MYH2Q9UKX2 1941 aa19.33■□□□□ 0.69
NUP58-213ENST00000490231 ZSWIM8A7E2V4 1837 aa19.33■□□□□ 0.69
NUP58-213ENST00000490231 PNMA6EA0A0J9YXQ4 647 aa19.33■□□□□ 0.68
NUP58-213ENST00000490231 TBC1D12O60347 775 aa19.33■□□□□ 0.68
NUP58-213ENST00000490231 FMNL1O95466 1100 aaPredicted RBP19.33■□□□□ 0.68
NUP58-213ENST00000490231 LDHCP07864 332 aa19.33■□□□□ 0.68
NUP58-213ENST00000490231 BCRP11274 1271 aa19.33■□□□□ 0.68
NUP58-213ENST00000490231 OSBPP22059 807 aa19.33■□□□□ 0.68
NUP58-213ENST00000490231 G3BP1Q13283 466 aaKnown RBP eCLIP19.33■□□□□ 0.68
NUP58-213ENST00000490231 NSUN4Q96CB9 384 aaKnown RBP19.33■□□□□ 0.68
NUP58-213ENST00000490231 TNNQ9UQP3 1299 aa19.33■□□□□ 0.68
NUP58-213ENST00000490231 SLC45A1Q9Y2W3 748 aa19.33■□□□□ 0.68
NUP58-213ENST00000490231 BRCA2P51587 3418 aa19.33■□□□□ 0.68
NUP58-213ENST00000490231 CYP2C8P10632 490 aa19.32■□□□□ 0.68
NUP58-213ENST00000490231 PI16Q6UXB8 463 aa19.32■□□□□ 0.68
NUP58-213ENST00000490231 MYPNQ86TC9 1320 aa19.31■□□□□ 0.68
NUP58-213ENST00000490231 COL2A1P02458 1487 aaPredicted RBP19.31■□□□□ 0.68
NUP58-213ENST00000490231 ECM2O94769 699 aaPredicted RBP19.31■□□□□ 0.68
NUP58-213ENST00000490231 MYCP01106 439 aaPredicted RBP19.31■□□□□ 0.68
NUP58-213ENST00000490231 UQCRFS1P1P0C7P4 283 aa19.31■□□□□ 0.68
NUP58-213ENST00000490231 RAET1EQ8TD07 263 aa19.31■□□□□ 0.68
NUP58-213ENST00000490231 CLUAP1Q96AJ1 413 aa19.31■□□□□ 0.68
NUP58-213ENST00000490231 MKI67P46013 3256 aaKnown RBP19.31■□□□□ 0.68
NUP58-213ENST00000490231 AK9Q5TCS8 1911 aa19.31■□□□□ 0.68
NUP58-213ENST00000490231 SLURP2P0DP57 97 aa19.3■□□□□ 0.68
NUP58-213ENST00000490231 GRK4P32298 578 aa19.3■□□□□ 0.68
NUP58-213ENST00000490231 MCAMP43121 646 aa19.3■□□□□ 0.68
NUP58-213ENST00000490231 FCGRTP55899 365 aa19.3■□□□□ 0.68
NUP58-213ENST00000490231 TBC1D9Q6ZT07 1266 aa19.3■□□□□ 0.68
NUP58-213ENST00000490231 GPR108Q9NPR9 543 aa19.3■□□□□ 0.68
NUP58-213ENST00000490231 RAI14Q9P0K7 980 aa19.3■□□□□ 0.68
NUP58-213ENST00000490231 POLA2Q14181 598 aa19.29■□□□□ 0.68
NUP58-213ENST00000490231 HABP4Q5JVS0 413 aaKnown RBP19.29■□□□□ 0.68
NUP58-213ENST00000490231 ZKSCAN2Q63HK3 967 aa19.29■□□□□ 0.68
NUP58-213ENST00000490231 GADL1Q6ZQY3 521 aa19.29■□□□□ 0.68
NUP58-213ENST00000490231 TMEM57Q8N5G2 664 aa19.29■□□□□ 0.68
NUP58-213ENST00000490231 OSBPL5Q9H0X9 879 aaPredicted RBP19.29■□□□□ 0.68
NUP58-213ENST00000490231 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.29■□□□□ 0.68
NUP58-213ENST00000490231 TRIM75PA6NK02 468 aa19.28■□□□□ 0.68
NUP58-213ENST00000490231 PRKCZQ05513 592 aa19.28■□□□□ 0.68
NUP58-213ENST00000490231 MTFR1Q15390 333 aa19.28■□□□□ 0.68
NUP58-213ENST00000490231 LRP2BPQ9P2M1 347 aa19.28■□□□□ 0.68
NUP58-213ENST00000490231 NKX2-3Q8TAU0 364 aa19.27■□□□□ 0.68
NUP58-213ENST00000490231 SSH3Q8TE77 659 aa19.27■□□□□ 0.68
NUP58-213ENST00000490231 TBC1D2Q9BYX2 928 aa19.27■□□□□ 0.68
NUP58-213ENST00000490231 AGTPBP1Q9UPW5 1226 aa19.27■□□□□ 0.68
NUP58-213ENST00000490231 KIAA0100Q14667 2235 aaKnown RBP19.27■□□□□ 0.67
NUP58-213ENST00000490231 DOCK1Q14185 1865 aa19.26■□□□□ 0.67
NUP58-213ENST00000490231 IGSF3O75054 1194 aa19.26■□□□□ 0.67
NUP58-213ENST00000490231 ATP8B2P98198 1209 aa19.26■□□□□ 0.67
NUP58-213ENST00000490231 TNNI3KQ59H18 835 aa19.26■□□□□ 0.67
NUP58-213ENST00000490231 TEX11Q8IYF3 940 aa19.26■□□□□ 0.67
NUP58-213ENST00000490231 SLAIN1Q8ND83 568 aa19.26■□□□□ 0.67
NUP58-213ENST00000490231 SMCR8Q8TEV9 937 aaPredicted RBP19.26■□□□□ 0.67
NUP58-213ENST00000490231 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.26■□□□□ 0.67
NUP58-213ENST00000490231 FPGT-TNNI3KV9GXZ4 949 aa19.26■□□□□ 0.67
NUP58-213ENST00000490231 FAM196BA6NMK8 535 aa19.25■□□□□ 0.67
NUP58-213ENST00000490231 GJB1P08034 283 aa19.25■□□□□ 0.67
NUP58-213ENST00000490231 UBXN2AP68543 259 aa19.25■□□□□ 0.67
NUP58-213ENST00000490231 CCDC158Q5M9N0 1113 aa19.25■□□□□ 0.67
NUP58-213ENST00000490231 TTC39AQ5SRH9 613 aa19.25■□□□□ 0.67
NUP58-213ENST00000490231 CCDC84Q86UT8 332 aaPredicted RBP19.25■□□□□ 0.67
NUP58-213ENST00000490231 PROCA1Q8NCQ7 364 aaPredicted RBP19.25■□□□□ 0.67
NUP58-213ENST00000490231 SHISA4Q96DD7 197 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms