RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 TRIOBPQ9H2D6 2365 aa14.59□□□□□ -0.07
FDPS-215ENST00000490140 A0A0G2JLL6 359 aaPredicted RBP14.58□□□□□ -0.08
FDPS-215ENST00000490140 CTNND1O60716 968 aaKnown RBP14.58□□□□□ -0.08
FDPS-215ENST00000490140 GNAI3P08754 354 aa14.58□□□□□ -0.08
FDPS-215ENST00000490140 PHKA1P46020 1223 aa14.58□□□□□ -0.08
FDPS-215ENST00000490140 CCDC102BQ68D86 513 aa14.58□□□□□ -0.08
FDPS-215ENST00000490140 PRRT2Q7Z6L0 340 aaPredicted RBP14.58□□□□□ -0.08
FDPS-215ENST00000490140 ABCF2Q9UG63 623 aa14.58□□□□□ -0.08
FDPS-215ENST00000490140 PNMA3Q9UL41 463 aa14.58□□□□□ -0.08
FDPS-215ENST00000490140 ZHX2Q9Y6X8 837 aa14.58□□□□□ -0.08
FDPS-215ENST00000490140 GJB1P08034 283 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 BCRP11274 1271 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 PTPRAP18433 802 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 GJA8P48165 433 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 GSTO1P78417 241 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 RASGRF1Q13972 1273 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 GADL1Q6ZQY3 521 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 FAM163AQ96GL9 167 aaPredicted RBP14.57□□□□□ -0.08
FDPS-215ENST00000490140 TBC1D2Q9BYX2 928 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 RNF208Q9H0X6 261 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 NR2E3Q9Y5X4 410 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 RFX7Q2KHR2 1363 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 ATRNL1Q5VV63 1379 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 MGAMO43451 1857 aa14.57□□□□□ -0.08
FDPS-215ENST00000490140 LDHCP07864 332 aa14.56□□□□□ -0.08
FDPS-215ENST00000490140 CCL5P13501 91 aa14.56□□□□□ -0.08
FDPS-215ENST00000490140 BTDP43251 543 aa14.56□□□□□ -0.08
FDPS-215ENST00000490140 FXR1P51114 621 aaKnown RBP eCLIP14.56□□□□□ -0.082e-8■■□□□ 13.1
FDPS-215ENST00000490140 PABPC4Q13310 644 aaKnown RBP eCLIP14.56□□□□□ -0.081e-323■■■□□ 17.4
FDPS-215ENST00000490140 MOGSQ13724 837 aa14.56□□□□□ -0.08
FDPS-215ENST00000490140 GORABQ5T7V8 394 aa14.56□□□□□ -0.08
FDPS-215ENST00000490140 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
FDPS-215ENST00000490140 DPF3Q92784 378 aa14.56□□□□□ -0.08
FDPS-215ENST00000490140 NOB1Q9ULX3 412 aaKnown RBP14.56□□□□□ -0.08
FDPS-215ENST00000490140 COLQQ9Y215 455 aaPredicted RBP14.56□□□□□ -0.08
FDPS-215ENST00000490140 MROH7-TTC4A0A0A0MT08 1334 aa14.56□□□□□ -0.08
FDPS-215ENST00000490140 COL2A1P02458 1487 aaPredicted RBP14.56□□□□□ -0.08
FDPS-215ENST00000490140 H0YGN5 161 aa14.55□□□□□ -0.08
FDPS-215ENST00000490140 TNPO2O14787 897 aaKnown RBP14.55□□□□□ -0.08
FDPS-215ENST00000490140 SRGAP3O43295 1099 aa14.55□□□□□ -0.08
FDPS-215ENST00000490140 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
FDPS-215ENST00000490140 ECM2O94769 699 aaPredicted RBP14.55□□□□□ -0.08
FDPS-215ENST00000490140 CYP2C8P10632 490 aa14.55□□□□□ -0.08
FDPS-215ENST00000490140 PRKCZQ05513 592 aa14.55□□□□□ -0.08
FDPS-215ENST00000490140 PICALMQ13492 652 aa14.55□□□□□ -0.08
FDPS-215ENST00000490140 MTFR1Q15390 333 aa14.55□□□□□ -0.08
FDPS-215ENST00000490140 ARHGAP45Q92619 1136 aa14.55□□□□□ -0.08
FDPS-215ENST00000490140 COA7Q96BR5 231 aa14.55□□□□□ -0.08
FDPS-215ENST00000490140 NOL10Q9BSC4 688 aaKnown RBP14.55□□□□□ -0.08
FDPS-215ENST00000490140 AFG3L2Q9Y4W6 797 aa14.55□□□□□ -0.08
FDPS-215ENST00000490140 PTPRFP10586 1907 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 A0A1B0GUL7 405 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 PHF20L1A8MW92 1017 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 ADCY3O60266 1144 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 ADORA1P30542 326 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 MAP3K10Q02779 954 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 GPAT2Q6NUI2 795 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 PXYLP1Q8TE99 480 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 SHISA4Q96DD7 197 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 AGTPBP1Q9UPW5 1226 aa14.54□□□□□ -0.08
FDPS-215ENST00000490140 PA2G4Q9UQ80 394 aaKnown RBP14.54□□□□□ -0.08
FDPS-215ENST00000490140 TRIM75PA6NK02 468 aa14.53□□□□□ -0.08
FDPS-215ENST00000490140 IPO8O15397 1037 aaKnown RBP14.53□□□□□ -0.08
FDPS-215ENST00000490140 TBC1D12O60347 775 aa14.53□□□□□ -0.08
FDPS-215ENST00000490140 FARP2O94887 1054 aaPredicted RBP14.53□□□□□ -0.08
FDPS-215ENST00000490140 CTGFP29279 349 aa14.53□□□□□ -0.08
FDPS-215ENST00000490140 MECOMQ03112 1051 aa14.53□□□□□ -0.08
FDPS-215ENST00000490140 MTX1Q13505 466 aa14.53□□□□□ -0.08
FDPS-215ENST00000490140 IRF5Q13568 498 aa14.53□□□□□ -0.08
FDPS-215ENST00000490140 PROCA1Q8NCQ7 364 aaPredicted RBP14.53□□□□□ -0.08
FDPS-215ENST00000490140 U2AF1L4Q8WU68 220 aaKnown RBP14.53□□□□□ -0.08
FDPS-215ENST00000490140 XAGE2Q96GT9 111 aa14.53□□□□□ -0.08
FDPS-215ENST00000490140 MEIS3Q99687 375 aa14.53□□□□□ -0.08
FDPS-215ENST00000490140 OSBPL5Q9H0X9 879 aaPredicted RBP14.53□□□□□ -0.08
FDPS-215ENST00000490140 GPR75-ASB3A0A0A6YYF3 556 aa14.52□□□□□ -0.09
FDPS-215ENST00000490140 GCLCP48506 637 aaPredicted RBP14.52□□□□□ -0.09
FDPS-215ENST00000490140 FLT3LGP49771 235 aa14.52□□□□□ -0.09
FDPS-215ENST00000490140 FAM110CQ1W6H9 321 aa14.52□□□□□ -0.09
FDPS-215ENST00000490140 ZFPM1Q8IX07 1006 aa14.52□□□□□ -0.09
FDPS-215ENST00000490140 TRMT2AQ8IZ69 625 aaKnown RBP14.52□□□□□ -0.09
FDPS-215ENST00000490140 CDCA7LQ96GN5 454 aa14.52□□□□□ -0.09
FDPS-215ENST00000490140 NEUROD6Q96NK8 337 aa14.52□□□□□ -0.09
FDPS-215ENST00000490140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.52□□□□□ -0.09
FDPS-215ENST00000490140 AS3MTQ9HBK9 375 aa14.52□□□□□ -0.09
FDPS-215ENST00000490140 RANBP2P49792 3224 aaKnown RBP14.52□□□□□ -0.09
FDPS-215ENST00000490140 DDTLA6NHG4 134 aaPredicted RBP14.51□□□□□ -0.09
FDPS-215ENST00000490140 PLCG2P16885 1265 aa14.51□□□□□ -0.09
FDPS-215ENST00000490140 TIMM10P62072 90 aa14.51□□□□□ -0.09
FDPS-215ENST00000490140 TFCP2Q12800 502 aa14.51□□□□□ -0.09
FDPS-215ENST00000490140 CHRDL2Q6WN34 429 aa14.51□□□□□ -0.09
FDPS-215ENST00000490140 SPATA5Q8NB90 893 aa14.51□□□□□ -0.09
FDPS-215ENST00000490140 RAI14Q9P0K7 980 aa14.51□□□□□ -0.09
FDPS-215ENST00000490140 HERC5Q9UII4 1024 aaKnown RBP14.51□□□□□ -0.09
FDPS-215ENST00000490140 PHIPQ8WWQ0 1821 aa14.5□□□□□ -0.09
FDPS-215ENST00000490140 IGSF3O75054 1194 aa14.5□□□□□ -0.09
FDPS-215ENST00000490140 SGPL1O95470 568 aa14.5□□□□□ -0.09
FDPS-215ENST00000490140 BAG3O95817 575 aa14.5□□□□□ -0.09
FDPS-215ENST00000490140 GNAI2P04899 355 aa14.5□□□□□ -0.09
FDPS-215ENST00000490140 INHAP05111 366 aa14.5□□□□□ -0.09
FDPS-215ENST00000490140 UQCRFS1P1P0C7P4 283 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms