RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 ZHX2Q9Y6X8 837 aa16.14■□□□□ 0.17
LTA-216ENST00000489638 ENTPD3O75355 529 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 IL15P40933 162 aaPredicted RBP16.13■□□□□ 0.17
LTA-216ENST00000489638 RNF208Q9H0X6 261 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 PICK1Q9NRD5 415 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 GABRQQ9UN88 632 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 PA2G4Q9UQ80 394 aaKnown RBP16.13■□□□□ 0.17
LTA-216ENST00000489638 MGAMO43451 1857 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 SLURP2P0DP57 97 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 MAP3K10Q02779 954 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 RASGRF1Q13972 1273 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 CCDC102BQ68D86 513 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 FASTKD5Q7L8L6 764 aaKnown RBP16.13■□□□□ 0.17
LTA-216ENST00000489638 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 DPF3Q92784 378 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 AFG3L2Q9Y4W6 797 aa16.13■□□□□ 0.17
LTA-216ENST00000489638 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
LTA-216ENST00000489638 DOCK1Q14185 1865 aa16.12■□□□□ 0.17
LTA-216ENST00000489638 MYH2Q9UKX2 1941 aa16.12■□□□□ 0.17
LTA-216ENST00000489638 DDTLA6NHG4 134 aaPredicted RBP16.12■□□□□ 0.17
LTA-216ENST00000489638 UBXN2AP68543 259 aa16.12■□□□□ 0.17
LTA-216ENST00000489638 ZGPATQ8N5A5 531 aaKnown RBP16.12■□□□□ 0.17
LTA-216ENST00000489638 U2AF1L4Q8WU68 220 aaKnown RBP16.12■□□□□ 0.17
LTA-216ENST00000489638 UNC93B1Q9H1C4 597 aa16.12■□□□□ 0.17
LTA-216ENST00000489638 COPRSQ9NQ92 184 aa16.12■□□□□ 0.17
LTA-216ENST00000489638 DDX4Q9NQI0 724 aaKnown RBP16.12■□□□□ 0.17
LTA-216ENST00000489638 RBM27Q9P2N5 1060 aaKnown RBP16.12■□□□□ 0.17
LTA-216ENST00000489638 BIN2Q9UBW5 565 aaPredicted RBP16.12■□□□□ 0.17
LTA-216ENST00000489638 SLC45A1Q9Y2W3 748 aa16.12■□□□□ 0.17
LTA-216ENST00000489638 PTPRFP10586 1907 aa16.12■□□□□ 0.17
LTA-216ENST00000489638 PDS5AQ29RF7 1337 aaKnown RBP16.11■□□□□ 0.17
LTA-216ENST00000489638 GADL1Q6ZQY3 521 aa16.11■□□□□ 0.17
LTA-216ENST00000489638 DZIP1Q86YF9 867 aaKnown RBP16.11■□□□□ 0.17
LTA-216ENST00000489638 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
LTA-216ENST00000489638 HTATIP2Q9BUP3 242 aa16.11■□□□□ 0.17
LTA-216ENST00000489638 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.11■□□□□ 0.17
LTA-216ENST00000489638 PHIPQ8WWQ0 1821 aa16.1■□□□□ 0.17
LTA-216ENST00000489638 ADCY3O60266 1144 aa16.1■□□□□ 0.17
LTA-216ENST00000489638 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
LTA-216ENST00000489638 FARP2O94887 1054 aaPredicted RBP16.1■□□□□ 0.17
LTA-216ENST00000489638 BTDP43251 543 aa16.1■□□□□ 0.17
LTA-216ENST00000489638 FLT3LGP49771 235 aa16.1■□□□□ 0.17
LTA-216ENST00000489638 ZSCAN29Q8IWY8 852 aaPredicted RBP16.1■□□□□ 0.17
LTA-216ENST00000489638 FAM163AQ96GL9 167 aaPredicted RBP16.1■□□□□ 0.17
LTA-216ENST00000489638 PRO3102Q9H379 93 aa16.1■□□□□ 0.17
LTA-216ENST00000489638 ABCF2Q9UG63 623 aa16.1■□□□□ 0.17
LTA-216ENST00000489638 TRIM75PA6NK02 468 aa16.09■□□□□ 0.17
LTA-216ENST00000489638 INHAP05111 366 aa16.09■□□□□ 0.17
LTA-216ENST00000489638 ELNP15502 786 aa16.09■□□□□ 0.17
LTA-216ENST00000489638 PICALMQ13492 652 aa16.09■□□□□ 0.17
LTA-216ENST00000489638 CCDC84Q86UT8 332 aaPredicted RBP16.09■□□□□ 0.17
LTA-216ENST00000489638 MEIS3Q99687 375 aa16.09■□□□□ 0.17
LTA-216ENST00000489638 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
LTA-216ENST00000489638 MROH7-TTC4A0A0A0MT08 1334 aa16.09■□□□□ 0.17
LTA-216ENST00000489638 RANBP2P49792 3224 aaKnown RBP16.08■□□□□ 0.17
LTA-216ENST00000489638 TNPO2O14787 897 aaKnown RBP16.08■□□□□ 0.16
LTA-216ENST00000489638 SGPL1O95470 568 aa16.08■□□□□ 0.16
LTA-216ENST00000489638 RHBDL3P58872 404 aa16.08■□□□□ 0.16
LTA-216ENST00000489638 TIMM10P62072 90 aa16.08■□□□□ 0.16
LTA-216ENST00000489638 IRF5Q13568 498 aa16.08■□□□□ 0.16
LTA-216ENST00000489638 SLF2Q8IX21 1173 aa16.08■□□□□ 0.16
LTA-216ENST00000489638 TRMT2AQ8IZ69 625 aaKnown RBP16.08■□□□□ 0.16
LTA-216ENST00000489638 PXYLP1Q8TE99 480 aa16.08■□□□□ 0.16
LTA-216ENST00000489638 SMCR8Q8TEV9 937 aaPredicted RBP16.08■□□□□ 0.16
LTA-216ENST00000489638 ZNF384Q8TF68 577 aa16.08■□□□□ 0.16
LTA-216ENST00000489638 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
LTA-216ENST00000489638 AGTPBP1Q9UPW5 1226 aa16.08■□□□□ 0.16
LTA-216ENST00000489638 SZT2Q5T011 3432 aa16.07■□□□□ 0.16
LTA-216ENST00000489638 GPR75-ASB3A0A0A6YYF3 556 aa16.07■□□□□ 0.16
LTA-216ENST00000489638 ZBTB7BO15156 539 aaPredicted RBP16.07■□□□□ 0.16
LTA-216ENST00000489638 MECOMQ03112 1051 aa16.07■□□□□ 0.16
LTA-216ENST00000489638 HDAC5Q9UQL6 1122 aa16.07■□□□□ 0.16
LTA-216ENST00000489638 A0A1B0GUL7 405 aa16.06■□□□□ 0.16
LTA-216ENST00000489638 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
LTA-216ENST00000489638 TREML2Q5T2D2 321 aa16.06■□□□□ 0.16
LTA-216ENST00000489638 SPTY2D1Q68D10 685 aaPredicted RBP16.06■□□□□ 0.16
LTA-216ENST00000489638 ANKRD13CQ8N6S4 541 aa16.06■□□□□ 0.16
LTA-216ENST00000489638 XAGE2Q96GT9 111 aa16.06■□□□□ 0.16
LTA-216ENST00000489638 PAK6Q9NQU5 681 aaPredicted RBP16.06■□□□□ 0.16
LTA-216ENST00000489638 NR2E3Q9Y5X4 410 aa16.06■□□□□ 0.16
LTA-216ENST00000489638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.06■□□□□ 0.16
LTA-216ENST00000489638 LOC285556D6RIA3 1793 aa16.06■□□□□ 0.16
LTA-216ENST00000489638 COL2A1P02458 1487 aaPredicted RBP16.05■□□□□ 0.16
LTA-216ENST00000489638 FAM196BA6NMK8 535 aa16.05■□□□□ 0.16
LTA-216ENST00000489638 TBC1D12O60347 775 aa16.05■□□□□ 0.16
LTA-216ENST00000489638 CT47B1P0C2W7 299 aaPredicted RBP16.05■□□□□ 0.16
LTA-216ENST00000489638 TFCP2Q12800 502 aa16.05■□□□□ 0.16
LTA-216ENST00000489638 MVPQ14764 893 aaKnown RBP16.05■□□□□ 0.16
LTA-216ENST00000489638 DEFB118Q96PH6 123 aa16.05■□□□□ 0.16
LTA-216ENST00000489638 SRGAP3O43295 1099 aa16.04■□□□□ 0.16
LTA-216ENST00000489638 MTX1Q13505 466 aa16.04■□□□□ 0.16
LTA-216ENST00000489638 FAM110CQ1W6H9 321 aa16.04■□□□□ 0.16
LTA-216ENST00000489638 PI16Q6UXB8 463 aa16.04■□□□□ 0.16
LTA-216ENST00000489638 ERICH6Q7L0X2 663 aa16.04■□□□□ 0.16
LTA-216ENST00000489638 HMG20BQ9P0W2 317 aa16.04■□□□□ 0.16
LTA-216ENST00000489638 PNMA3Q9UL41 463 aa16.04■□□□□ 0.16
LTA-216ENST00000489638 AKAP2Q9Y2D5 859 aa16.04■□□□□ 0.16
LTA-216ENST00000489638 PROCA1Q8NCQ7 364 aaPredicted RBP16.03■□□□□ 0.16
LTA-216ENST00000489638 COA7Q96BR5 231 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms