RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ALG13Q9NP73 1137 aaKnown RBP10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 GGA1Q9UJY5 639 aa10.17□□□□□ -0.78
EXOSC3-206ENST00000489414 WDR87Q6ZQQ6 2873 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 CLRN2A0PK11 232 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 SOWAHBA6NEL2 793 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 SH3RF1Q7Z6J0 888 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 KIAA0825Q8IV33 1275 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 TRPC6Q9Y210 931 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 ATP11BQ9Y2G3 1177 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 KMT2EQ8IZD2 1858 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 ARAP2Q8WZ64 1704 aa10.16□□□□□ -0.78
EXOSC3-206ENST00000489414 GBF1Q92538 1859 aa10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 PRR23AA6NEV1 266 aa10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 BTBD11A6QL63 1104 aa10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 GRXCR1A8MXD5 290 aa10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 SSTR3P32745 418 aaPredicted RBP10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 DLGAP5Q15398 846 aa10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 CCDC129Q6ZRS4 1044 aa10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 CDAN1Q8IWY9 1227 aa10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 TRIB2Q92519 343 aa10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 PCDHAC2Q9Y5I4 1007 aa10.15□□□□□ -0.78
EXOSC3-206ENST00000489414 PLXNB2O15031 1838 aa10.14□□□□□ -0.79
EXOSC3-206ENST00000489414 AOX1Q06278 1338 aa10.14□□□□□ -0.79
EXOSC3-206ENST00000489414 POU3F3P20264 500 aaPredicted RBP10.14□□□□□ -0.79
EXOSC3-206ENST00000489414 IL13P35225 146 aa10.14□□□□□ -0.79
EXOSC3-206ENST00000489414 RMDN1Q96DB5 314 aa10.14□□□□□ -0.79
EXOSC3-206ENST00000489414 TEPSINQ96N21 525 aa10.14□□□□□ -0.79
EXOSC3-206ENST00000489414 VEZTQ9HBM0 779 aa10.14□□□□□ -0.79
EXOSC3-206ENST00000489414 ANKIB1Q9P2G1 1089 aa10.14□□□□□ -0.79
EXOSC3-206ENST00000489414 SPTBN2O15020 2390 aa10.14□□□□□ -0.79
EXOSC3-206ENST00000489414 ZFYVE26Q68DK2 2539 aa10.13□□□□□ -0.79
EXOSC3-206ENST00000489414 GCN1Q92616 2671 aaKnown RBP10.13□□□□□ -0.79
EXOSC3-206ENST00000489414 MYO1BO43795 1136 aa10.13□□□□□ -0.79
EXOSC3-206ENST00000489414 ATOH1Q92858 354 aaPredicted RBP10.13□□□□□ -0.79
EXOSC3-206ENST00000489414 MTCH2Q9Y6C9 303 aa10.13□□□□□ -0.79
EXOSC3-206ENST00000489414 RPAP1Q9BWH6 1393 aaPredicted RBP10.13□□□□□ -0.79
EXOSC3-206ENST00000489414 SLC24A1O60721 1099 aa10.12□□□□□ -0.79
EXOSC3-206ENST00000489414 PPATQ06203 517 aa10.12□□□□□ -0.79
EXOSC3-206ENST00000489414 SNX17Q15036 470 aa10.12□□□□□ -0.79
EXOSC3-206ENST00000489414 RAB30Q15771 203 aa10.12□□□□□ -0.79
EXOSC3-206ENST00000489414 GPAT2Q6NUI2 795 aa10.12□□□□□ -0.79
EXOSC3-206ENST00000489414 FBXW7Q969H0 707 aa10.12□□□□□ -0.79
EXOSC3-206ENST00000489414 IRF2BPLQ9H1B7 796 aa10.12□□□□□ -0.79
EXOSC3-206ENST00000489414 GJD2Q9UKL4 321 aa10.12□□□□□ -0.79
EXOSC3-206ENST00000489414 GAKO14976 1311 aa10.11□□□□□ -0.79
EXOSC3-206ENST00000489414 FPGSQ05932 587 aa10.11□□□□□ -0.79
EXOSC3-206ENST00000489414 SF3B3Q15393 1217 aaKnown RBP10.11□□□□□ -0.79
EXOSC3-206ENST00000489414 TRIM60Q495X7 471 aa10.11□□□□□ -0.79
EXOSC3-206ENST00000489414 RASIP1Q5U651 963 aa10.11□□□□□ -0.79
EXOSC3-206ENST00000489414 NKX2-4Q9H2Z4 354 aa10.11□□□□□ -0.79
EXOSC3-206ENST00000489414 SLC28A3Q9HAS3 691 aa10.11□□□□□ -0.79
EXOSC3-206ENST00000489414 CEP250Q9BV73 2442 aa10.11□□□□□ -0.79
EXOSC3-206ENST00000489414 SH3TC1Q8TE82 1336 aa10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 POTEMA6NI47 508 aa10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 CCND3P30281 292 aaPredicted RBP10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 RPS8P62241 208 aaKnown RBP10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 TNFAIP1Q13829 316 aa10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 BMP8AQ7Z5Y6 402 aa10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 PRMT6Q96LA8 375 aaPredicted RBP10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 MSRAQ9UJ68 235 aa10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 DAGLAQ9Y4D2 1042 aa10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
EXOSC3-206ENST00000489414 GNAT3A8MTJ3 354 aa10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 DNM1LO00429 736 aa10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 CACNB2Q08289 660 aaPredicted RBP10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 PKN1Q16512 942 aa10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 SLC39A5Q6ZMH5 540 aa10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 NLRP10Q86W26 655 aa10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 WRNIP1Q96S55 665 aa10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 SH2B1Q9NRF2 756 aaPredicted RBP10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 YBX2Q9Y2T7 364 aaKnown RBP10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 EP300Q09472 2414 aaPredicted RBP10.09□□□□□ -0.79
EXOSC3-206ENST00000489414 GTPBP6O43824 516 aaPredicted RBP10.08□□□□□ -0.8
EXOSC3-206ENST00000489414 HMOX1P09601 288 aa10.08□□□□□ -0.8
EXOSC3-206ENST00000489414 ZEB1P37275 1124 aaPredicted RBP10.08□□□□□ -0.8
EXOSC3-206ENST00000489414 CFAP100Q494V2 611 aa10.08□□□□□ -0.8
EXOSC3-206ENST00000489414 TTLL5Q6EMB2 1281 aa10.08□□□□□ -0.8
EXOSC3-206ENST00000489414 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
EXOSC3-206ENST00000489414 BSDC1Q9NW68 430 aaPredicted RBP10.08□□□□□ -0.8
EXOSC3-206ENST00000489414 TRMT112Q9UI30 125 aaKnown RBP10.08□□□□□ -0.8
EXOSC3-206ENST00000489414 SPEGQ15772 3267 aa10.08□□□□□ -0.8
EXOSC3-206ENST00000489414 XDHP47989 1333 aa10.07□□□□□ -0.8
EXOSC3-206ENST00000489414 IL9P15248 144 aa10.07□□□□□ -0.8
EXOSC3-206ENST00000489414 FSD1Q9BTV5 496 aa10.07□□□□□ -0.8
EXOSC3-206ENST00000489414 METRNQ9UJH8 293 aa10.07□□□□□ -0.8
EXOSC3-206ENST00000489414 KIAA0355O15063 1070 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 ATP2B4P23634 1241 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 NBL1P41271 181 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 PUM1Q14671 1186 aaKnown RBP eCLIP10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 FAM110CQ1W6H9 321 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 C1orf53Q5VUE5 145 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 KRT40Q6A162 431 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 POTEGQ6S5H5 508 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 ADSSL1Q8N142 457 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 ANKRD13CQ8N6S4 541 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 TMEM39BQ9GZU3 492 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 COA1Q9GZY4 146 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1178.7 ms