RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 RECKO95980 971 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 NXPE4Q6UWF7 544 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 PI16Q6UXB8 463 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 SEZ6L2Q6UXD5 910 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 DTHD1Q6ZMT9 781 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 ZNF765Q7L2R6 523 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 FBXL18Q96ME1 805 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 C12orf49Q9H741 205 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 BSDC1Q9NW68 430 aaPredicted RBP6.91□□□□□ -1.3
XRN1-213ENST00000489241 PPP1R9AQ9ULJ8 1098 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 DAGLAQ9Y4D2 1042 aa6.91□□□□□ -1.3
XRN1-213ENST00000489241 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
XRN1-213ENST00000489241 ZNF157P51786 506 aaPredicted RBP6.9□□□□□ -1.3
XRN1-213ENST00000489241 LCE3BQ5TA77 95 aa6.9□□□□□ -1.3
XRN1-213ENST00000489241 KRTAP1-3Q8IUG1 177 aa6.9□□□□□ -1.3
XRN1-213ENST00000489241 ABI1Q8IZP0 508 aa6.9□□□□□ -1.3
XRN1-213ENST00000489241 CCDC86Q9H6F5 360 aaKnown RBP6.9□□□□□ -1.3
XRN1-213ENST00000489241 GOLGA2P5Q9HBQ8 144 aa6.9□□□□□ -1.3
XRN1-213ENST00000489241 C1GALT1Q9NS00 363 aa6.9□□□□□ -1.3
XRN1-213ENST00000489241 KRT82Q9NSB4 513 aa6.9□□□□□ -1.3
XRN1-213ENST00000489241 FAM8A1Q9UBU6 413 aa6.9□□□□□ -1.3
XRN1-213ENST00000489241 GPN3Q9UHW5 284 aaPredicted RBP6.9□□□□□ -1.3
XRN1-213ENST00000489241 GSTP1P09211 210 aaKnown RBP6.89□□□□□ -1.31
XRN1-213ENST00000489241 LIG1P18858 919 aa6.89□□□□□ -1.31
XRN1-213ENST00000489241 TXKP42681 527 aa6.89□□□□□ -1.31
XRN1-213ENST00000489241 FCGRTP55899 365 aa6.89□□□□□ -1.31
XRN1-213ENST00000489241 PPP2R3AQ06190 1150 aa6.89□□□□□ -1.31
XRN1-213ENST00000489241 NFXL1Q6ZNB6 911 aa6.89□□□□□ -1.31
XRN1-213ENST00000489241 OSBPL7Q9BZF2 842 aa6.89□□□□□ -1.31
XRN1-213ENST00000489241 ATXN3LQ9H3M9 355 aa6.89□□□□□ -1.31
XRN1-213ENST00000489241 CRIM1Q9NZV1 1036 aa6.89□□□□□ -1.31
XRN1-213ENST00000489241 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
XRN1-213ENST00000489241 SLFN14P0C7P3 912 aa6.88□□□□□ -1.31
XRN1-213ENST00000489241 GSTT1P30711 240 aa6.88□□□□□ -1.31
XRN1-213ENST00000489241 ID3Q02535 119 aa6.88□□□□□ -1.31
XRN1-213ENST00000489241 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
XRN1-213ENST00000489241 KIF4BQ2VIQ3 1234 aa6.88□□□□□ -1.31
XRN1-213ENST00000489241 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
XRN1-213ENST00000489241 WDR89Q96FK6 387 aaPredicted RBP6.88□□□□□ -1.31
XRN1-213ENST00000489241 ZC3H12CQ9C0D7 883 aaKnown RBP6.88□□□□□ -1.31
XRN1-213ENST00000489241 PIDD1Q9HB75 910 aa6.88□□□□□ -1.31
XRN1-213ENST00000489241 LRRC4CQ9HCJ2 640 aa6.88□□□□□ -1.31
XRN1-213ENST00000489241 TMEM39AQ9NV64 488 aa6.88□□□□□ -1.31
XRN1-213ENST00000489241 ZNF862O60290 1169 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 TSNAXIP1Q2TAA8 658 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 OGFOD3Q6PK18 319 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 TP53INP2Q8IXH6 220 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 FLCNQ8NFG4 579 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 FAM161BQ96MY7 647 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 FANCD2OSQ96PS1 177 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 RNF19AQ9NV58 838 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 USP35Q9P2H5 1018 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 VTI1BQ9UEU0 232 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 ZC3H7BQ9UGR2 993 aaKnown RBP6.87□□□□□ -1.31
XRN1-213ENST00000489241 RNF114Q9Y508 228 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 PCDHGC5Q9Y5F6 944 aa6.87□□□□□ -1.31
XRN1-213ENST00000489241 LDLRAD1Q5T700 205 aa6.86□□□□□ -1.31
XRN1-213ENST00000489241 PDZD3Q86UT5 571 aa6.86□□□□□ -1.31
XRN1-213ENST00000489241 AGBL5Q8NDL9 886 aa6.86□□□□□ -1.31
XRN1-213ENST00000489241 BACH2Q9BYV9 841 aa6.86□□□□□ -1.31
XRN1-213ENST00000489241 LGR6Q9HBX8 967 aa6.86□□□□□ -1.31
XRN1-213ENST00000489241 AKAP2Q9Y2D5 859 aa6.86□□□□□ -1.31
XRN1-213ENST00000489241 USP17L7P0C7H9 530 aa6.85□□□□□ -1.31
XRN1-213ENST00000489241 CYP27C1Q4G0S4 372 aa6.85□□□□□ -1.31
XRN1-213ENST00000489241 CBLL1Q75N03 491 aa6.85□□□□□ -1.31
XRN1-213ENST00000489241 SULF2Q8IWU5 870 aa6.85□□□□□ -1.31
XRN1-213ENST00000489241 CDK5R2Q13319 367 aa6.84□□□□□ -1.31
XRN1-213ENST00000489241 SMYD4Q8IYR2 804 aaPredicted RBP6.84□□□□□ -1.31
XRN1-213ENST00000489241 KCNB2Q92953 911 aa6.84□□□□□ -1.31
XRN1-213ENST00000489241 PAK6Q9NQU5 681 aaPredicted RBP6.84□□□□□ -1.31
XRN1-213ENST00000489241 DISC1Q9NRI5 854 aa6.84□□□□□ -1.31
XRN1-213ENST00000489241 FAM87AP0C7U9 286 aa6.83□□□□□ -1.32
XRN1-213ENST00000489241 NME2P22392 152 aa6.83□□□□□ -1.32
XRN1-213ENST00000489241 TTLL4Q14679 1199 aa6.83□□□□□ -1.32
XRN1-213ENST00000489241 TAF1CQ15572 869 aaPredicted RBP6.83□□□□□ -1.32
XRN1-213ENST00000489241 C8orf37Q96NL8 207 aa6.83□□□□□ -1.32
XRN1-213ENST00000489241 PPM1HQ9ULR3 514 aa6.83□□□□□ -1.32
XRN1-213ENST00000489241 HCLS1P14317 486 aaPredicted RBP6.82□□□□□ -1.32
XRN1-213ENST00000489241 STK11IPQ8N1F8 1099 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 C3orf58Q8NDZ4 430 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 STK35Q8TDR2 534 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 ANKRD24Q8TF21 1146 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 BCL7CQ8WUZ0 217 aaPredicted RBP6.82□□□□□ -1.32
XRN1-213ENST00000489241 MISP3Q96FF7 219 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 CRELD1Q96HD1 420 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 EMILIN2Q9BXX0 1053 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 CEP44Q9C0F1 390 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 TTF2Q9UNY4 1162 aaKnown RBP6.82□□□□□ -1.32
XRN1-213ENST00000489241 SLC5A6Q9Y289 635 aa6.82□□□□□ -1.32
XRN1-213ENST00000489241 SCAMP3O14828 347 aaKnown RBP6.81□□□□□ -1.32
XRN1-213ENST00000489241 RNGTTO60942 597 aaKnown RBP6.81□□□□□ -1.32
XRN1-213ENST00000489241 ARNTP27540 789 aa6.81□□□□□ -1.32
XRN1-213ENST00000489241 MAP1SQ66K74 1059 aaPredicted RBP6.81□□□□□ -1.32
XRN1-213ENST00000489241 USP31Q70CQ4 1352 aa6.81□□□□□ -1.32
XRN1-213ENST00000489241 SHROOM4Q9ULL8 1493 aa6.8□□□□□ -1.32
XRN1-213ENST00000489241 NEFMP07197 916 aa6.8□□□□□ -1.32
XRN1-213ENST00000489241 ITGB5P18084 799 aa6.8□□□□□ -1.32
XRN1-213ENST00000489241 ST13P50502 369 aaKnown RBP6.8□□□□□ -1.32
XRN1-213ENST00000489241 ERVK-24P63145 666 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms